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ATCC64974_39990-T1, ATCC64974_39990-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_39990-T1
Unique NameATCC64974_39990-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000006.1:345213..346424-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_39990-T1 ID=ATCC64974_39990-T1|Name=ATCC64974_39990-T1|organism=Aspergillus niger N402|type=mRNA|length=1212bp|location=Sequence derived from alignment at OGUI01000006.1:345213..346424- (Aspergillus niger N402)
ATGAGTGTATGTCGAGACCCAGAACGTCATTATCTTGACCCTCTCCGCTA
CCCCACCCCTTATTATTCACCACCTGCGCATCGTCAAATAGCCTGCTAAC
TCGCCGATTTTCTAGTACGGTGGAAACCAGGGTGGCTACGGCCAGTACAA
CCCCTATGGCCAGCAAGATGCCAACCCCTACAGCGACGCCAATGCCATGG
AGCAGGGCAACGGTAGCTACGGTAAGCGCACCATGTCCAGTACCCTCCCA
GCCTGACCCGACGATTGCCTAACATGCGTTCGCATATCAGAAATGGGCTC
TTACAACCAGCCTGCGGACGCGACGACGCTGCTGAACAAGTGCAGAGAGA
TCAACGACGGTATTGCGGATCTCCGCGCCAAGCGCGAGGGCCAGCTTGCG
GCCGCCCAGAACGCCTTGCTCGATTCGAGTACCGGAAAGGAGGACCAGGT
CGCTCGCCAGACTCTGGACTACATTGAGGATGAAGTGAACAACGGATTCC
GTTACCTCCGCGATCTTCTGAAGAAGGTCAAGCAGACCCCCGGCTCCGGA
GACAGCCGTGTGCAGACCCAGATCGACGTCACTAGCCGGAACCTCCGTCG
AGAGATCGAACAGTACCAGAGATGCCAGTCCGACTTCCAGAAGCGCCTGC
GGGAGCAGGTTCGCAGACGTTATGAGATCGCCAACCCCGAAGCTTCCCCC
GAGGAGATCGAGCAGGGTGTTGACAATGTCTTGTTGGGCCAGGAGCAGAG
CTTCCAGGTATGCTCTTTCGAGAGATTTCAGAAAGTCCATGCTAACGTTT
CGGTTAGGTTACTGGTAGCCGGACTAGACAGGCCAACGACGCCAGGCAGG
CCGCTTTGGAGCGATCGGCCGCCATTCGCAAGATCGAGCAGGATATGATG
GAGCTTGGCCGCCTGTACCAGGAAGTGGCGGAGCTTGTCCACCAGCAGGA
GCCTGCTGTGGAGCAGATCAACCAGGATGCAGACAATGTTGCGCAGAACG
TTTCGAACGCGAACAACCAGATCACGGAAGCTATCGCCAGCGCTCGTCGG
GCGAGAAAGTGGAAGTGGTATGCTCTGCTTGTCGTCAGTAAGTGTCCCCG
ATGTGAGTACCCACTTAATAGGCCAGGCTGACAATTATCTTTAGTCCTCA
TCATCGCCATCGTCGTCGGTGTTGCTGTCGGTGTCACGGAAGCCAACAAG
TCCTCGAAATAG
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Coding sequence (CDS) from alignment at OGUI01000006.1:345213..346424-

>ATCC64974_39990-T1 ID=ATCC64974_39990-T1|Name=ATCC64974_39990-T1|organism=Aspergillus niger N402|type=CDS|length=4635bp|location=Sequence derived from alignment at OGUI01000006.1:345213..346424- (Aspergillus niger N402)
TCCTCATCATCGCCATCGTCGTCGGTGTTGCTGTCGGTGTCACGGAAGCC
AACAAGTCCTCGAAATAGGTTACTGGTAGCCGGACTAGACAGGCCAACGA
CGCCAGGCAGGCCGCTTTGGAGCGATCGGCCGCCATTCGCAAGATCGAGC
AGGATATGATGGAGCTTGGCCGCCTGTACCAGGAAGTGGCGGAGCTTGTC
CACCAGCAGGAGCCTGCTGTGGAGCAGATCAACCAGGATGCAGACAATGT
TGCGCAGAACGTTTCGAACGCGAACAACCAGATCACGGAAGCTATCGCCA
GCGCTCGTCGGGCGAGAAAGTGGAAGTGGTATGCTCTGCTTGTCGTCAAA
ATGGGCTCTTACAACCAGCCTGCGGACGCGACGACGCTGCTGAACAAGTG
CAGAGAGATCAACGACGGTATTGCGGATCTCCGCGCCAAGCGCGAGGGCC
AGCTTGCGGCCGCCCAGAACGCCTTGCTCGATTCGAGTACCGGAAAGGAG
GACCAGGTCGCTCGCCAGACTCTGGACTACATTGAGGATGAAGTGAACAA
CGGATTCCGTTACCTCCGCGATCTTCTGAAGAAGGTCAAGCAGACCCCCG
GCTCCGGAGACAGCCGTGTGCAGACCCAGATCGACGTCACTAGCCGGAAC
CTCCGTCGAGAGATCGAACAGTACCAGAGATGCCAGTCCGACTTCCAGAA
GCGCCTGCGGGAGCAGGTTCGCAGACGTTATGAGATCGCCAACCCCGAAG
CTTCCCCCGAGGAGATCGAGCAGGGTGTTGACAATGTCTTGTTGGGCCAG
GAGCAGAGCTTCCAGTACGGTGGAAACCAGGGTGGCTACGGCCAGTACAA
CCCCTATGGCCAGCAAGATGCCAACCCCTACAGCGACGCCAATGCCATGG
AGCAGGGCAACGGTAGCTACGATGAGTTCCTCATCATCGCCATCGTCGTC
GGTGTTGCTGTCGGTGTCACGGAAGCCAACAAGTCCTCGAAATAGGTTAC
TGGTAGCCGGACTAGACAGGCCAACGACGCCAGGCAGGCCGCTTTGGAGC
GATCGGCCGCCATTCGCAAGATCGAGCAGGATATGATGGAGCTTGGCCGC
CTGTACCAGGAAGTGGCGGAGCTTGTCCACCAGCAGGAGCCTGCTGTGGA
GCAGATCAACCAGGATGCAGACAATGTTGCGCAGAACGTTTCGAACGCGA
ACAACCAGATCACGGAAGCTATCGCCAGCGCTCGTCGGGCGAGAAAGTGG
AAGTGGTATGCTCTGCTTGTCGTCAAAATGGGCTCTTACAACCAGCCTGC
GGACGCGACGACGCTGCTGAACAAGTGCAGAGAGATCAACGACGGTATTG
CGGATCTCCGCGCCAAGCGCGAGGGCCAGCTTGCGGCCGCCCAGAACGCC
TTGCTCGATTCGAGTACCGGAAAGGAGGACCAGGTCGCTCGCCAGACTCT
GGACTACATTGAGGATGAAGTGAACAACGGATTCCGTTACCTCCGCGATC
TTCTGAAGAAGGTCAAGCAGACCCCCGGCTCCGGAGACAGCCGTGTGCAG
ACCCAGATCGACGTCACTAGCCGGAACCTCCGTCGAGAGATCGAACAGTA
CCAGAGATGCCAGTCCGACTTCCAGAAGCGCCTGCGGGAGCAGGTTCGCA
GACGTTATGAGATCGCCAACCCCGAAGCTTCCCCCGAGGAGATCGAGCAG
GGTGTTGACAATGTCTTGTTGGGCCAGGAGCAGAGCTTCCAGTACGGTGG
AAACCAGGGTGGCTACGGCCAGTACAACCCCTATGGCCAGCAAGATGCCA
ACCCCTACAGCGACGCCAATGCCATGGAGCAGGGCAACGGTAGCTACGAT
GAGTTCCTCATCATCGCCATCGTCGTCGGTGTTGCTGTCGGTGTCACGGA
AGCCAACAAGTCCTCGAAATAGGTTACTGGTAGCCGGACTAGACAGGCCA
ACGACGCCAGGCAGGCCGCTTTGGAGCGATCGGCCGCCATTCGCAAGATC
GAGCAGGATATGATGGAGCTTGGCCGCCTGTACCAGGAAGTGGCGGAGCT
TGTCCACCAGCAGGAGCCTGCTGTGGAGCAGATCAACCAGGATGCAGACA
ATGTTGCGCAGAACGTTTCGAACGCGAACAACCAGATCACGGAAGCTATC
GCCAGCGCTCGTCGGGCGAGAAAGTGGAAGTGGTATGCTCTGCTTGTCGT
CAAAATGGGCTCTTACAACCAGCCTGCGGACGCGACGACGCTGCTGAACA
AGTGCAGAGAGATCAACGACGGTATTGCGGATCTCCGCGCCAAGCGCGAG
GGCCAGCTTGCGGCCGCCCAGAACGCCTTGCTCGATTCGAGTACCGGAAA
GGAGGACCAGGTCGCTCGCCAGACTCTGGACTACATTGAGGATGAAGTGA
ACAACGGATTCCGTTACCTCCGCGATCTTCTGAAGAAGGTCAAGCAGACC
CCCGGCTCCGGAGACAGCCGTGTGCAGACCCAGATCGACGTCACTAGCCG
GAACCTCCGTCGAGAGATCGAACAGTACCAGAGATGCCAGTCCGACTTCC
AGAAGCGCCTGCGGGAGCAGGTTCGCAGACGTTATGAGATCGCCAACCCC
GAAGCTTCCCCCGAGGAGATCGAGCAGGGTGTTGACAATGTCTTGTTGGG
CCAGGAGCAGAGCTTCCAGTACGGTGGAAACCAGGGTGGCTACGGCCAGT
ACAACCCCTATGGCCAGCAAGATGCCAACCCCTACAGCGACGCCAATGCC
ATGGAGCAGGGCAACGGTAGCTACGATGAGTTCCTCATCATCGCCATCGT
CGTCGGTGTTGCTGTCGGTGTCACGGAAGCCAACAAGTCCTCGAAATAGG
TTACTGGTAGCCGGACTAGACAGGCCAACGACGCCAGGCAGGCCGCTTTG
GAGCGATCGGCCGCCATTCGCAAGATCGAGCAGGATATGATGGAGCTTGG
CCGCCTGTACCAGGAAGTGGCGGAGCTTGTCCACCAGCAGGAGCCTGCTG
TGGAGCAGATCAACCAGGATGCAGACAATGTTGCGCAGAACGTTTCGAAC
GCGAACAACCAGATCACGGAAGCTATCGCCAGCGCTCGTCGGGCGAGAAA
GTGGAAGTGGTATGCTCTGCTTGTCGTCAAAATGGGCTCTTACAACCAGC
CTGCGGACGCGACGACGCTGCTGAACAAGTGCAGAGAGATCAACGACGGT
ATTGCGGATCTCCGCGCCAAGCGCGAGGGCCAGCTTGCGGCCGCCCAGAA
CGCCTTGCTCGATTCGAGTACCGGAAAGGAGGACCAGGTCGCTCGCCAGA
CTCTGGACTACATTGAGGATGAAGTGAACAACGGATTCCGTTACCTCCGC
GATCTTCTGAAGAAGGTCAAGCAGACCCCCGGCTCCGGAGACAGCCGTGT
GCAGACCCAGATCGACGTCACTAGCCGGAACCTCCGTCGAGAGATCGAAC
AGTACCAGAGATGCCAGTCCGACTTCCAGAAGCGCCTGCGGGAGCAGGTT
CGCAGACGTTATGAGATCGCCAACCCCGAAGCTTCCCCCGAGGAGATCGA
GCAGGGTGTTGACAATGTCTTGTTGGGCCAGGAGCAGAGCTTCCAGTACG
GTGGAAACCAGGGTGGCTACGGCCAGTACAACCCCTATGGCCAGCAAGAT
GCCAACCCCTACAGCGACGCCAATGCCATGGAGCAGGGCAACGGTAGCTA
CGATGAGTTCCTCATCATCGCCATCGTCGTCGGTGTTGCTGTCGGTGTCA
CGGAAGCCAACAAGTCCTCGAAATAGGTTACTGGTAGCCGGACTAGACAG
GCCAACGACGCCAGGCAGGCCGCTTTGGAGCGATCGGCCGCCATTCGCAA
GATCGAGCAGGATATGATGGAGCTTGGCCGCCTGTACCAGGAAGTGGCGG
AGCTTGTCCACCAGCAGGAGCCTGCTGTGGAGCAGATCAACCAGGATGCA
GACAATGTTGCGCAGAACGTTTCGAACGCGAACAACCAGATCACGGAAGC
TATCGCCAGCGCTCGTCGGGCGAGAAAGTGGAAGTGGTATGCTCTGCTTG
TCGTCAAAATGGGCTCTTACAACCAGCCTGCGGACGCGACGACGCTGCTG
AACAAGTGCAGAGAGATCAACGACGGTATTGCGGATCTCCGCGCCAAGCG
CGAGGGCCAGCTTGCGGCCGCCCAGAACGCCTTGCTCGATTCGAGTACCG
GAAAGGAGGACCAGGTCGCTCGCCAGACTCTGGACTACATTGAGGATGAA
GTGAACAACGGATTCCGTTACCTCCGCGATCTTCTGAAGAAGGTCAAGCA
GACCCCCGGCTCCGGAGACAGCCGTGTGCAGACCCAGATCGACGTCACTA
GCCGGAACCTCCGTCGAGAGATCGAACAGTACCAGAGATGCCAGTCCGAC
TTCCAGAAGCGCCTGCGGGAGCAGGTTCGCAGACGTTATGAGATCGCCAA
CCCCGAAGCTTCCCCCGAGGAGATCGAGCAGGGTGTTGACAATGTCTTGT
TGGGCCAGGAGCAGAGCTTCCAGTACGGTGGAAACCAGGGTGGCTACGGC
CAGTACAACCCCTATGGCCAGCAAGATGCCAACCCCTACAGCGACGCCAA
TGCCATGGAGCAGGGCAACGGTAGCTACGATGAGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_39990ATCC64974_39990Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_39990-T1ATCC64974_39990-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_39990-T1.cdsATCC64974_39990-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_39990-T1.exon5ATCC64974_39990-T1.exon5Aspergillus niger N402exon
ATCC64974_39990-T1.exon4ATCC64974_39990-T1.exon4Aspergillus niger N402exon
ATCC64974_39990-T1.exon3ATCC64974_39990-T1.exon3Aspergillus niger N402exon
ATCC64974_39990-T1.exon2ATCC64974_39990-T1.exon2Aspergillus niger N402exon
ATCC64974_39990-T1.exon1ATCC64974_39990-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR010989
DBxrefInterPro:IPR000727
DBxrefInterPro:IPR006011
DBxrefPFAM:PF00804
DBxrefPFAM:PF05739
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000006.1supercontigOGUI01000006.1:345213..346424 -
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