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ATCC64974_39280-T1, ATCC64974_39280-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_39280-T1
Unique NameATCC64974_39280-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000006.1:97800..98705+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_39280-T1 ID=ATCC64974_39280-T1|Name=ATCC64974_39280-T1|organism=Aspergillus niger N402|type=mRNA|length=906bp|location=Sequence derived from alignment at OGUI01000006.1:97800..98705+ (Aspergillus niger N402)
ATGTCATCTGCAACAAAAGCATCTAGGATTGGGGAAGAGTAAGTTGTTCA
TTCGCTTCACTTGACCAGTAACCCCTTACTAACCTCCTGACCTTGACAGG
CTGTGGAAGTCAGTAAGCTGCATGCGTATAGTTGGCGCTCGAACACCCCT
CAGGAGACGAGCGAAGCCGGCTTGGGATGGACAGGCAACTGACATACACC
CGACATTACTAGGACGAGAGTTGACAAAGTGAACGCCGAGTTGGTAACAT
TAACTTACGGTACAATTGTCGCGCAACTTTGCCAGGACTACGATGGAAAT
TACCAAGAAGTGAACAAGCAACTGGAGAAGATGGGTTACAATATTGGAAT
GCGACTTATCGAGGACTTTTTGGCCAAGTCGGGCGTCGGCCGATGTGCTA
ATTTCCGGGAAACGGCGGATATGATCGCAAAGGTATGTTGAGGCCAACAG
GTGGAGTAATTGGTCGAAAGTATATGGGCTTCTGTGGGCTGACGAGTTTA
ATGCCCACTGCAGGTTGGGTTCAGGATCTTCCTCAACATCGCACCCACCG
TCACCAACTGGACGAGTGACAACAACCAATTCTCTCTCATATTTGAAGAA
AACCCGTTGGCAGATTTTGTTGAGTTGCCCGATGACGGACGGGCTCAAGA
TGAGCTGTGGTTTTCCAATATCCTCTGTGGAGTTCTGCGGGGTGCATTGG
AGATGGTAAGACGGCGTACTGCAGGGAGTTGATCTGTTCTCTGCTAGCCA
CTTCCATGCATGTATTTGTGCTAATTCTGGGAACAGGTGCAAATGCAGAT
CGAGGCGCATTTTGTGAGCGACGTTTTGCGGGGCGATGACACAACGGAAA
TGCGGGTGTCACTTGTACGGTACATTGAGGATGAGATGCCACCCGATGAG
GAGTAA
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Coding sequence (CDS) from alignment at OGUI01000006.1:97800..98705+

>ATCC64974_39280-T1 ID=ATCC64974_39280-T1|Name=ATCC64974_39280-T1|organism=Aspergillus niger N402|type=CDS|length=2550bp|location=Sequence derived from alignment at OGUI01000006.1:97800..98705+ (Aspergillus niger N402)
ATGTCATCTGCAACAAAAGCATCTAGGATTGGGGAAGAGCTGTGGAAGTC
AGACTACGATGGAAATTACCAAGAAGTGAACAAGCAACTGGAGAAGATGG
GTTACAATATTGGAATGCGACTTATCGAGGACTTTTTGGCCAAGTCGGGC
GTCGGCCGATGTGCTAATTTCCGGGAAACGGCGGATATGATCGCAAAGGT
TGGGTTCAGGATCTTCCTCAACATCGCACCCACCGTCACCAACTGGACGA
GTGACAACAACCAATTCTCTCTCATATTTGAAGAAAACCCGTTGGCAGAT
TTTGTTGAGTTGCCCGATGACGGACGGGCTCAAGATGAGCTGTGGTTTTC
CAATATCCTCTGTGGAGTTCTGCGGGGTGCATTGGAGATGGTGCAAATGC
AGATCGAGGCGCATTTTGTGAGCGACGTTTTGCGGGGCGATGACACAACG
GAAATGCGGGTGTCACTTGTACGGTACATTGAGGATGAGATGCCACCCGA
TGAGGAGTAAATGTCATCTGCAACAAAAGCATCTAGGATTGGGGAAGAGC
TGTGGAAGTCAGACTACGATGGAAATTACCAAGAAGTGAACAAGCAACTG
GAGAAGATGGGTTACAATATTGGAATGCGACTTATCGAGGACTTTTTGGC
CAAGTCGGGCGTCGGCCGATGTGCTAATTTCCGGGAAACGGCGGATATGA
TCGCAAAGGTTGGGTTCAGGATCTTCCTCAACATCGCACCCACCGTCACC
AACTGGACGAGTGACAACAACCAATTCTCTCTCATATTTGAAGAAAACCC
GTTGGCAGATTTTGTTGAGTTGCCCGATGACGGACGGGCTCAAGATGAGC
TGTGGTTTTCCAATATCCTCTGTGGAGTTCTGCGGGGTGCATTGGAGATG
GTGCAAATGCAGATCGAGGCGCATTTTGTGAGCGACGTTTTGCGGGGCGA
TGACACAACGGAAATGCGGGTGTCACTTGTACGGTACATTGAGGATGAGA
TGCCACCCGATGAGGAGTAAATGTCATCTGCAACAAAAGCATCTAGGATT
GGGGAAGAGCTGTGGAAGTCAGACTACGATGGAAATTACCAAGAAGTGAA
CAAGCAACTGGAGAAGATGGGTTACAATATTGGAATGCGACTTATCGAGG
ACTTTTTGGCCAAGTCGGGCGTCGGCCGATGTGCTAATTTCCGGGAAACG
GCGGATATGATCGCAAAGGTTGGGTTCAGGATCTTCCTCAACATCGCACC
CACCGTCACCAACTGGACGAGTGACAACAACCAATTCTCTCTCATATTTG
AAGAAAACCCGTTGGCAGATTTTGTTGAGTTGCCCGATGACGGACGGGCT
CAAGATGAGCTGTGGTTTTCCAATATCCTCTGTGGAGTTCTGCGGGGTGC
ATTGGAGATGGTGCAAATGCAGATCGAGGCGCATTTTGTGAGCGACGTTT
TGCGGGGCGATGACACAACGGAAATGCGGGTGTCACTTGTACGGTACATT
GAGGATGAGATGCCACCCGATGAGGAGTAAATGTCATCTGCAACAAAAGC
ATCTAGGATTGGGGAAGAGCTGTGGAAGTCAGACTACGATGGAAATTACC
AAGAAGTGAACAAGCAACTGGAGAAGATGGGTTACAATATTGGAATGCGA
CTTATCGAGGACTTTTTGGCCAAGTCGGGCGTCGGCCGATGTGCTAATTT
CCGGGAAACGGCGGATATGATCGCAAAGGTTGGGTTCAGGATCTTCCTCA
ACATCGCACCCACCGTCACCAACTGGACGAGTGACAACAACCAATTCTCT
CTCATATTTGAAGAAAACCCGTTGGCAGATTTTGTTGAGTTGCCCGATGA
CGGACGGGCTCAAGATGAGCTGTGGTTTTCCAATATCCTCTGTGGAGTTC
TGCGGGGTGCATTGGAGATGGTGCAAATGCAGATCGAGGCGCATTTTGTG
AGCGACGTTTTGCGGGGCGATGACACAACGGAAATGCGGGTGTCACTTGT
ACGGTACATTGAGGATGAGATGCCACCCGATGAGGAGTAAATGTCATCTG
CAACAAAAGCATCTAGGATTGGGGAAGAGCTGTGGAAGTCAGACTACGAT
GGAAATTACCAAGAAGTGAACAAGCAACTGGAGAAGATGGGTTACAATAT
TGGAATGCGACTTATCGAGGACTTTTTGGCCAAGTCGGGCGTCGGCCGAT
GTGCTAATTTCCGGGAAACGGCGGATATGATCGCAAAGGTTGGGTTCAGG
ATCTTCCTCAACATCGCACCCACCGTCACCAACTGGACGAGTGACAACAA
CCAATTCTCTCTCATATTTGAAGAAAACCCGTTGGCAGATTTTGTTGAGT
TGCCCGATGACGGACGGGCTCAAGATGAGCTGTGGTTTTCCAATATCCTC
TGTGGAGTTCTGCGGGGTGCATTGGAGATGGTGCAAATGCAGATCGAGGC
GCATTTTGTGAGCGACGTTTTGCGGGGCGATGACACAACGGAAATGCGGG
TGTCACTTGTACGGTACATTGAGGATGAGATGCCACCCGATGAGGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030008TRAPP complex
Vocabulary: Biological Process
TermDefinition
GO:0048193Golgi vesicle transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TRAPPC3ATCC64974_39280Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_39280-T1ATCC64974_39280-T1-proteinAspergillus niger N402polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_39280-T1.exon1ATCC64974_39280-T1.exon1Aspergillus niger N402exon
ATCC64974_39280-T1.exon2ATCC64974_39280-T1.exon2Aspergillus niger N402exon
ATCC64974_39280-T1.exon3ATCC64974_39280-T1.exon3Aspergillus niger N402exon
ATCC64974_39280-T1.exon4ATCC64974_39280-T1.exon4Aspergillus niger N402exon
ATCC64974_39280-T1.exon5ATCC64974_39280-T1.exon5Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_39280-T1.cdsATCC64974_39280-T1.cdsAspergillus niger N402CDS


Properties
Property NameValue
NoteBUSCO:EOG09264OM7
DBxrefInterPro:IPR024096
DBxrefInterPro:IPR016721
DBxrefInterPro:IPR007194
DBxrefPFAM:PF04051
ProductTrafficking protein particle complex subunit 3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000006.1supercontigOGUI01000006.1:97800..98705 +
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