|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000006.1:138553..139304- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_39390-T1 ID=ATCC64974_39390-T1|Name=ATCC64974_39390-T1|organism=Aspergillus niger N402|type=mRNA|length=752bp|location=Sequence derived from alignment at OGUI01000006.1:138553..139304- (Aspergillus niger N402)
ATGGCCGACGCTCCCGTTACCCTGCGGACTCGCAAGTTCATCCGCAACCC
CCTGCTTGCTCGCAAGCAGATGGTCGTGTAAGCTCCCTTCACCATCGAGC
TGGAAGGAAAGGAAGGAGGAAAGGGAAAGGAGAATACAAGCGGATACAAC
AAGAGGAGGATTTAGGAGGAGGAAATTTGTCCGGATGGAAATGATCGATT
TTTGAGCACACTCCAAGTATATACTAGAATATATTTTGTGTGTGTGTTTC
AATATCGATTATTGAAATTCGGACATATTGGACAGACAACCTGGATATGG
GGCAAACCAGCAAAGGAATAAACGGCATGCTGATGATTGATTTTCTTTTC
CAACAGGGATGTCCTCCACCCCAACCGCGCCAACGTCTCCAAGGACGAGC
TCCGCGACAAGCTCGCCGACCTGTACAAGTCCAACAAGGACCAGGTCTCC
GTCTTCGGTTTCCGTACGCAGTACGGTGGTGGTAAGAGCACTGGCTTCGC
TCTCATCTACGACTCCCAGGAGGCCCTGAAGAAGTTCGAGCCCCTCTACC
GTCTGGTCCGCATCGGTGCTGGCACAAAGGTCGAGAAGCCCAGCAGACAG
CAGCGTATGTTCACACCCACCTATACTATTTCATCAATCATTCGAAAACC
GAACCAATACTCACAATCCCTACAGGCAAGCAACGGAAGAACCGCTCCAA
GAAGTTCCGCGGTACCGCCAAGACCAAGGGCCCCAAGAAGAACAAGGACT
AA back to topCoding sequence (CDS) from alignment at OGUI01000006.1:138553..139304- >ATCC64974_39390-T1 ID=ATCC64974_39390-T1|Name=ATCC64974_39390-T1|organism=Aspergillus niger N402|type=CDS|length=1206bp|location=Sequence derived from alignment at OGUI01000006.1:138553..139304- (Aspergillus niger N402)
GCAAGCAACGGAAGAACCGCTCCAAGAAGTTCCGCGGTACCGCCAAGACC
AAGGGCCCCAAGAAGAACAAGGACTAAGGATGTCCTCCACCCCAACCGCG
CCAACGTCTCCAAGGACGAGCTCCGCGACAAGCTCGCCGACCTGTACAAG
TCCAACAAGGACCAGGTCTCCGTCTTCGGTTTCCGTACGCAGTACGGTGG
TGGTAAGAGCACTGGCTTCGCTCTCATCTACGACTCCCAGGAGGCCCTGA
AGAAGTTCGAGCCCCTCTACCGTCTGGTCCGCATCGGTGCTGGCACAAAG
GTCGAGAAGCCCAGCAGACAGCAGCATGGCCGACGCTCCCGTTACCCTGC
GGACTCGCAAGTTCATCCGCAACCCCCTGCTTGCTCGCAAGCAGATGGTC
GTGCAAGCAACGGAAGAACCGCTCCAAGAAGTTCCGCGGTACCGCCAAGA
CCAAGGGCCCCAAGAAGAACAAGGACTAAGGATGTCCTCCACCCCAACCG
CGCCAACGTCTCCAAGGACGAGCTCCGCGACAAGCTCGCCGACCTGTACA
AGTCCAACAAGGACCAGGTCTCCGTCTTCGGTTTCCGTACGCAGTACGGT
GGTGGTAAGAGCACTGGCTTCGCTCTCATCTACGACTCCCAGGAGGCCCT
GAAGAAGTTCGAGCCCCTCTACCGTCTGGTCCGCATCGGTGCTGGCACAA
AGGTCGAGAAGCCCAGCAGACAGCAGCATGGCCGACGCTCCCGTTACCCT
GCGGACTCGCAAGTTCATCCGCAACCCCCTGCTTGCTCGCAAGCAGATGG
TCGTGCAAGCAACGGAAGAACCGCTCCAAGAAGTTCCGCGGTACCGCCAA
GACCAAGGGCCCCAAGAAGAACAAGGACTAAGGATGTCCTCCACCCCAAC
CGCGCCAACGTCTCCAAGGACGAGCTCCGCGACAAGCTCGCCGACCTGTA
CAAGTCCAACAAGGACCAGGTCTCCGTCTTCGGTTTCCGTACGCAGTACG
GTGGTGGTAAGAGCACTGGCTTCGCTCTCATCTACGACTCCCAGGAGGCC
CTGAAGAAGTTCGAGCCCCTCTACCGTCTGGTCCGCATCGGTGCTGGCAC
AAAGGTCGAGAAGCCCAGCAGACAGCAGCATGGCCGACGCTCCCGTTACC
CTGCGGACTCGCAAGTTCATCCGCAACCCCCTGCTTGCTCGCAAGCAGAT
GGTCGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_39390-T1 | ATCC64974_39390-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012678 |
| DBxref | InterPro:IPR018098 |
| DBxref | InterPro:IPR001976 |
| DBxref | PFAM:PF01282 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000006.1 | supercontig | OGUI01000006.1:138553..139304 - |
|
