You are here

Home

ATCC64974_40620-T1, ATCC64974_40620-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_40620-T1
Unique NameATCC64974_40620-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000006.1:540384..541945-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_40620-T1 ID=ATCC64974_40620-T1|Name=ATCC64974_40620-T1|organism=Aspergillus niger N402|type=mRNA|length=1562bp|location=Sequence derived from alignment at OGUI01000006.1:540384..541945- (Aspergillus niger N402)
ATGTCCACCAATCCCAACCCCATTAACATAGAAATCGCCATAATCGGCTC
CGGCCTAATCGGGACCCTCCTGGCCCTCGGCCTCCTCAACATCCCCATCC
CCAACACCACCAAAGACCCTCAATCTACCAACGAAGGCGGAAAAAGCACG
AGCCTCAGCATAAAAATCTACGAACAATCCCCCACCGCGCACGAACTCGG
CGCTGGAATCGGCTTCACGGCCTGCGCGCGGAAATGCATGGCGCTCATGG
ATCCCCGCATCGCGGAGTGTGTGGCCCGCGTAGCGACACTTAACGGGGAA
CCAGAGGATCCGGATTACTGTATGCGGTTTGTGGATGGGTTTAGGACGTA
TACGGAGGGTGATTGTTCGGGGACGATGTCGAAGGGGGATGCGGAGGAGG
GAATTGGTGTTGATGTTAGGGGGGTGGGTAGTGATAGAGTTAATGATGAA
TCGGATAGAAGAGATGAAGATAAAGATGACGATGGGGGCGAAGGTGTGTA
TGTCTCCGGGAAAGTCTACAAATTGTATGCCGGCCCACGCGGCTTCGAAG
GTTGCCACCGGGGCCAGTTCCTGGAAGAAGTGATGAAACTCATGCCTGAG
GGAGCAGTGGAGTATAGTAAGCGGGTGGAGGGGTATGAGTATCTCCCTTC
GGGGAGGATTCAGTTGGGGTTTAGTGATGGAGGGAGGGTGGAGTGTGATC
TTGGTAAGTGTATCTTCATCCAAATTTCTAAAACTTTCTTAAACAAGATG
CTAATAAGTGATCAGTCCTCGCCTGCGACGGCATCAAATCCCTCATTCGC
ACCCACCTCTACCCCCAGAGCAAACCACAATACACCCACCAATTCGCCTT
CCGGGGCCTGGTCCCCATGGCCACGGCAATCAAAAAGCTAGGCCGCTACC
GCGCTCTCCGCCAACACATGCACTGCGGACCGCGCGCACACGTGCTCCAC
TTCCCCGTCGCGAAGCAGCAGCTCATGAATGTCGTTGCGTTCGTGCAAGA
CCCGAATGACTGGACGCACGCCGGAATGACCGCGCCAGCGAGGAAGAGTG
AAGTCGTGGAAGCGTTCAAGGAATGGGGCCCGTTTGTGCGCGCCGTGATT
GATCTGCTGCCTGAGGAGCTGGATAAGTGGGCTGTGTTTGATACTTTTGA
TAGTCCGGTGCCTAAATATGCGGAAAGGAGGGTGGCGCTGGTGGGCGATG
CAGCGCATGCGTCGTCGCCGCATCATGGGGCCGGGGCGGGGATGGGGGTG
GAGGATGCATTGGCGCTGGTTACGGCTATTAAGAGGGCAAGGGAGGATGT
GGATCGTGGGACGGAGGTGAATGGGGCGTTGGAGGCGGCGGTGAGGGCAT
ATTCGAGGGTTAGGTATGAGCGGTCGCAGTGGTTGGTGAGGAGTAGTCGC
GAGGTGGGATGGACGTATGAGTGGATGAGTGAGGATGTTGGGGCAGATAT
GGATCGTGCGTTTGCAGATATAAAAAAGAGGAGTTATCAGGTGTGGCATT
TTGATGTAGAGGCCATGGTGGCAGAAGTGGAAAGACAGTATCGTTGGTGT
TTGTGGAACTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000006.1:540384..541945-

>ATCC64974_40620-T1 ID=ATCC64974_40620-T1|Name=ATCC64974_40620-T1|organism=Aspergillus niger N402|type=CDS|length=3000bp|location=Sequence derived from alignment at OGUI01000006.1:540384..541945- (Aspergillus niger N402)
TCCTCGCCTGCGACGGCATCAAATCCCTCATTCGCACCCACCTCTACCCC
CAGAGCAAACCACAATACACCCACCAATTCGCCTTCCGGGGCCTGGTCCC
CATGGCCACGGCAATCAAAAAGCTAGGCCGCTACCGCGCTCTCCGCCAAC
ACATGCACTGCGGACCGCGCGCACACGTGCTCCACTTCCCCGTCGCGAAG
CAGCAGCTCATGAATGTCGTTGCGTTCGTGCAAGACCCGAATGACTGGAC
GCACGCCGGAATGACCGCGCCAGCGAGGAAGAGTGAAGTCGTGGAAGCGT
TCAAGGAATGGGGCCCGTTTGTGCGCGCCGTGATTGATCTGCTGCCTGAG
GAGCTGGATAAGTGGGCTGTGTTTGATACTTTTGATAGTCCGGTGCCTAA
ATATGCGGAAAGGAGGGTGGCGCTGGTGGGCGATGCAGCGCATGCGTCGT
CGCCGCATCATGGGGCCGGGGCGGGGATGGGGGTGGAGGATGCATTGGCG
CTGGTTACGGCTATTAAGAGGGCAAGGGAGGATGTGGATCGTGGGACGGA
GGTGAATGGGGCGTTGGAGGCGGCGGTGAGGGCATATTCGAGGGTTAGGT
ATGAGCGGTCGCAGTGGTTGGTGAGGAGTAGTCGCGAGGTGGGATGGACG
TATGAGTGGATGAGTGAGGATGTTGGGGCAGATATGGATCGTGCGTTTGC
AGATATAAAAAAGAGGAGTTATCAGGTGTGGCATTTTGATGTAGAGGCCA
TGGTGGCAGAAGTGGAAAGACAGTATCGTTGGTGTTTGTGGAACTAGATG
TCCACCAATCCCAACCCCATTAACATAGAAATCGCCATAATCGGCTCCGG
CCTAATCGGGACCCTCCTGGCCCTCGGCCTCCTCAACATCCCCATCCCCA
ACACCACCAAAGACCCTCAATCTACCAACGAAGGCGGAAAAAGCACGAGC
CTCAGCATAAAAATCTACGAACAATCCCCCACCGCGCACGAACTCGGCGC
TGGAATCGGCTTCACGGCCTGCGCGCGGAAATGCATGGCGCTCATGGATC
CCCGCATCGCGGAGTGTGTGGCCCGCGTAGCGACACTTAACGGGGAACCA
GAGGATCCGGATTACTGTATGCGGTTTGTGGATGGGTTTAGGACGTATAC
GGAGGGTGATTGTTCGGGGACGATGTCGAAGGGGGATGCGGAGGAGGGAA
TTGGTGTTGATGTTAGGGGGGTGGGTAGTGATAGAGTTAATGATGAATCG
GATAGAAGAGATGAAGATAAAGATGACGATGGGGGCGAAGGTGTGTATGT
CTCCGGGAAAGTCTACAAATTGTATGCCGGCCCACGCGGCTTCGAAGGTT
GCCACCGGGGCCAGTTCCTGGAAGAAGTGATGAAACTCATGCCTGAGGGA
GCAGTGGAGTATAGTAAGCGGGTGGAGGGGTATGAGTATCTCCCTTCGGG
GAGGATTCAGTTGGGGTTTAGTGATGGAGGGAGGGTGGAGTGTGATCTTG
TCCTCGCCTGCGACGGCATCAAATCCCTCATTCGCACCCACCTCTACCCC
CAGAGCAAACCACAATACACCCACCAATTCGCCTTCCGGGGCCTGGTCCC
CATGGCCACGGCAATCAAAAAGCTAGGCCGCTACCGCGCTCTCCGCCAAC
ACATGCACTGCGGACCGCGCGCACACGTGCTCCACTTCCCCGTCGCGAAG
CAGCAGCTCATGAATGTCGTTGCGTTCGTGCAAGACCCGAATGACTGGAC
GCACGCCGGAATGACCGCGCCAGCGAGGAAGAGTGAAGTCGTGGAAGCGT
TCAAGGAATGGGGCCCGTTTGTGCGCGCCGTGATTGATCTGCTGCCTGAG
GAGCTGGATAAGTGGGCTGTGTTTGATACTTTTGATAGTCCGGTGCCTAA
ATATGCGGAAAGGAGGGTGGCGCTGGTGGGCGATGCAGCGCATGCGTCGT
CGCCGCATCATGGGGCCGGGGCGGGGATGGGGGTGGAGGATGCATTGGCG
CTGGTTACGGCTATTAAGAGGGCAAGGGAGGATGTGGATCGTGGGACGGA
GGTGAATGGGGCGTTGGAGGCGGCGGTGAGGGCATATTCGAGGGTTAGGT
ATGAGCGGTCGCAGTGGTTGGTGAGGAGTAGTCGCGAGGTGGGATGGACG
TATGAGTGGATGAGTGAGGATGTTGGGGCAGATATGGATCGTGCGTTTGC
AGATATAAAAAAGAGGAGTTATCAGGTGTGGCATTTTGATGTAGAGGCCA
TGGTGGCAGAAGTGGAAAGACAGTATCGTTGGTGTTTGTGGAACTAGATG
TCCACCAATCCCAACCCCATTAACATAGAAATCGCCATAATCGGCTCCGG
CCTAATCGGGACCCTCCTGGCCCTCGGCCTCCTCAACATCCCCATCCCCA
ACACCACCAAAGACCCTCAATCTACCAACGAAGGCGGAAAAAGCACGAGC
CTCAGCATAAAAATCTACGAACAATCCCCCACCGCGCACGAACTCGGCGC
TGGAATCGGCTTCACGGCCTGCGCGCGGAAATGCATGGCGCTCATGGATC
CCCGCATCGCGGAGTGTGTGGCCCGCGTAGCGACACTTAACGGGGAACCA
GAGGATCCGGATTACTGTATGCGGTTTGTGGATGGGTTTAGGACGTATAC
GGAGGGTGATTGTTCGGGGACGATGTCGAAGGGGGATGCGGAGGAGGGAA
TTGGTGTTGATGTTAGGGGGGTGGGTAGTGATAGAGTTAATGATGAATCG
GATAGAAGAGATGAAGATAAAGATGACGATGGGGGCGAAGGTGTGTATGT
CTCCGGGAAAGTCTACAAATTGTATGCCGGCCCACGCGGCTTCGAAGGTT
GCCACCGGGGCCAGTTCCTGGAAGAAGTGATGAAACTCATGCCTGAGGGA
GCAGTGGAGTATAGTAAGCGGGTGGAGGGGTATGAGTATCTCCCTTCGGG
GAGGATTCAGTTGGGGTTTAGTGATGGAGGGAGGGTGGAGTGTGATCTTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0071949FAD binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_40620ATCC64974_40620Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_40620-T1ATCC64974_40620-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_40620-T1.cdsATCC64974_40620-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_40620-T1.exon2ATCC64974_40620-T1.exon2Aspergillus niger N402exon
ATCC64974_40620-T1.exon1ATCC64974_40620-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000061.2
NoteSMCOG1087:hypothetical protein
DBxrefInterPro:IPR002938
DBxrefInterPro:IPR036188
DBxrefPFAM:PF01494
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000006.1supercontigOGUI01000006.1:540384..541945 -
Powered by Drupal