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ATCC64974_39000-T1, ATCC64974_39000-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_39000-T1
Unique NameATCC64974_39000-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000005.1:1915969..1917758+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_39000-T1 ID=ATCC64974_39000-T1|Name=ATCC64974_39000-T1|organism=Aspergillus niger N402|type=mRNA|length=1790bp|location=Sequence derived from alignment at OGUI01000005.1:1915969..1917758+ (Aspergillus niger N402)
ATGTCCACGATAACCACCCCGGCCGGTCCTCCGGTGGCCCTTGATACAAT
CACCCAGAATATCGGCAATACTCCCTTGGTCAAGCTTAACAGGATTCCGC
GCAGCCTGGGAATCGAAGCCACCGTCTATGCCAAATGTGAATATTTCAAT
GCTGGCGGGAGCGTGAAGGATCGTATCGCTTTGCGCATGATTGAAGAAGC
GGAACGATCTGGGCGCATCAAGCCTGGCGATACTTTGATCGAACCTACCA
GCGGTAACACGTAGGTCCCGTTGCGCAAATCACGCACATGATCCTCAAAG
AAGATGCCCTAACTCCTAATTTCTATCACTAGCGGTATTGGTCTAGCTCT
CGTTGCGGCCGTCAAGGGTTAGTTGAACCAGCATTTCGACGTTGGGATCT
TGTTGGCTAATAACCATCTCGGAGTATGCAGGCTACAAGACTATCATCAC
TCTGCCTGAAAAGATGTCTGCCGAGAAAGTATCAGTATTGCGAGCGTTGA
ATGCTACCATTATCCGTACTCCCAACGAAGCGGCATTCGACTCTCCGGAA
TCCCACATTGGCGTCGCAAAGCGCTTGGAGAAAGAGCTTCCGAATGCGCA
CATTTTGGACCAGTATGGAAACGTGAACAACCCACTCGCCCACGAGCTTG
GAACCGCGGAGGAAATTTGGGTACAGACAGAAGGCCGGATCAGTGCGGTT
GTCGCCGGTGCTGGCACTGGTGGAACGATTACTGGTATCTCTCGCGGCCT
CAAGAAGCACAACCCCGATATCCAAGTCATTGCAGCAGATCCTCATGGGT
CCATTTTGGCACTTCCTGCGGCGCTGAACGACGAGCATCTGAACGAGCCT
TACAAGGTCGAGGGTATCGGATATGATTTCATTCCCGAGGTTCTGGATCG
CCAGGCAGTTGATAAGTGGTACAAGACCGCCGACAAAGAGTCGTTCCAAT
ACTCTCGGCGGTTAATCGCCGAGGAAGGTCTTCTGGTTGGTGGAAGCAGT
GGAAGTGCCATCTCCGCTTTGGCGCAAGCCGCGAAGGATAATAGATTCAA
GAAGGATGACGTGGTTGTCGTCGTCCTGCCCGACAGCATCAGAAGTTACC
TTACCAAGGTAAGTTAATCTATACTTTTTGGCTGCTTCTAATGAGTCCTC
TAACATATCACAGTTTGCCGATGACGACTGGCTCGCTGCGAATGGCCTTC
TGTCGGCGACCCCTGAGCCCACATCCTTCCCAGCGCTACAGCCGCAGGCG
AAGAGCGATGCCTTCGCCGGCTCACAGGTCAAGGCTTTGAGGTTGAAGCC
GATAACTACAGTCCGATCCAATATCCCCTGTGAAATTGCCATCGAAATGA
TGCGCGACAGAGGTTTCGACCAGCTGCCCGTTCTTGCTCCTTCCGGGAAG
AAGCTTGTCGGACTGCTTACCCTTGGAAATGTTCTCAGCCGGCTGACACA
TGGACGTGCTACCGGGAAGAGCCCAGTTGCTGATGTCATGTTCGATTTCA
GCAGGATTCCGGAAATTGTCACGGATCCCAGAGATATGGGGCTTGCCAGC
TCGCAGGCCGGCCAGAACGGTAGTGCTAACGCGAAGCCTCATATCAGAGA
TCGGAAATTTGTGGAGATTACCATGGACACGCCTTTGAGCGTTCTCAACC
GATTCCTTGAATGGAACAGTGCAGCTGTTGTCACTGAGCGAGATGACCAA
GGAGCAATGAAGCCGGTTGCGGTGGCGACCAAGGTCGATCTCCTCACCTG
GATGCTTCACAACGACAACAGTGGCACCTCAGGTAATTAA
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Coding sequence (CDS) from alignment at OGUI01000005.1:1915969..1917758+

>ATCC64974_39000-T1 ID=ATCC64974_39000-T1|Name=ATCC64974_39000-T1|organism=Aspergillus niger N402|type=CDS|length=6396bp|location=Sequence derived from alignment at OGUI01000005.1:1915969..1917758+ (Aspergillus niger N402)
ATGTCCACGATAACCACCCCGGCCGGTCCTCCGGTGGCCCTTGATACAAT
CACCCAGAATATCGGCAATACTCCCTTGGTCAAGCTTAACAGGATTCCGC
GCAGCCTGGGAATCGAAGCCACCGTCTATGCCAAATGTGAATATTTCAAT
GCTGGCGGGAGCGTGAAGGATCGTATCGCTTTGCGCATGATTGAAGAAGC
GGAACGATCTGGGCGCATCAAGCCTGGCGATACTTTGATCGAACCTACCA
GCGGTAACACCGGTATTGGTCTAGCTCTCGTTGCGGCCGTCAAGGGCTAC
AAGACTATCATCACTCTGCCTGAAAAGATGTCTGCCGAGAAAGTATCAGT
ATTGCGAGCGTTGAATGCTACCATTATCCGTACTCCCAACGAAGCGGCAT
TCGACTCTCCGGAATCCCACATTGGCGTCGCAAAGCGCTTGGAGAAAGAG
CTTCCGAATGCGCACATTTTGGACCAGTATGGAAACGTGAACAACCCACT
CGCCCACGAGCTTGGAACCGCGGAGGAAATTTGGGTACAGACAGAAGGCC
GGATCAGTGCGGTTGTCGCCGGTGCTGGCACTGGTGGAACGATTACTGGT
ATCTCTCGCGGCCTCAAGAAGCACAACCCCGATATCCAAGTCATTGCAGC
AGATCCTCATGGGTCCATTTTGGCACTTCCTGCGGCGCTGAACGACGAGC
ATCTGAACGAGCCTTACAAGGTCGAGGGTATCGGATATGATTTCATTCCC
GAGGTTCTGGATCGCCAGGCAGTTGATAAGTGGTACAAGACCGCCGACAA
AGAGTCGTTCCAATACTCTCGGCGGTTAATCGCCGAGGAAGGTCTTCTGG
TTGGTGGAAGCAGTGGAAGTGCCATCTCCGCTTTGGCGCAAGCCGCGAAG
GATAATAGATTCAAGAAGGATGACGTGGTTGTCGTCGTCCTGCCCGACAG
CATCAGAAGTTACCTTACCAAGTTTGCCGATGACGACTGGCTCGCTGCGA
ATGGCCTTCTGTCGGCGACCCCTGAGCCCACATCCTTCCCAGCGCTACAG
CCGCAGGCGAAGAGCGATGCCTTCGCCGGCTCACAGGTCAAGGCTTTGAG
GTTGAAGCCGATAACTACAGTCCGATCCAATATCCCCTGTGAAATTGCCA
TCGAAATGATGCGCGACAGAGGTTTCGACCAGCTGCCCGTTCTTGCTCCT
TCCGGGAAGAAGCTTGTCGGACTGCTTACCCTTGGAAATGTTCTCAGCCG
GCTGACACATGGACGTGCTACCGGGAAGAGCCCAGTTGCTGATGTCATGT
TCGATTTCAGCAGGATTCCGGAAATTGTCACGGATCCCAGAGATATGGGG
CTTGCCAGCTCGCAGGCCGGCCAGAACGGTAGTGCTAACGCGAAGCCTCA
TATCAGAGATCGGAAATTTGTGGAGATTACCATGGACACGCCTTTGAGCG
TTCTCAACCGATTCCTTGAATGGAACAGTGCAGCTGTTGTCACTGAGCGA
GATGACCAAGGAGCAATGAAGCCGGTTGCGGTGGCGACCAAGGTCGATCT
CCTCACCTGGATGCTTCACAACGACAACAGTGGCACCTCAGGTAATTAAA
TGTCCACGATAACCACCCCGGCCGGTCCTCCGGTGGCCCTTGATACAATC
ACCCAGAATATCGGCAATACTCCCTTGGTCAAGCTTAACAGGATTCCGCG
CAGCCTGGGAATCGAAGCCACCGTCTATGCCAAATGTGAATATTTCAATG
CTGGCGGGAGCGTGAAGGATCGTATCGCTTTGCGCATGATTGAAGAAGCG
GAACGATCTGGGCGCATCAAGCCTGGCGATACTTTGATCGAACCTACCAG
CGGTAACACCGGTATTGGTCTAGCTCTCGTTGCGGCCGTCAAGGGCTACA
AGACTATCATCACTCTGCCTGAAAAGATGTCTGCCGAGAAAGTATCAGTA
TTGCGAGCGTTGAATGCTACCATTATCCGTACTCCCAACGAAGCGGCATT
CGACTCTCCGGAATCCCACATTGGCGTCGCAAAGCGCTTGGAGAAAGAGC
TTCCGAATGCGCACATTTTGGACCAGTATGGAAACGTGAACAACCCACTC
GCCCACGAGCTTGGAACCGCGGAGGAAATTTGGGTACAGACAGAAGGCCG
GATCAGTGCGGTTGTCGCCGGTGCTGGCACTGGTGGAACGATTACTGGTA
TCTCTCGCGGCCTCAAGAAGCACAACCCCGATATCCAAGTCATTGCAGCA
GATCCTCATGGGTCCATTTTGGCACTTCCTGCGGCGCTGAACGACGAGCA
TCTGAACGAGCCTTACAAGGTCGAGGGTATCGGATATGATTTCATTCCCG
AGGTTCTGGATCGCCAGGCAGTTGATAAGTGGTACAAGACCGCCGACAAA
GAGTCGTTCCAATACTCTCGGCGGTTAATCGCCGAGGAAGGTCTTCTGGT
TGGTGGAAGCAGTGGAAGTGCCATCTCCGCTTTGGCGCAAGCCGCGAAGG
ATAATAGATTCAAGAAGGATGACGTGGTTGTCGTCGTCCTGCCCGACAGC
ATCAGAAGTTACCTTACCAAGTTTGCCGATGACGACTGGCTCGCTGCGAA
TGGCCTTCTGTCGGCGACCCCTGAGCCCACATCCTTCCCAGCGCTACAGC
CGCAGGCGAAGAGCGATGCCTTCGCCGGCTCACAGGTCAAGGCTTTGAGG
TTGAAGCCGATAACTACAGTCCGATCCAATATCCCCTGTGAAATTGCCAT
CGAAATGATGCGCGACAGAGGTTTCGACCAGCTGCCCGTTCTTGCTCCTT
CCGGGAAGAAGCTTGTCGGACTGCTTACCCTTGGAAATGTTCTCAGCCGG
CTGACACATGGACGTGCTACCGGGAAGAGCCCAGTTGCTGATGTCATGTT
CGATTTCAGCAGGATTCCGGAAATTGTCACGGATCCCAGAGATATGGGGC
TTGCCAGCTCGCAGGCCGGCCAGAACGGTAGTGCTAACGCGAAGCCTCAT
ATCAGAGATCGGAAATTTGTGGAGATTACCATGGACACGCCTTTGAGCGT
TCTCAACCGATTCCTTGAATGGAACAGTGCAGCTGTTGTCACTGAGCGAG
ATGACCAAGGAGCAATGAAGCCGGTTGCGGTGGCGACCAAGGTCGATCTC
CTCACCTGGATGCTTCACAACGACAACAGTGGCACCTCAGGTAATTAAAT
GTCCACGATAACCACCCCGGCCGGTCCTCCGGTGGCCCTTGATACAATCA
CCCAGAATATCGGCAATACTCCCTTGGTCAAGCTTAACAGGATTCCGCGC
AGCCTGGGAATCGAAGCCACCGTCTATGCCAAATGTGAATATTTCAATGC
TGGCGGGAGCGTGAAGGATCGTATCGCTTTGCGCATGATTGAAGAAGCGG
AACGATCTGGGCGCATCAAGCCTGGCGATACTTTGATCGAACCTACCAGC
GGTAACACCGGTATTGGTCTAGCTCTCGTTGCGGCCGTCAAGGGCTACAA
GACTATCATCACTCTGCCTGAAAAGATGTCTGCCGAGAAAGTATCAGTAT
TGCGAGCGTTGAATGCTACCATTATCCGTACTCCCAACGAAGCGGCATTC
GACTCTCCGGAATCCCACATTGGCGTCGCAAAGCGCTTGGAGAAAGAGCT
TCCGAATGCGCACATTTTGGACCAGTATGGAAACGTGAACAACCCACTCG
CCCACGAGCTTGGAACCGCGGAGGAAATTTGGGTACAGACAGAAGGCCGG
ATCAGTGCGGTTGTCGCCGGTGCTGGCACTGGTGGAACGATTACTGGTAT
CTCTCGCGGCCTCAAGAAGCACAACCCCGATATCCAAGTCATTGCAGCAG
ATCCTCATGGGTCCATTTTGGCACTTCCTGCGGCGCTGAACGACGAGCAT
CTGAACGAGCCTTACAAGGTCGAGGGTATCGGATATGATTTCATTCCCGA
GGTTCTGGATCGCCAGGCAGTTGATAAGTGGTACAAGACCGCCGACAAAG
AGTCGTTCCAATACTCTCGGCGGTTAATCGCCGAGGAAGGTCTTCTGGTT
GGTGGAAGCAGTGGAAGTGCCATCTCCGCTTTGGCGCAAGCCGCGAAGGA
TAATAGATTCAAGAAGGATGACGTGGTTGTCGTCGTCCTGCCCGACAGCA
TCAGAAGTTACCTTACCAAGTTTGCCGATGACGACTGGCTCGCTGCGAAT
GGCCTTCTGTCGGCGACCCCTGAGCCCACATCCTTCCCAGCGCTACAGCC
GCAGGCGAAGAGCGATGCCTTCGCCGGCTCACAGGTCAAGGCTTTGAGGT
TGAAGCCGATAACTACAGTCCGATCCAATATCCCCTGTGAAATTGCCATC
GAAATGATGCGCGACAGAGGTTTCGACCAGCTGCCCGTTCTTGCTCCTTC
CGGGAAGAAGCTTGTCGGACTGCTTACCCTTGGAAATGTTCTCAGCCGGC
TGACACATGGACGTGCTACCGGGAAGAGCCCAGTTGCTGATGTCATGTTC
GATTTCAGCAGGATTCCGGAAATTGTCACGGATCCCAGAGATATGGGGCT
TGCCAGCTCGCAGGCCGGCCAGAACGGTAGTGCTAACGCGAAGCCTCATA
TCAGAGATCGGAAATTTGTGGAGATTACCATGGACACGCCTTTGAGCGTT
CTCAACCGATTCCTTGAATGGAACAGTGCAGCTGTTGTCACTGAGCGAGA
TGACCAAGGAGCAATGAAGCCGGTTGCGGTGGCGACCAAGGTCGATCTCC
TCACCTGGATGCTTCACAACGACAACAGTGGCACCTCAGGTAATTAAATG
TCCACGATAACCACCCCGGCCGGTCCTCCGGTGGCCCTTGATACAATCAC
CCAGAATATCGGCAATACTCCCTTGGTCAAGCTTAACAGGATTCCGCGCA
GCCTGGGAATCGAAGCCACCGTCTATGCCAAATGTGAATATTTCAATGCT
GGCGGGAGCGTGAAGGATCGTATCGCTTTGCGCATGATTGAAGAAGCGGA
ACGATCTGGGCGCATCAAGCCTGGCGATACTTTGATCGAACCTACCAGCG
GTAACACCGGTATTGGTCTAGCTCTCGTTGCGGCCGTCAAGGGCTACAAG
ACTATCATCACTCTGCCTGAAAAGATGTCTGCCGAGAAAGTATCAGTATT
GCGAGCGTTGAATGCTACCATTATCCGTACTCCCAACGAAGCGGCATTCG
ACTCTCCGGAATCCCACATTGGCGTCGCAAAGCGCTTGGAGAAAGAGCTT
CCGAATGCGCACATTTTGGACCAGTATGGAAACGTGAACAACCCACTCGC
CCACGAGCTTGGAACCGCGGAGGAAATTTGGGTACAGACAGAAGGCCGGA
TCAGTGCGGTTGTCGCCGGTGCTGGCACTGGTGGAACGATTACTGGTATC
TCTCGCGGCCTCAAGAAGCACAACCCCGATATCCAAGTCATTGCAGCAGA
TCCTCATGGGTCCATTTTGGCACTTCCTGCGGCGCTGAACGACGAGCATC
TGAACGAGCCTTACAAGGTCGAGGGTATCGGATATGATTTCATTCCCGAG
GTTCTGGATCGCCAGGCAGTTGATAAGTGGTACAAGACCGCCGACAAAGA
GTCGTTCCAATACTCTCGGCGGTTAATCGCCGAGGAAGGTCTTCTGGTTG
GTGGAAGCAGTGGAAGTGCCATCTCCGCTTTGGCGCAAGCCGCGAAGGAT
AATAGATTCAAGAAGGATGACGTGGTTGTCGTCGTCCTGCCCGACAGCAT
CAGAAGTTACCTTACCAAGTTTGCCGATGACGACTGGCTCGCTGCGAATG
GCCTTCTGTCGGCGACCCCTGAGCCCACATCCTTCCCAGCGCTACAGCCG
CAGGCGAAGAGCGATGCCTTCGCCGGCTCACAGGTCAAGGCTTTGAGGTT
GAAGCCGATAACTACAGTCCGATCCAATATCCCCTGTGAAATTGCCATCG
AAATGATGCGCGACAGAGGTTTCGACCAGCTGCCCGTTCTTGCTCCTTCC
GGGAAGAAGCTTGTCGGACTGCTTACCCTTGGAAATGTTCTCAGCCGGCT
GACACATGGACGTGCTACCGGGAAGAGCCCAGTTGCTGATGTCATGTTCG
ATTTCAGCAGGATTCCGGAAATTGTCACGGATCCCAGAGATATGGGGCTT
GCCAGCTCGCAGGCCGGCCAGAACGGTAGTGCTAACGCGAAGCCTCATAT
CAGAGATCGGAAATTTGTGGAGATTACCATGGACACGCCTTTGAGCGTTC
TCAACCGATTCCTTGAATGGAACAGTGCAGCTGTTGTCACTGAGCGAGAT
GACCAAGGAGCAATGAAGCCGGTTGCGGTGGCGACCAAGGTCGATCTCCT
CACCTGGATGCTTCACAACGACAACAGTGGCACCTCAGGTAATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0004122cystathionine beta-synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0006535cysteine biosynthetic process from serine
GO:0019343cysteine biosynthetic process via cystathionine
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_39000ATCC64974_39000Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_39000-T1.exon1ATCC64974_39000-T1.exon1Aspergillus niger N402exon
ATCC64974_39000-T1.exon2ATCC64974_39000-T1.exon2Aspergillus niger N402exon
ATCC64974_39000-T1.exon3ATCC64974_39000-T1.exon3Aspergillus niger N402exon
ATCC64974_39000-T1.exon4ATCC64974_39000-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_39000-T1.cdsATCC64974_39000-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_39000-T1ATCC64974_39000-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036052
DBxrefInterPro:IPR001216
DBxrefInterPro:IPR005857
DBxrefInterPro:IPR001926
DBxrefInterPro:IPR000644
DBxrefPFAM:PF00291
DBxrefPFAM:PF00571
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000005.1supercontigOGUI01000005.1:1915969..1917758 +
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