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ATCC64974_40080-T1, ATCC64974_40080-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_40080-T1
Unique NameATCC64974_40080-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000006.1:382733..383590-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_40080-T1 ID=ATCC64974_40080-T1|Name=ATCC64974_40080-T1|organism=Aspergillus niger N402|type=mRNA|length=858bp|location=Sequence derived from alignment at OGUI01000006.1:382733..383590- (Aspergillus niger N402)
ATGCTCCGGTGGTATGTCCTTGTCCATCCTGATGATCAATATTTCCATCG
CTGATCAGGCACAGGTATCAGGCGAGGTTGGCCAAGCAGCCTATCCTCAC
TGCTAGTGTGACGAGTGCTGTAAGAATTCCCATTCTTCTTTCTTACAGAT
CATTCATTCATTTACTGTCGTATTTTCTATTATCTGATGTCAACCCCGAC
ATAATACCAATTTGAGCTGACCTTTATTTCCCATGCGGACTAGCTGTTGT
TTGGTAGTGGAGATGTTCTAGCCCAACAACTAGTCGATCGTAAGGGATTT
GATAAGCACGATCTGGCAAGAACGGGACGCATGGCCCTTTATGGTGGAGG
TGAGCTACCATATAATCCCTTGTCAATCTGGGATCTTCTTTCTGCCCTTG
GAAGTCCTGGGAAAGCCTTCCTCCATACAATGGGAAGTGGTCAAGCTAAC
ATATAACAGCGATCTTCGGGCCGGCTGCTACCACCTGGTACGGTGTCCTC
CAGCGTCACGTCGTCCTGAATAACGCCAAAACTACCCTCATTGCCCGTGT
CATCGCGGATCAATGTGTCTTTACTCCCGCACACCTTACTTGTTTCTTGT
CCTCCATGGCTATCATGGAAGGCACCGATCCGATTGAGAAGTGGCGCAAT
GGTTTCGTTCCCAGCTTCAAAGCAAACCTTGCGATTTGGCCTCTCGTTCA
AGGAGTCAACTTTGCCATCGTGCCACTTGAGTACCGCGTGCTTTTTGTCA
ACCTAGTCGCTTTGGGTGAGTATTCCGGCCTTCTACTAATATCGAATGAT
GCTGACGCCATTAGGCTGGAACTGTTTGTTGAGCTTGATTAACAGCGGTG
AGAAGTGA
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Coding sequence (CDS) from alignment at OGUI01000006.1:382733..383590-

>ATCC64974_40080-T1 ID=ATCC64974_40080-T1|Name=ATCC64974_40080-T1|organism=Aspergillus niger N402|type=CDS|length=2610bp|location=Sequence derived from alignment at OGUI01000006.1:382733..383590- (Aspergillus niger N402)
GCTGGAACTGTTTGTTGAGCTTGATTAACAGCGGTGAGAAGTGACGATCT
TCGGGCCGGCTGCTACCACCTGGTACGGTGTCCTCCAGCGTCACGTCGTC
CTGAATAACGCCAAAACTACCCTCATTGCCCGTGTCATCGCGGATCAATG
TGTCTTTACTCCCGCACACCTTACTTGTTTCTTGTCCTCCATGGCTATCA
TGGAAGGCACCGATCCGATTGAGAAGTGGCGCAATGGTTTCGTTCCCAGC
TTCAAAGCAAACCTTGCGATTTGGCCTCTCGTTCAAGGAGTCAACTTTGC
CATCGTGCCACTTGAGTACCGCGTGCTTTTTGTCAACCTAGTCGCTTTGG
CTGTTGTTTGGTAGTGGAGATGTTCTAGCCCAACAACTAGTCGATCGTAA
GGGATTTGATAAGCACGATCTGGCAAGAACGGGACGCATGGCCCTTTATG
GTGGAGGTATCAGGCGAGGTTGGCCAAGCAGCCTATCCTCACTGCTAGTG
TGACGAGTGCTATGCTCCGGTGGCTGGAACTGTTTGTTGAGCTTGATTAA
CAGCGGTGAGAAGTGACGATCTTCGGGCCGGCTGCTACCACCTGGTACGG
TGTCCTCCAGCGTCACGTCGTCCTGAATAACGCCAAAACTACCCTCATTG
CCCGTGTCATCGCGGATCAATGTGTCTTTACTCCCGCACACCTTACTTGT
TTCTTGTCCTCCATGGCTATCATGGAAGGCACCGATCCGATTGAGAAGTG
GCGCAATGGTTTCGTTCCCAGCTTCAAAGCAAACCTTGCGATTTGGCCTC
TCGTTCAAGGAGTCAACTTTGCCATCGTGCCACTTGAGTACCGCGTGCTT
TTTGTCAACCTAGTCGCTTTGGCTGTTGTTTGGTAGTGGAGATGTTCTAG
CCCAACAACTAGTCGATCGTAAGGGATTTGATAAGCACGATCTGGCAAGA
ACGGGACGCATGGCCCTTTATGGTGGAGGTATCAGGCGAGGTTGGCCAAG
CAGCCTATCCTCACTGCTAGTGTGACGAGTGCTATGCTCCGGTGGCTGGA
ACTGTTTGTTGAGCTTGATTAACAGCGGTGAGAAGTGACGATCTTCGGGC
CGGCTGCTACCACCTGGTACGGTGTCCTCCAGCGTCACGTCGTCCTGAAT
AACGCCAAAACTACCCTCATTGCCCGTGTCATCGCGGATCAATGTGTCTT
TACTCCCGCACACCTTACTTGTTTCTTGTCCTCCATGGCTATCATGGAAG
GCACCGATCCGATTGAGAAGTGGCGCAATGGTTTCGTTCCCAGCTTCAAA
GCAAACCTTGCGATTTGGCCTCTCGTTCAAGGAGTCAACTTTGCCATCGT
GCCACTTGAGTACCGCGTGCTTTTTGTCAACCTAGTCGCTTTGGCTGTTG
TTTGGTAGTGGAGATGTTCTAGCCCAACAACTAGTCGATCGTAAGGGATT
TGATAAGCACGATCTGGCAAGAACGGGACGCATGGCCCTTTATGGTGGAG
GTATCAGGCGAGGTTGGCCAAGCAGCCTATCCTCACTGCTAGTGTGACGA
GTGCTATGCTCCGGTGGCTGGAACTGTTTGTTGAGCTTGATTAACAGCGG
TGAGAAGTGACGATCTTCGGGCCGGCTGCTACCACCTGGTACGGTGTCCT
CCAGCGTCACGTCGTCCTGAATAACGCCAAAACTACCCTCATTGCCCGTG
TCATCGCGGATCAATGTGTCTTTACTCCCGCACACCTTACTTGTTTCTTG
TCCTCCATGGCTATCATGGAAGGCACCGATCCGATTGAGAAGTGGCGCAA
TGGTTTCGTTCCCAGCTTCAAAGCAAACCTTGCGATTTGGCCTCTCGTTC
AAGGAGTCAACTTTGCCATCGTGCCACTTGAGTACCGCGTGCTTTTTGTC
AACCTAGTCGCTTTGGCTGTTGTTTGGTAGTGGAGATGTTCTAGCCCAAC
AACTAGTCGATCGTAAGGGATTTGATAAGCACGATCTGGCAAGAACGGGA
CGCATGGCCCTTTATGGTGGAGGTATCAGGCGAGGTTGGCCAAGCAGCCT
ATCCTCACTGCTAGTGTGACGAGTGCTATGCTCCGGTGGCTGGAACTGTT
TGTTGAGCTTGATTAACAGCGGTGAGAAGTGACGATCTTCGGGCCGGCTG
CTACCACCTGGTACGGTGTCCTCCAGCGTCACGTCGTCCTGAATAACGCC
AAAACTACCCTCATTGCCCGTGTCATCGCGGATCAATGTGTCTTTACTCC
CGCACACCTTACTTGTTTCTTGTCCTCCATGGCTATCATGGAAGGCACCG
ATCCGATTGAGAAGTGGCGCAATGGTTTCGTTCCCAGCTTCAAAGCAAAC
CTTGCGATTTGGCCTCTCGTTCAAGGAGTCAACTTTGCCATCGTGCCACT
TGAGTACCGCGTGCTTTTTGTCAACCTAGTCGCTTTGGCTGTTGTTTGGT
AGTGGAGATGTTCTAGCCCAACAACTAGTCGATCGTAAGGGATTTGATAA
GCACGATCTGGCAAGAACGGGACGCATGGCCCTTTATGGTGGAGGTATCA
GGCGAGGTTGGCCAAGCAGCCTATCCTCACTGCTAGTGTGACGAGTGCTA
TGCTCCGGTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SYM1_2ATCC64974_40080Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_40080-T1ATCC64974_40080-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_40080-T1.cdsATCC64974_40080-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_40080-T1.exon5ATCC64974_40080-T1.exon5Aspergillus niger N402exon
ATCC64974_40080-T1.exon4ATCC64974_40080-T1.exon4Aspergillus niger N402exon
ATCC64974_40080-T1.exon3ATCC64974_40080-T1.exon3Aspergillus niger N402exon
ATCC64974_40080-T1.exon2ATCC64974_40080-T1.exon2Aspergillus niger N402exon
ATCC64974_40080-T1.exon1ATCC64974_40080-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR007248
DBxrefPFAM:PF04117
ProductProtein required for ethanol metabolism
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000006.1supercontigOGUI01000006.1:382733..383590 -
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