|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000006.1:416123..417711- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_40180-T1 ID=ATCC64974_40180-T1|Name=ATCC64974_40180-T1|organism=Aspergillus niger N402|type=mRNA|length=1589bp|location=Sequence derived from alignment at OGUI01000006.1:416123..417711- (Aspergillus niger N402)
ATGAGTTCCTCCAGACCTTCACCGCAGGCTCAGATCTACCCTGGGAAAGG
GCTGGGATTCATAAGCATGTTGAGTCATTACACTTAGTTTTGGACATGGC
TAATCGGTGTCGCATAGCTCTCGGAGCCTCCCTTCATAATGTCTTAAGCC
GCGTCAAGGCCCATCCCCAGATATACCCCGCTATTGATATTGCATACTCC
TCTGCAGAGCCCTTGAACAAGCCAGTAACCTTGCAACTTCCATCGAGCGG
TCTTCGTCTACGTTTTGATGGACCCGACCAGCGGCTTCGCTTGATCGAGG
TCTTGGACTTCTCCAAGATTGCACTTGTTTATAAGAACCAGGAAGTACTG
AAAGGTGTGAAACCGGGGGAACAGTCGGTGACACAGCAAGGCCCCAACTT
TCGCCATGTCTACAACCGTCTCTTCGGGCCCTCCTATCCTGGAGAGTATA
TACCTCCGGATAGCCCTCAGTCGCCGTATGGCACCTACGTGCTATCGTAC
CCTGGAGTCGCATTCTCCTTCCCACTGCAGAACTCGGCATGGTCCGATCA
GTGTGACTTTGTAGCATTGCTTTCCTCCTCAGCAGCCTTGCCCGCAACGT
CTATGGCCATTTTCCAGGGCTCATCTTGGCCCGAATCACGAAACAAACTA
TTCACACAGCAGCCGCAATTTCCGCGCTCGCCGGCATTGGCAAGTAAGAG
CAGAGAATCTGTTCCAGACGAGATTGAGGAGTTTCTCATACTGGGTGGCG
GCAAGATTGAAGTAGTGCGAAGATCGAGTCCATCTGCAGTCATCGCGCTG
TCAGAAACCACTCCTCAGGATCTAGTTGCGGAGTTTGGGCCGCCTGATGC
CATCTACCGTAAACATGATCGGAGAATAGCTATTCATCGAGCCGCCGGCC
GTAGCGGTGGCGAGGATGCTCTTCACATGGGTTCTTCTCCAGGCAGAATA
GATGTTACTGACATCGATCAATCTTCAAACAACAGTGTGTCCGATGACTC
TGATGACGAGCTCTTCCAACCAAACGCAGCGGATCCTTCGTCACTACCGT
CAGAATGCTTTTTCAACTACTTCCACCATGGCTTTGATGCGTTCATCTCC
TATCCAACTACGCCTGGCCCCGCCTTTCCAGAATCTGACCAGAGAGACCC
CACTCCACCGCCGCCTCATTCGCAGTTGGTCGTGACCAAAATTATTTTAC
ATGGAAATGTGCCGGGTTCATATCCTTTCAATCGCCACCGCCGAAGCCGT
TGGAGGATTGTTTTCAGTTCGCCTGATGATTTTGTTACTTCCGAGACTCG
TTATGAAGAGGTTTCGGAGCGTCTCAGGTCAACATGGAAAGGATCTTATG
CAAGCCCTGCGGAGGAGCGGGCTCTACAACGGCCCATGGTTTTGAACCGA
GGGTGGGGCGACAGCCCAGAGAGCAGCGTCGAATTTCTCGGCGGATGGGA
AGAGAGCACCGGCAAAGGGCAGAGGACGGGCCACGAGGGGCATGACGGCG
GACTAGGCAATACGGAGCTCTTCGGATTCCCTGGTCTGTTGTTTGAGGTG
ATGAAGAATGGCGCTGTGAGCTGCTTGACTATTTATTGA back to topCoding sequence (CDS) from alignment at OGUI01000006.1:416123..417711- >ATCC64974_40180-T1 ID=ATCC64974_40180-T1|Name=ATCC64974_40180-T1|organism=Aspergillus niger N402|type=CDS|length=3072bp|location=Sequence derived from alignment at OGUI01000006.1:416123..417711- (Aspergillus niger N402)
CTCTCGGAGCCTCCCTTCATAATGTCTTAAGCCGCGTCAAGGCCCATCCC
CAGATATACCCCGCTATTGATATTGCATACTCCTCTGCAGAGCCCTTGAA
CAAGCCAGTAACCTTGCAACTTCCATCGAGCGGTCTTCGTCTACGTTTTG
ATGGACCCGACCAGCGGCTTCGCTTGATCGAGGTCTTGGACTTCTCCAAG
ATTGCACTTGTTTATAAGAACCAGGAAGTACTGAAAGGTGTGAAACCGGG
GGAACAGTCGGTGACACAGCAAGGCCCCAACTTTCGCCATGTCTACAACC
GTCTCTTCGGGCCCTCCTATCCTGGAGAGTATATACCTCCGGATAGCCCT
CAGTCGCCGTATGGCACCTACGTGCTATCGTACCCTGGAGTCGCATTCTC
CTTCCCACTGCAGAACTCGGCATGGTCCGATCAGTGTGACTTTGTAGCAT
TGCTTTCCTCCTCAGCAGCCTTGCCCGCAACGTCTATGGCCATTTTCCAG
GGCTCATCTTGGCCCGAATCACGAAACAAACTATTCACACAGCAGCCGCA
ATTTCCGCGCTCGCCGGCATTGGCAAGTAAGAGCAGAGAATCTGTTCCAG
ACGAGATTGAGGAGTTTCTCATACTGGGTGGCGGCAAGATTGAAGTAGTG
CGAAGATCGAGTCCATCTGCAGTCATCGCGCTGTCAGAAACCACTCCTCA
GGATCTAGTTGCGGAGTTTGGGCCGCCTGATGCCATCTACCGTAAACATG
ATCGGAGAATAGCTATTCATCGAGCCGCCGGCCGTAGCGGTGGCGAGGAT
GCTCTTCACATGGGTTCTTCTCCAGGCAGAATAGATGTTACTGACATCGA
TCAATCTTCAAACAACAGTGTGTCCGATGACTCTGATGACGAGCTCTTCC
AACCAAACGCAGCGGATCCTTCGTCACTACCGTCAGAATGCTTTTTCAAC
TACTTCCACCATGGCTTTGATGCGTTCATCTCCTATCCAACTACGCCTGG
CCCCGCCTTTCCAGAATCTGACCAGAGAGACCCCACTCCACCGCCGCCTC
ATTCGCAGTTGGTCGTGACCAAAATTATTTTACATGGAAATGTGCCGGGT
TCATATCCTTTCAATCGCCACCGCCGAAGCCGTTGGAGGATTGTTTTCAG
TTCGCCTGATGATTTTGTTACTTCCGAGACTCGTTATGAAGAGGTTTCGG
AGCGTCTCAGGTCAACATGGAAAGGATCTTATGCAAGCCCTGCGGAGGAG
CGGGCTCTACAACGGCCCATGGTTTTGAACCGAGGGTGGGGCGACAGCCC
AGAGAGCAGCGTCGAATTTCTCGGCGGATGGGAAGAGAGCACCGGCAAAG
GGCAGAGGACGGGCCACGAGGGGCATGACGGCGGACTAGGCAATACGGAG
CTCTTCGGATTCCCTGGTCTGTTGTTTGAGGTGATGAAGAATGGCGCTGT
GAGCTGCTTGACTATTTATTGAATGAGTTCCTCCAGACCTTCACCGCAGG
CTCAGATCTACCCTGGGAAAGGGCTGGGATTCATAACTCTCGGAGCCTCC
CTTCATAATGTCTTAAGCCGCGTCAAGGCCCATCCCCAGATATACCCCGC
TATTGATATTGCATACTCCTCTGCAGAGCCCTTGAACAAGCCAGTAACCT
TGCAACTTCCATCGAGCGGTCTTCGTCTACGTTTTGATGGACCCGACCAG
CGGCTTCGCTTGATCGAGGTCTTGGACTTCTCCAAGATTGCACTTGTTTA
TAAGAACCAGGAAGTACTGAAAGGTGTGAAACCGGGGGAACAGTCGGTGA
CACAGCAAGGCCCCAACTTTCGCCATGTCTACAACCGTCTCTTCGGGCCC
TCCTATCCTGGAGAGTATATACCTCCGGATAGCCCTCAGTCGCCGTATGG
CACCTACGTGCTATCGTACCCTGGAGTCGCATTCTCCTTCCCACTGCAGA
ACTCGGCATGGTCCGATCAGTGTGACTTTGTAGCATTGCTTTCCTCCTCA
GCAGCCTTGCCCGCAACGTCTATGGCCATTTTCCAGGGCTCATCTTGGCC
CGAATCACGAAACAAACTATTCACACAGCAGCCGCAATTTCCGCGCTCGC
CGGCATTGGCAAGTAAGAGCAGAGAATCTGTTCCAGACGAGATTGAGGAG
TTTCTCATACTGGGTGGCGGCAAGATTGAAGTAGTGCGAAGATCGAGTCC
ATCTGCAGTCATCGCGCTGTCAGAAACCACTCCTCAGGATCTAGTTGCGG
AGTTTGGGCCGCCTGATGCCATCTACCGTAAACATGATCGGAGAATAGCT
ATTCATCGAGCCGCCGGCCGTAGCGGTGGCGAGGATGCTCTTCACATGGG
TTCTTCTCCAGGCAGAATAGATGTTACTGACATCGATCAATCTTCAAACA
ACAGTGTGTCCGATGACTCTGATGACGAGCTCTTCCAACCAAACGCAGCG
GATCCTTCGTCACTACCGTCAGAATGCTTTTTCAACTACTTCCACCATGG
CTTTGATGCGTTCATCTCCTATCCAACTACGCCTGGCCCCGCCTTTCCAG
AATCTGACCAGAGAGACCCCACTCCACCGCCGCCTCATTCGCAGTTGGTC
GTGACCAAAATTATTTTACATGGAAATGTGCCGGGTTCATATCCTTTCAA
TCGCCACCGCCGAAGCCGTTGGAGGATTGTTTTCAGTTCGCCTGATGATT
TTGTTACTTCCGAGACTCGTTATGAAGAGGTTTCGGAGCGTCTCAGGTCA
ACATGGAAAGGATCTTATGCAAGCCCTGCGGAGGAGCGGGCTCTACAACG
GCCCATGGTTTTGAACCGAGGGTGGGGCGACAGCCCAGAGAGCAGCGTCG
AATTTCTCGGCGGATGGGAAGAGAGCACCGGCAAAGGGCAGAGGACGGGC
CACGAGGGGCATGACGGCGGACTAGGCAATACGGAGCTCTTCGGATTCCC
TGGTCTGTTGTTTGAGGTGATGAAGAATGGCGCTGTGAGCTGCTTGACTA
TTTATTGAATGAGTTCCTCCAGACCTTCACCGCAGGCTCAGATCTACCCT
GGGAAAGGGCTGGGATTCATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_40180-T1 | ATCC64974_40180-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR005373 |
| DBxref | PFAM:PF03676 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000006.1 | supercontig | OGUI01000006.1:416123..417711 - |
|
