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ATCC64974_40960-T1, ATCC64974_40960-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_40960-T1
Unique NameATCC64974_40960-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000006.1:642120..643769+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_40960-T1 ID=ATCC64974_40960-T1|Name=ATCC64974_40960-T1|organism=Aspergillus niger N402|type=mRNA|length=1650bp|location=Sequence derived from alignment at OGUI01000006.1:642120..643769+ (Aspergillus niger N402)
ATGTTTCGAAAATCCGCTTCCTTCCTGGGCCAACGGCTCATGGCCGTTTG
TCTCCTGTGCTGGTGCGTTTCGCTAGCGACCGCCGCAAGCACAGAAGAAT
GGAAGACGCGATCCATCTACCAGACGATGACGGATCGTTTTGCCCTCACT
AATGGTTCGACCACCGCACCATGCAATACTACGGTAGCCAACTACTGTGG
CGGGTCTTGGCAGGGGACGATCGATAAGCTGGACTACATCCAAGGCATGG
GGTTCGATGCCATCATGATCTCTCCCGTAATTAAAAACATTGCGGGGCGA
TCTAAGGACGGTGAGGCCTACCATGGATACTGGCCTCTGGATCTATACGA
GATCAATTCTCATTTCGGAACCCGGGAGGAACTGTTGAAGCTGAGCGAGG
AGATCCACGCACGCGGCATGTACTTGCTGCTGGACGTCGTCATCAATAAT
ATGGCTTACATGACGGACGGCGAGGATCCTGCGACAACCATTGACTACAA
TGTTTTCCCTCAGTTCAATGGATCTTCATACTTCCACCCCTACTGCCTTA
TTACGAACTGGAACAACTATACGGACGCGCAGTGGTGTCAGACTGGTGAC
AATTATACTGCACTCCCAGATCTGTACACAGAACACACCGCGGTGCAGGA
CATCTTAATGGACTGGAGTAAATCGGTCATCAGCAATTACTCCGTCGACG
GGCTACGAATCGACGCTGCCAAGTCCCTCACTCCCAGCTTTCTGCCTACA
TATGCGAGTACCGTGGGCGGATTCATGACCGGCGAAGTCATGGATTCGAA
CGCCACCAACGTGTGCAAATATCAGACGGATTACCTGCCAAGTCTTCCCA
ACTACCCCCTCTATTACTCCATGATCACAGCCTTCCTCAACGGCGAGCCT
GCGACTTTGCTCGAGGAAATCGCGACGATCAATGATCTTTGCCCGGATAC
GTTCGCAATGGTCAACTTCATCGAAGATCAAGACGTTGACCGATGGGCCT
ACATGAATGACGACATTATGCTAGCTAAAACGGCACTGACCTTCATGATG
CTCTACGACGGTATCCCCTTGGTCTACCAGGGTCTGGAGCAGGCCATTGC
CTATTCCAACCGAGCGGCCTTGTGGTTGACGGATTTCGACACCAATGCGA
CGCTATATAAACACATCAAGAAACTCAATGCCATCCGCAAACATGCCATT
AACCTTGATTCCAGCTACATCAGTTCGAAAACATATCCCATCTATCAAGG
AGGTAGCGAGTTGGCTTTCTGGAAGGGCAAAAATGGACGCCAAGTCATCA
TGGTCTTATCTACGGCGGGGTCTGGTGGTTCGGCTTATACTCTGACACTA
CCTGTGAGCTATGGGGCAAGCGAGGTGGTCACGGAAGTGCTGAACTGCGT
CAACTATACGGTCAACACTTACAGTCAATTGGTCGTGGACATGGATAAGG
GCGAGCCTCGGGTCTTCTTTCCCGCTTCGATGATGCCGGGGAGCGGGCTG
TGTGGCTACAATACTTCTAATGTGACGTATTCTGAGCTGAGACTTGCTGC
TGTGGGCTCTTCGTCGTCTGCTGGTAGCCACTCTGTCATACCGTCTGCTT
TTTCTTTGCTTTTCATGGCGATAGTTGCATTTTTGGCATTCCGGATATAA
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Coding sequence (CDS) from alignment at OGUI01000006.1:642120..643769+

>ATCC64974_40960-T1 ID=ATCC64974_40960-T1|Name=ATCC64974_40960-T1|organism=Aspergillus niger N402|type=CDS|length=1650bp|location=Sequence derived from alignment at OGUI01000006.1:642120..643769+ (Aspergillus niger N402)
ATGTTTCGAAAATCCGCTTCCTTCCTGGGCCAACGGCTCATGGCCGTTTG
TCTCCTGTGCTGGTGCGTTTCGCTAGCGACCGCCGCAAGCACAGAAGAAT
GGAAGACGCGATCCATCTACCAGACGATGACGGATCGTTTTGCCCTCACT
AATGGTTCGACCACCGCACCATGCAATACTACGGTAGCCAACTACTGTGG
CGGGTCTTGGCAGGGGACGATCGATAAGCTGGACTACATCCAAGGCATGG
GGTTCGATGCCATCATGATCTCTCCCGTAATTAAAAACATTGCGGGGCGA
TCTAAGGACGGTGAGGCCTACCATGGATACTGGCCTCTGGATCTATACGA
GATCAATTCTCATTTCGGAACCCGGGAGGAACTGTTGAAGCTGAGCGAGG
AGATCCACGCACGCGGCATGTACTTGCTGCTGGACGTCGTCATCAATAAT
ATGGCTTACATGACGGACGGCGAGGATCCTGCGACAACCATTGACTACAA
TGTTTTCCCTCAGTTCAATGGATCTTCATACTTCCACCCCTACTGCCTTA
TTACGAACTGGAACAACTATACGGACGCGCAGTGGTGTCAGACTGGTGAC
AATTATACTGCACTCCCAGATCTGTACACAGAACACACCGCGGTGCAGGA
CATCTTAATGGACTGGAGTAAATCGGTCATCAGCAATTACTCCGTCGACG
GGCTACGAATCGACGCTGCCAAGTCCCTCACTCCCAGCTTTCTGCCTACA
TATGCGAGTACCGTGGGCGGATTCATGACCGGCGAAGTCATGGATTCGAA
CGCCACCAACGTGTGCAAATATCAGACGGATTACCTGCCAAGTCTTCCCA
ACTACCCCCTCTATTACTCCATGATCACAGCCTTCCTCAACGGCGAGCCT
GCGACTTTGCTCGAGGAAATCGCGACGATCAATGATCTTTGCCCGGATAC
GTTCGCAATGGTCAACTTCATCGAAGATCAAGACGTTGACCGATGGGCCT
ACATGAATGACGACATTATGCTAGCTAAAACGGCACTGACCTTCATGATG
CTCTACGACGGTATCCCCTTGGTCTACCAGGGTCTGGAGCAGGCCATTGC
CTATTCCAACCGAGCGGCCTTGTGGTTGACGGATTTCGACACCAATGCGA
CGCTATATAAACACATCAAGAAACTCAATGCCATCCGCAAACATGCCATT
AACCTTGATTCCAGCTACATCAGTTCGAAAACATATCCCATCTATCAAGG
AGGTAGCGAGTTGGCTTTCTGGAAGGGCAAAAATGGACGCCAAGTCATCA
TGGTCTTATCTACGGCGGGGTCTGGTGGTTCGGCTTATACTCTGACACTA
CCTGTGAGCTATGGGGCAAGCGAGGTGGTCACGGAAGTGCTGAACTGCGT
CAACTATACGGTCAACACTTACAGTCAATTGGTCGTGGACATGGATAAGG
GCGAGCCTCGGGTCTTCTTTCCCGCTTCGATGATGCCGGGGAGCGGGCTG
TGTGGCTACAATACTTCTAATGTGACGTATTCTGAGCTGAGACTTGCTGC
TGTGGGCTCTTCGTCGTCTGCTGGTAGCCACTCTGTCATACCGTCTGCTT
TTTCTTTGCTTTTCATGGCGATAGTTGCATTTTTGGCATTCCGGATATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004556alpha-amylase activity
GO:0005509calcium ion binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0016052carbohydrate catabolic process
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_40960ATCC64974_40960Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_40960-T1.exon1ATCC64974_40960-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_40960-T1.cdsATCC64974_40960-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_40960-T1ATCC64974_40960-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-28)
NoteCAZy:GH13_15
NoteCAZy:GH13_27
NoteCAZy:GH13_7
NoteCAZy:GH13_19
NoteCAZy:GH13_20
NoteCAZy:GH13_36
NoteCAZy:GH13_2
NoteCAZy:GH13
NoteCAZy:GH13_1
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR013777
DBxrefInterPro:IPR013780
DBxrefInterPro:IPR015340
DBxrefInterPro:IPR006047
DBxrefPFAM:PF09260
DBxrefPFAM:PF00128
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000006.1supercontigOGUI01000006.1:642120..643769 +
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