You are here

Home

ATCC64974_40130-T1, ATCC64974_40130-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_40130-T1
Unique NameATCC64974_40130-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000006.1:393212..394291+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_40130-T1 ID=ATCC64974_40130-T1|Name=ATCC64974_40130-T1|organism=Aspergillus niger N402|type=mRNA|length=1080bp|location=Sequence derived from alignment at OGUI01000006.1:393212..394291+ (Aspergillus niger N402)
ATGTCGCTTCCTTCCCCTCCTCCCCTTGTGTTAATCACCGGCGCGACGGG
GTTCATCGGCTCCCAAGTCGCTCTCGTATCCCTGCAGGCGGGATACCGAG
TGCGACTAAGCATCCGCAGACCCGAGCAGGAAGCCGTTCTACGGGCCCGT
TACCCGGATTTCAACAACCAAATTGAGACTATAATCATTCCTGATATCAC
AGTCCGAGATGCATTCAAACCTGCTCTTGACGGCGTGGACCACCTTATTC
ACCTGGCCTCACCAATGCCAGGTGCCGGTTCCGACCTGCAAACAGGGTAT
ATCGATCCGGCAGTCAAAGGCACCGAATCCGTTCTCTTTTCCGCGCTAGG
GTTCCCTCGGATCAAAAAAGTCATTATTGTATCATCAGTACTAGCTTTAA
CACCTCCTATGTCTCTTTGCGAGAAGGACGTGCTTGTCAGAGGTGATTTT
ATTTCGTCGCATCCTTACAGTGATCCAAAGAAAGACTGATCAACAGATAC
TATAGACAACACGAATGAAATTATCCCCATAGACCTAAACCCAGACTTGC
TCGAAGGCCCCTTCGGACATGGTTTCAAATATAGCATCTCGAAGATATCA
GCCCATCAAGTCACACGGGACTTCCTGGCCAGTCAGAATCCGCACTTTAC
CCTTGTCACCTTCCACCCCAGTTTCGTCCTCGGCGAGAGTCTGATTCAAG
GAACACCCGAGAAGATGGACGGAATAAACGCGATGTTTTGGGATAGCTTA
CATTCTGGGAAGCCAACGATACCGAACGCGTGGGTGGATGTGCGGGACGT
GGCGGAGGCACACTTGCGGGCGCTGAAGACGGAGATTGTCTCTGGGACGG
AATTCATTTTGTCGGCACCGGCTGGATCATGGGAGCGGATAGGGGACCTT
GTGAGACGGAAGTTCCCTTCTGTCGGATGTCAATTGAAGGGTCCGATCGA
AGGAGGGTGGACGGTTGATACAACAGCTGCGGAGAGGATTTTAGGTATGC
AGTGGAGGGGACAGGATGAGATGGTCGAGGCAGTACTGGAGCAGCAGCTC
AAGTTGAGGGAAGCTGCTGCCTCCCTGTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000006.1:393212..394291+

>ATCC64974_40130-T1 ID=ATCC64974_40130-T1|Name=ATCC64974_40130-T1|organism=Aspergillus niger N402|type=CDS|length=2034bp|location=Sequence derived from alignment at OGUI01000006.1:393212..394291+ (Aspergillus niger N402)
ATGTCGCTTCCTTCCCCTCCTCCCCTTGTGTTAATCACCGGCGCGACGGG
GTTCATCGGCTCCCAAGTCGCTCTCGTATCCCTGCAGGCGGGATACCGAG
TGCGACTAAGCATCCGCAGACCCGAGCAGGAAGCCGTTCTACGGGCCCGT
TACCCGGATTTCAACAACCAAATTGAGACTATAATCATTCCTGATATCAC
AGTCCGAGATGCATTCAAACCTGCTCTTGACGGCGTGGACCACCTTATTC
ACCTGGCCTCACCAATGCCAGGTGCCGGTTCCGACCTGCAAACAGGGTAT
ATCGATCCGGCAGTCAAAGGCACCGAATCCGTTCTCTTTTCCGCGCTAGG
GTTCCCTCGGATCAAAAAAGTCATTATTGTATCATCAGTACTAGCTTTAA
CACCTCCTATGTCTCTTTGCGAGAAGGACGTGCTTGTCAGAGACAACACG
AATGAAATTATCCCCATAGACCTAAACCCAGACTTGCTCGAAGGCCCCTT
CGGACATGGTTTCAAATATAGCATCTCGAAGATATCAGCCCATCAAGTCA
CACGGGACTTCCTGGCCAGTCAGAATCCGCACTTTACCCTTGTCACCTTC
CACCCCAGTTTCGTCCTCGGCGAGAGTCTGATTCAAGGAACACCCGAGAA
GATGGACGGAATAAACGCGATGTTTTGGGATAGCTTACATTCTGGGAAGC
CAACGATACCGAACGCGTGGGTGGATGTGCGGGACGTGGCGGAGGCACAC
TTGCGGGCGCTGAAGACGGAGATTGTCTCTGGGACGGAATTCATTTTGTC
GGCACCGGCTGGATCATGGGAGCGGATAGGGGACCTTGTGAGACGGAAGT
TCCCTTCTGTCGGATGTCAATTGAAGGGTCCGATCGAAGGAGGGTGGACG
GTTGATACAACAGCTGCGGAGAGGATTTTAGGTATGCAGTGGAGGGGACA
GGATGAGATGGTCGAGGCAGTACTGGAGCAGCAGCTCAAGTTGAGGGAAG
CTGCTGCCTCCCTGTAAATGTCGCTTCCTTCCCCTCCTCCCCTTGTGTTA
ATCACCGGCGCGACGGGGTTCATCGGCTCCCAAGTCGCTCTCGTATCCCT
GCAGGCGGGATACCGAGTGCGACTAAGCATCCGCAGACCCGAGCAGGAAG
CCGTTCTACGGGCCCGTTACCCGGATTTCAACAACCAAATTGAGACTATA
ATCATTCCTGATATCACAGTCCGAGATGCATTCAAACCTGCTCTTGACGG
CGTGGACCACCTTATTCACCTGGCCTCACCAATGCCAGGTGCCGGTTCCG
ACCTGCAAACAGGGTATATCGATCCGGCAGTCAAAGGCACCGAATCCGTT
CTCTTTTCCGCGCTAGGGTTCCCTCGGATCAAAAAAGTCATTATTGTATC
ATCAGTACTAGCTTTAACACCTCCTATGTCTCTTTGCGAGAAGGACGTGC
TTGTCAGAGACAACACGAATGAAATTATCCCCATAGACCTAAACCCAGAC
TTGCTCGAAGGCCCCTTCGGACATGGTTTCAAATATAGCATCTCGAAGAT
ATCAGCCCATCAAGTCACACGGGACTTCCTGGCCAGTCAGAATCCGCACT
TTACCCTTGTCACCTTCCACCCCAGTTTCGTCCTCGGCGAGAGTCTGATT
CAAGGAACACCCGAGAAGATGGACGGAATAAACGCGATGTTTTGGGATAG
CTTACATTCTGGGAAGCCAACGATACCGAACGCGTGGGTGGATGTGCGGG
ACGTGGCGGAGGCACACTTGCGGGCGCTGAAGACGGAGATTGTCTCTGGG
ACGGAATTCATTTTGTCGGCACCGGCTGGATCATGGGAGCGGATAGGGGA
CCTTGTGAGACGGAAGTTCCCTTCTGTCGGATGTCAATTGAAGGGTCCGA
TCGAAGGAGGGTGGACGGTTGATACAACAGCTGCGGAGAGGATTTTAGGT
ATGCAGTGGAGGGGACAGGATGAGATGGTCGAGGCAGTACTGGAGCAGCA
GCTCAAGTTGAGGGAAGCTGCTGCCTCCCTGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0050662obsolete coenzyme binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_40130ATCC64974_40130Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_40130-T1.exon1ATCC64974_40130-T1.exon1Aspergillus niger N402exon
ATCC64974_40130-T1.exon2ATCC64974_40130-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_40130-T1.cdsATCC64974_40130-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_40130-T1ATCC64974_40130-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR001509
DBxrefPFAM:PF01370
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000006.1supercontigOGUI01000006.1:393212..394291 +
Powered by Drupal