You are here

Home

ATCC64974_40250-T1, ATCC64974_40250-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_40250-T1
Unique NameATCC64974_40250-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000006.1:429606..430504-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_40250-T1 ID=ATCC64974_40250-T1|Name=ATCC64974_40250-T1|organism=Aspergillus niger N402|type=mRNA|length=899bp|location=Sequence derived from alignment at OGUI01000006.1:429606..430504- (Aspergillus niger N402)
ATGGCAGACTCTACCACAGACCAACCCCAACAACCCGAACAGCAACAGCA
GCAGCAGCAATCCAACCCTTTCATCAACATCTTCACCACCTTCCGCGACG
AACTCGACGAGCACCACGACCGTCGCGAACGCATAATAAAAGCCAGTCGC
GACATCACCGCCCTCAGCAAGAAGATCATCTTTGCGTTGCAGCGGTAATC
CCCTCCCCTACCCTTACCCACCATCTTATCCCCAAAACTAACACAGATGA
TAATAATAGAGTCCGAACCCTGAACACATCCCTCCCCGCCTCTCTCACCA
AAGAAACTACCACCCGCTTCAACCAAATAACCACACACTTCACCTCCCTC
CTCCCTGACCTTCGCCCAGCACCAAACACCCACCGCTACATGCGGCAACT
CAGCCCCGCGATCCAGGAATTCATCGAAGCGTTATCCTTTCACCACTACC
TTACCACTCAGACTCTGATCACACTCGATGAAGTGAGGAAGCATCTTCCC
GAAGGAATTCTGGTTACGGAGGAGGATTATCTACTCGGGTTGTTCGATTT
GACTGGGGAGATGATGCGGTTTGCGGTTACCGGGTTGTCTGCTGGCACTT
CTACATCTGATGATGGGGGTGAAGGTGGTGGTGGTGGAGGATTGGGCCAG
GAGCAGAAAGGCATCGTGGTGGATTTGAGGGAAATGAGATGCGGGTTTGA
GGGGTTGAGTGTACCGGGGAGACATCGGGGCGTTATGTTGAGGGATATGG
GGAAGAAGGTGGACGTCATGCAGGGGAGTGTGGAGAAGGTGGAACGCGCG
GCGTATGGGATTTTGGTCAGGGGGAGGGAGAGACCGAAGGGGTGGAGGCC
GGATTTGGTGGTTGGTGGGGGTGGGATGGGTGGTGAGGATGAGTATTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000006.1:429606..430504-

>ATCC64974_40250-T1 ID=ATCC64974_40250-T1|Name=ATCC64974_40250-T1|organism=Aspergillus niger N402|type=CDS|length=1668bp|location=Sequence derived from alignment at OGUI01000006.1:429606..430504- (Aspergillus niger N402)
AGTCCGAACCCTGAACACATCCCTCCCCGCCTCTCTCACCAAAGAAACTA
CCACCCGCTTCAACCAAATAACCACACACTTCACCTCCCTCCTCCCTGAC
CTTCGCCCAGCACCAAACACCCACCGCTACATGCGGCAACTCAGCCCCGC
GATCCAGGAATTCATCGAAGCGTTATCCTTTCACCACTACCTTACCACTC
AGACTCTGATCACACTCGATGAAGTGAGGAAGCATCTTCCCGAAGGAATT
CTGGTTACGGAGGAGGATTATCTACTCGGGTTGTTCGATTTGACTGGGGA
GATGATGCGGTTTGCGGTTACCGGGTTGTCTGCTGGCACTTCTACATCTG
ATGATGGGGGTGAAGGTGGTGGTGGTGGAGGATTGGGCCAGGAGCAGAAA
GGCATCGTGGTGGATTTGAGGGAAATGAGATGCGGGTTTGAGGGGTTGAG
TGTACCGGGGAGACATCGGGGCGTTATGTTGAGGGATATGGGGAAGAAGG
TGGACGTCATGCAGGGGAGTGTGGAGAAGGTGGAACGCGCGGCGTATGGG
ATTTTGGTCAGGGGGAGGGAGAGACCGAAGGGGTGGAGGCCGGATTTGGT
GGTTGGTGGGGGTGGGATGGGTGGTGAGGATGAGTATTGAATGGCAGACT
CTACCACAGACCAACCCCAACAACCCGAACAGCAACAGCAGCAGCAGCAA
TCCAACCCTTTCATCAACATCTTCACCACCTTCCGCGACGAACTCGACGA
GCACCACGACCGTCGCGAACGCATAATAAAAGCCAGTCGCGACATCACCG
CCCTCAGCAAGAAGATCATCTTTGCGTTGCAGCGAGTCCGAACCCTGAAC
ACATCCCTCCCCGCCTCTCTCACCAAAGAAACTACCACCCGCTTCAACCA
AATAACCACACACTTCACCTCCCTCCTCCCTGACCTTCGCCCAGCACCAA
ACACCCACCGCTACATGCGGCAACTCAGCCCCGCGATCCAGGAATTCATC
GAAGCGTTATCCTTTCACCACTACCTTACCACTCAGACTCTGATCACACT
CGATGAAGTGAGGAAGCATCTTCCCGAAGGAATTCTGGTTACGGAGGAGG
ATTATCTACTCGGGTTGTTCGATTTGACTGGGGAGATGATGCGGTTTGCG
GTTACCGGGTTGTCTGCTGGCACTTCTACATCTGATGATGGGGGTGAAGG
TGGTGGTGGTGGAGGATTGGGCCAGGAGCAGAAAGGCATCGTGGTGGATT
TGAGGGAAATGAGATGCGGGTTTGAGGGGTTGAGTGTACCGGGGAGACAT
CGGGGCGTTATGTTGAGGGATATGGGGAAGAAGGTGGACGTCATGCAGGG
GAGTGTGGAGAAGGTGGAACGCGCGGCGTATGGGATTTTGGTCAGGGGGA
GGGAGAGACCGAAGGGGTGGAGGCCGGATTTGGTGGTTGGTGGGGGTGGG
ATGGGTGGTGAGGATGAGTATTGAATGGCAGACTCTACCACAGACCAACC
CCAACAACCCGAACAGCAACAGCAGCAGCAGCAATCCAACCCTTTCATCA
ACATCTTCACCACCTTCCGCGACGAACTCGACGAGCACCACGACCGTCGC
GAACGCATAATAAAAGCCAGTCGCGACATCACCGCCCTCAGCAAGAAGAT
CATCTTTGCGTTGCAGCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_40250ATCC64974_40250Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_40250-T1ATCC64974_40250-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_40250-T1.cdsATCC64974_40250-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_40250-T1.exon2ATCC64974_40250-T1.exon2Aspergillus niger N402exon
ATCC64974_40250-T1.exon1ATCC64974_40250-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036081
DBxrefInterPro:IPR002848
DBxrefInterPro:IPR016069
DBxrefInterPro:IPR016068
DBxrefPFAM:PF01997
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000006.1supercontigOGUI01000006.1:429606..430504 -
Powered by Drupal