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ATCC64974_40910-T1, ATCC64974_40910-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_40910-T1
Unique NameATCC64974_40910-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000006.1:622842..624622-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_40910-T1 ID=ATCC64974_40910-T1|Name=ATCC64974_40910-T1|organism=Aspergillus niger N402|type=mRNA|length=1781bp|location=Sequence derived from alignment at OGUI01000006.1:622842..624622- (Aspergillus niger N402)
ATGGCCATGAATAAACCGCTCTCAGATCTCCAAGCGACCGGATATAGGCT
GCGCAAGTCACATGAGAAGTCCCGTAATGACTGCCTCAGATGCAAGCAGT
TACGCAAGAAGGTACTACACGAAGCATATGCTGTGCTTCCATCCTATACA
CTTCAGACCAATCATTCTGATTATATCGCCAGTGCGATGAAGCCAGACCG
AAATGCTCACGTTGCACCAGACTCTCGTACACATGTCAATATCAACACCG
TCCGAATACCAGCGAATCGGACACAGAGCCGACCGGTTTCCCGAACTCGG
AGATTGAATTCGCTGGATCCGAACTGACATCGAGGCGGCTCTCGAGCGAT
CGTCCATCGGGTCCTATCACTCCCTCCATTGATCAACTTCCCCTTTCGCC
ACAATCAAATGGCGGGGAAGATATACCCGGCTTAGACCTACCTTCCCCGG
ATCCTCTTAACGCGACCGAACTCAATCTTCTAGCTCATTACCTCTCGCAC
ACTAGCCAAACGATCCCATTCGATTCCCTCGACCTCTACGCTCTGGCTGT
CGGAGTACCTAATCTTGCCTTCAAATGCAAGGCAGTCATGTCATCCCTGC
TAAGCCTGGCAGCAGCATGCAGATGCCACGACATAGCAAATGAGAACACC
CAAAGACCCCTCGACACACGGACCTTAACAGAGATCAATGACCTCCTTGC
GTTAGCCGAACGCCATCACGCGGCATCTCTCCGCCACATCCAAGCCACGA
TGCAAATAACCGAATCCTACGATAACGTCCTCGCCAATGCAGCATTGATG
GTCTTGTACGCATCGGCCAGCCACTCCATTCGTGTCCACCTGGCAGCCAC
AGCTGAGAAATATGGACAGAGGCTGCCGACAGAATTATTGCCGCAACATT
CGCAGTGGATATCGTTCACACGCGCAGCGCATACGGCATCTAGCGCTATA
CTAAATGATATTGTTAACGCTACCCCTCCCAGCAGCACGGTGGTTGATAC
GGGATCAGAGTCCCATGAAGCAGTATCAAGTCCTTTATCACCGCAAGACG
GTCCATCTCCGGAAACGAAGAGCTTATTCCTCCCGCTCGTTGCATCTACC
TGTGATCGAGCTCTAGGAAATCTTCGTAGGAGAGCAGAACGCACAACTGC
AGAGCAGCGTTCCTCCGCTTTCTGTAGCGCGATTGACCAGCGACGGGCTC
ACGCATTACTGGAAACCATAACTATCCTGGAGAGCTGTGCATCAGCAGCG
CTATCGCCAGGGGCAAGTGATAAGGGGAAGGTTGTGTTCACAGCGTCTCC
AAATACTCAGCACACATCGGTGTTTGGATGTTCCCGTGGTGTCTCACCAT
GGGTGGCTCGATACATGATCAGTGTCACGTCTATGGAGGCACCGCAAATC
CTCCGACGTATCATTATGTCCTTTTTGAACAAGGCTCCGACCGAGTTTCT
CAACATCGTGCGATCGGTATTGGACTCTCCTACTGTAAAAGGTAGGAACG
AGAATACAACACTACCGGCTTCATCTGCAACCAGGGAGCCATTAATGGTC
ACTCCGATACATATCCTGGCTATGGATATATTCGCTCATTGGCTGGTTTT
AGTCATGTTATTGGATGGGGTGTGGTGGATCAGTAATATTGGACAGTGGG
AGCTCAGCCAAGTCATCTCTTTGATGAAAAGACAGAATGTCCTCTCCCAG
TTGGCTGACAGTAGCGAAATGTGGTGGCCCGAGAGTATGTACTTGGTTAA
GCGAGAGCTCACGCCCGATTCCTGGCATTAA
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Coding sequence (CDS) from alignment at OGUI01000006.1:622842..624622-

>ATCC64974_40910-T1 ID=ATCC64974_40910-T1|Name=ATCC64974_40910-T1|organism=Aspergillus niger N402|type=CDS|length=3420bp|location=Sequence derived from alignment at OGUI01000006.1:622842..624622- (Aspergillus niger N402)
TGCGATGAAGCCAGACCGAAATGCTCACGTTGCACCAGACTCTCGTACAC
ATGTCAATATCAACACCGTCCGAATACCAGCGAATCGGACACAGAGCCGA
CCGGTTTCCCGAACTCGGAGATTGAATTCGCTGGATCCGAACTGACATCG
AGGCGGCTCTCGAGCGATCGTCCATCGGGTCCTATCACTCCCTCCATTGA
TCAACTTCCCCTTTCGCCACAATCAAATGGCGGGGAAGATATACCCGGCT
TAGACCTACCTTCCCCGGATCCTCTTAACGCGACCGAACTCAATCTTCTA
GCTCATTACCTCTCGCACACTAGCCAAACGATCCCATTCGATTCCCTCGA
CCTCTACGCTCTGGCTGTCGGAGTACCTAATCTTGCCTTCAAATGCAAGG
CAGTCATGTCATCCCTGCTAAGCCTGGCAGCAGCATGCAGATGCCACGAC
ATAGCAAATGAGAACACCCAAAGACCCCTCGACACACGGACCTTAACAGA
GATCAATGACCTCCTTGCGTTAGCCGAACGCCATCACGCGGCATCTCTCC
GCCACATCCAAGCCACGATGCAAATAACCGAATCCTACGATAACGTCCTC
GCCAATGCAGCATTGATGGTCTTGTACGCATCGGCCAGCCACTCCATTCG
TGTCCACCTGGCAGCCACAGCTGAGAAATATGGACAGAGGCTGCCGACAG
AATTATTGCCGCAACATTCGCAGTGGATATCGTTCACACGCGCAGCGCAT
ACGGCATCTAGCGCTATACTAAATGATATTGTTAACGCTACCCCTCCCAG
CAGCACGGTGGTTGATACGGGATCAGAGTCCCATGAAGCAGTATCAAGTC
CTTTATCACCGCAAGACGGTCCATCTCCGGAAACGAAGAGCTTATTCCTC
CCGCTCGTTGCATCTACCTGTGATCGAGCTCTAGGAAATCTTCGTAGGAG
AGCAGAACGCACAACTGCAGAGCAGCGTTCCTCCGCTTTCTGTAGCGCGA
TTGACCAGCGACGGGCTCACGCATTACTGGAAACCATAACTATCCTGGAG
AGCTGTGCATCAGCAGCGCTATCGCCAGGGGCAAGTGATAAGGGGAAGGT
TGTGTTCACAGCGTCTCCAAATACTCAGCACACATCGGTGTTTGGATGTT
CCCGTGGTGTCTCACCATGGGTGGCTCGATACATGATCAGTGTCACGTCT
ATGGAGGCACCGCAAATCCTCCGACGTATCATTATGTCCTTTTTGAACAA
GGCTCCGACCGAGTTTCTCAACATCGTGCGATCGGTATTGGACTCTCCTA
CTGTAAAAGGTAGGAACGAGAATACAACACTACCGGCTTCATCTGCAACC
AGGGAGCCATTAATGGTCACTCCGATACATATCCTGGCTATGGATATATT
CGCTCATTGGCTGGTTTTAGTCATGTTATTGGATGGGGTGTGGTGGATCA
GTAATATTGGACAGTGGGAGCTCAGCCAAGTCATCTCTTTGATGAAAAGA
CAGAATGTCCTCTCCCAGTTGGCTGACAGTAGCGAAATGTGGTGGCCCGA
GAGTATGTACTTGGTTAAGCGAGAGCTCACGCCCGATTCCTGGCATTAAA
TGGCCATGAATAAACCGCTCTCAGATCTCCAAGCGACCGGATATAGGCTG
CGCAAGTCACATGAGAAGTCCCGTAATGACTGCCTCAGATGCAAGCAGTT
ACGCAAGAAGTGCGATGAAGCCAGACCGAAATGCTCACGTTGCACCAGAC
TCTCGTACACATGTCAATATCAACACCGTCCGAATACCAGCGAATCGGAC
ACAGAGCCGACCGGTTTCCCGAACTCGGAGATTGAATTCGCTGGATCCGA
ACTGACATCGAGGCGGCTCTCGAGCGATCGTCCATCGGGTCCTATCACTC
CCTCCATTGATCAACTTCCCCTTTCGCCACAATCAAATGGCGGGGAAGAT
ATACCCGGCTTAGACCTACCTTCCCCGGATCCTCTTAACGCGACCGAACT
CAATCTTCTAGCTCATTACCTCTCGCACACTAGCCAAACGATCCCATTCG
ATTCCCTCGACCTCTACGCTCTGGCTGTCGGAGTACCTAATCTTGCCTTC
AAATGCAAGGCAGTCATGTCATCCCTGCTAAGCCTGGCAGCAGCATGCAG
ATGCCACGACATAGCAAATGAGAACACCCAAAGACCCCTCGACACACGGA
CCTTAACAGAGATCAATGACCTCCTTGCGTTAGCCGAACGCCATCACGCG
GCATCTCTCCGCCACATCCAAGCCACGATGCAAATAACCGAATCCTACGA
TAACGTCCTCGCCAATGCAGCATTGATGGTCTTGTACGCATCGGCCAGCC
ACTCCATTCGTGTCCACCTGGCAGCCACAGCTGAGAAATATGGACAGAGG
CTGCCGACAGAATTATTGCCGCAACATTCGCAGTGGATATCGTTCACACG
CGCAGCGCATACGGCATCTAGCGCTATACTAAATGATATTGTTAACGCTA
CCCCTCCCAGCAGCACGGTGGTTGATACGGGATCAGAGTCCCATGAAGCA
GTATCAAGTCCTTTATCACCGCAAGACGGTCCATCTCCGGAAACGAAGAG
CTTATTCCTCCCGCTCGTTGCATCTACCTGTGATCGAGCTCTAGGAAATC
TTCGTAGGAGAGCAGAACGCACAACTGCAGAGCAGCGTTCCTCCGCTTTC
TGTAGCGCGATTGACCAGCGACGGGCTCACGCATTACTGGAAACCATAAC
TATCCTGGAGAGCTGTGCATCAGCAGCGCTATCGCCAGGGGCAAGTGATA
AGGGGAAGGTTGTGTTCACAGCGTCTCCAAATACTCAGCACACATCGGTG
TTTGGATGTTCCCGTGGTGTCTCACCATGGGTGGCTCGATACATGATCAG
TGTCACGTCTATGGAGGCACCGCAAATCCTCCGACGTATCATTATGTCCT
TTTTGAACAAGGCTCCGACCGAGTTTCTCAACATCGTGCGATCGGTATTG
GACTCTCCTACTGTAAAAGGTAGGAACGAGAATACAACACTACCGGCTTC
ATCTGCAACCAGGGAGCCATTAATGGTCACTCCGATACATATCCTGGCTA
TGGATATATTCGCTCATTGGCTGGTTTTAGTCATGTTATTGGATGGGGTG
TGGTGGATCAGTAATATTGGACAGTGGGAGCTCAGCCAAGTCATCTCTTT
GATGAAAAGACAGAATGTCCTCTCCCAGTTGGCTGACAGTAGCGAAATGT
GGTGGCCCGAGAGTATGTACTTGGTTAAGCGAGAGCTCACGCCCGATTCC
TGGCATTAAATGGCCATGAATAAACCGCTCTCAGATCTCCAAGCGACCGG
ATATAGGCTGCGCAAGTCACATGAGAAGTCCCGTAATGACTGCCTCAGAT
GCAAGCAGTTACGCAAGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_40910ATCC64974_40910Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_40910-T1ATCC64974_40910-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_40910-T1.cdsATCC64974_40910-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_40910-T1.exon2ATCC64974_40910-T1.exon2Aspergillus niger N402exon
ATCC64974_40910-T1.exon1ATCC64974_40910-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000006.1supercontigOGUI01000006.1:622842..624622 -
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