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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000006.1:622842..624622- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_40910-T1 ID=ATCC64974_40910-T1|Name=ATCC64974_40910-T1|organism=Aspergillus niger N402|type=mRNA|length=1781bp|location=Sequence derived from alignment at OGUI01000006.1:622842..624622- (Aspergillus niger N402) ATGGCCATGAATAAACCGCTCTCAGATCTCCAAGCGACCGGATATAGGCT
GCGCAAGTCACATGAGAAGTCCCGTAATGACTGCCTCAGATGCAAGCAGT
TACGCAAGAAGGTACTACACGAAGCATATGCTGTGCTTCCATCCTATACA
CTTCAGACCAATCATTCTGATTATATCGCCAGTGCGATGAAGCCAGACCG
AAATGCTCACGTTGCACCAGACTCTCGTACACATGTCAATATCAACACCG
TCCGAATACCAGCGAATCGGACACAGAGCCGACCGGTTTCCCGAACTCGG
AGATTGAATTCGCTGGATCCGAACTGACATCGAGGCGGCTCTCGAGCGAT
CGTCCATCGGGTCCTATCACTCCCTCCATTGATCAACTTCCCCTTTCGCC
ACAATCAAATGGCGGGGAAGATATACCCGGCTTAGACCTACCTTCCCCGG
ATCCTCTTAACGCGACCGAACTCAATCTTCTAGCTCATTACCTCTCGCAC
ACTAGCCAAACGATCCCATTCGATTCCCTCGACCTCTACGCTCTGGCTGT
CGGAGTACCTAATCTTGCCTTCAAATGCAAGGCAGTCATGTCATCCCTGC
TAAGCCTGGCAGCAGCATGCAGATGCCACGACATAGCAAATGAGAACACC
CAAAGACCCCTCGACACACGGACCTTAACAGAGATCAATGACCTCCTTGC
GTTAGCCGAACGCCATCACGCGGCATCTCTCCGCCACATCCAAGCCACGA
TGCAAATAACCGAATCCTACGATAACGTCCTCGCCAATGCAGCATTGATG
GTCTTGTACGCATCGGCCAGCCACTCCATTCGTGTCCACCTGGCAGCCAC
AGCTGAGAAATATGGACAGAGGCTGCCGACAGAATTATTGCCGCAACATT
CGCAGTGGATATCGTTCACACGCGCAGCGCATACGGCATCTAGCGCTATA
CTAAATGATATTGTTAACGCTACCCCTCCCAGCAGCACGGTGGTTGATAC
GGGATCAGAGTCCCATGAAGCAGTATCAAGTCCTTTATCACCGCAAGACG
GTCCATCTCCGGAAACGAAGAGCTTATTCCTCCCGCTCGTTGCATCTACC
TGTGATCGAGCTCTAGGAAATCTTCGTAGGAGAGCAGAACGCACAACTGC
AGAGCAGCGTTCCTCCGCTTTCTGTAGCGCGATTGACCAGCGACGGGCTC
ACGCATTACTGGAAACCATAACTATCCTGGAGAGCTGTGCATCAGCAGCG
CTATCGCCAGGGGCAAGTGATAAGGGGAAGGTTGTGTTCACAGCGTCTCC
AAATACTCAGCACACATCGGTGTTTGGATGTTCCCGTGGTGTCTCACCAT
GGGTGGCTCGATACATGATCAGTGTCACGTCTATGGAGGCACCGCAAATC
CTCCGACGTATCATTATGTCCTTTTTGAACAAGGCTCCGACCGAGTTTCT
CAACATCGTGCGATCGGTATTGGACTCTCCTACTGTAAAAGGTAGGAACG
AGAATACAACACTACCGGCTTCATCTGCAACCAGGGAGCCATTAATGGTC
ACTCCGATACATATCCTGGCTATGGATATATTCGCTCATTGGCTGGTTTT
AGTCATGTTATTGGATGGGGTGTGGTGGATCAGTAATATTGGACAGTGGG
AGCTCAGCCAAGTCATCTCTTTGATGAAAAGACAGAATGTCCTCTCCCAG
TTGGCTGACAGTAGCGAAATGTGGTGGCCCGAGAGTATGTACTTGGTTAA
GCGAGAGCTCACGCCCGATTCCTGGCATTAA back to topCoding sequence (CDS) from alignment at OGUI01000006.1:622842..624622- >ATCC64974_40910-T1 ID=ATCC64974_40910-T1|Name=ATCC64974_40910-T1|organism=Aspergillus niger N402|type=CDS|length=3420bp|location=Sequence derived from alignment at OGUI01000006.1:622842..624622- (Aspergillus niger N402) TGCGATGAAGCCAGACCGAAATGCTCACGTTGCACCAGACTCTCGTACAC ATGTCAATATCAACACCGTCCGAATACCAGCGAATCGGACACAGAGCCGA CCGGTTTCCCGAACTCGGAGATTGAATTCGCTGGATCCGAACTGACATCG AGGCGGCTCTCGAGCGATCGTCCATCGGGTCCTATCACTCCCTCCATTGA TCAACTTCCCCTTTCGCCACAATCAAATGGCGGGGAAGATATACCCGGCT TAGACCTACCTTCCCCGGATCCTCTTAACGCGACCGAACTCAATCTTCTA GCTCATTACCTCTCGCACACTAGCCAAACGATCCCATTCGATTCCCTCGA CCTCTACGCTCTGGCTGTCGGAGTACCTAATCTTGCCTTCAAATGCAAGG CAGTCATGTCATCCCTGCTAAGCCTGGCAGCAGCATGCAGATGCCACGAC ATAGCAAATGAGAACACCCAAAGACCCCTCGACACACGGACCTTAACAGA GATCAATGACCTCCTTGCGTTAGCCGAACGCCATCACGCGGCATCTCTCC GCCACATCCAAGCCACGATGCAAATAACCGAATCCTACGATAACGTCCTC GCCAATGCAGCATTGATGGTCTTGTACGCATCGGCCAGCCACTCCATTCG TGTCCACCTGGCAGCCACAGCTGAGAAATATGGACAGAGGCTGCCGACAG AATTATTGCCGCAACATTCGCAGTGGATATCGTTCACACGCGCAGCGCAT ACGGCATCTAGCGCTATACTAAATGATATTGTTAACGCTACCCCTCCCAG CAGCACGGTGGTTGATACGGGATCAGAGTCCCATGAAGCAGTATCAAGTC CTTTATCACCGCAAGACGGTCCATCTCCGGAAACGAAGAGCTTATTCCTC CCGCTCGTTGCATCTACCTGTGATCGAGCTCTAGGAAATCTTCGTAGGAG AGCAGAACGCACAACTGCAGAGCAGCGTTCCTCCGCTTTCTGTAGCGCGA TTGACCAGCGACGGGCTCACGCATTACTGGAAACCATAACTATCCTGGAG AGCTGTGCATCAGCAGCGCTATCGCCAGGGGCAAGTGATAAGGGGAAGGT TGTGTTCACAGCGTCTCCAAATACTCAGCACACATCGGTGTTTGGATGTT CCCGTGGTGTCTCACCATGGGTGGCTCGATACATGATCAGTGTCACGTCT ATGGAGGCACCGCAAATCCTCCGACGTATCATTATGTCCTTTTTGAACAA GGCTCCGACCGAGTTTCTCAACATCGTGCGATCGGTATTGGACTCTCCTA CTGTAAAAGGTAGGAACGAGAATACAACACTACCGGCTTCATCTGCAACC AGGGAGCCATTAATGGTCACTCCGATACATATCCTGGCTATGGATATATT CGCTCATTGGCTGGTTTTAGTCATGTTATTGGATGGGGTGTGGTGGATCA GTAATATTGGACAGTGGGAGCTCAGCCAAGTCATCTCTTTGATGAAAAGA CAGAATGTCCTCTCCCAGTTGGCTGACAGTAGCGAAATGTGGTGGCCCGA GAGTATGTACTTGGTTAAGCGAGAGCTCACGCCCGATTCCTGGCATTAAA TGGCCATGAATAAACCGCTCTCAGATCTCCAAGCGACCGGATATAGGCTG CGCAAGTCACATGAGAAGTCCCGTAATGACTGCCTCAGATGCAAGCAGTT ACGCAAGAAGTGCGATGAAGCCAGACCGAAATGCTCACGTTGCACCAGAC TCTCGTACACATGTCAATATCAACACCGTCCGAATACCAGCGAATCGGAC ACAGAGCCGACCGGTTTCCCGAACTCGGAGATTGAATTCGCTGGATCCGA ACTGACATCGAGGCGGCTCTCGAGCGATCGTCCATCGGGTCCTATCACTC CCTCCATTGATCAACTTCCCCTTTCGCCACAATCAAATGGCGGGGAAGAT ATACCCGGCTTAGACCTACCTTCCCCGGATCCTCTTAACGCGACCGAACT CAATCTTCTAGCTCATTACCTCTCGCACACTAGCCAAACGATCCCATTCG ATTCCCTCGACCTCTACGCTCTGGCTGTCGGAGTACCTAATCTTGCCTTC AAATGCAAGGCAGTCATGTCATCCCTGCTAAGCCTGGCAGCAGCATGCAG ATGCCACGACATAGCAAATGAGAACACCCAAAGACCCCTCGACACACGGA CCTTAACAGAGATCAATGACCTCCTTGCGTTAGCCGAACGCCATCACGCG GCATCTCTCCGCCACATCCAAGCCACGATGCAAATAACCGAATCCTACGA TAACGTCCTCGCCAATGCAGCATTGATGGTCTTGTACGCATCGGCCAGCC ACTCCATTCGTGTCCACCTGGCAGCCACAGCTGAGAAATATGGACAGAGG CTGCCGACAGAATTATTGCCGCAACATTCGCAGTGGATATCGTTCACACG CGCAGCGCATACGGCATCTAGCGCTATACTAAATGATATTGTTAACGCTA CCCCTCCCAGCAGCACGGTGGTTGATACGGGATCAGAGTCCCATGAAGCA GTATCAAGTCCTTTATCACCGCAAGACGGTCCATCTCCGGAAACGAAGAG CTTATTCCTCCCGCTCGTTGCATCTACCTGTGATCGAGCTCTAGGAAATC TTCGTAGGAGAGCAGAACGCACAACTGCAGAGCAGCGTTCCTCCGCTTTC TGTAGCGCGATTGACCAGCGACGGGCTCACGCATTACTGGAAACCATAAC TATCCTGGAGAGCTGTGCATCAGCAGCGCTATCGCCAGGGGCAAGTGATA AGGGGAAGGTTGTGTTCACAGCGTCTCCAAATACTCAGCACACATCGGTG TTTGGATGTTCCCGTGGTGTCTCACCATGGGTGGCTCGATACATGATCAG TGTCACGTCTATGGAGGCACCGCAAATCCTCCGACGTATCATTATGTCCT TTTTGAACAAGGCTCCGACCGAGTTTCTCAACATCGTGCGATCGGTATTG GACTCTCCTACTGTAAAAGGTAGGAACGAGAATACAACACTACCGGCTTC ATCTGCAACCAGGGAGCCATTAATGGTCACTCCGATACATATCCTGGCTA TGGATATATTCGCTCATTGGCTGGTTTTAGTCATGTTATTGGATGGGGTG TGGTGGATCAGTAATATTGGACAGTGGGAGCTCAGCCAAGTCATCTCTTT GATGAAAAGACAGAATGTCCTCTCCCAGTTGGCTGACAGTAGCGAAATGT GGTGGCCCGAGAGTATGTACTTGGTTAAGCGAGAGCTCACGCCCGATTCC TGGCATTAAATGGCCATGAATAAACCGCTCTCAGATCTCCAAGCGACCGG ATATAGGCTGCGCAAGTCACATGAGAAGTCCCGTAATGACTGCCTCAGAT GCAAGCAGTTACGCAAGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005634 | nucleus |
Vocabulary: Biological Process
Term | Definition |
GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
Term | Definition |
GO:0008270 | zinc ion binding |
GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
ATCC64974_40910-T1 | ATCC64974_40910-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | EggNog:ENOG41 |
DBxref | InterPro:IPR036864 |
DBxref | InterPro:IPR021858 |
DBxref | InterPro:IPR001138 |
DBxref | PFAM:PF00172 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
OGUI01000006.1 | supercontig | OGUI01000006.1:622842..624622 - |
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