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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000006.1:646569..647768+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_40990-T1 ID=ATCC64974_40990-T1|Name=ATCC64974_40990-T1|organism=Aspergillus niger N402|type=mRNA|length=1200bp|location=Sequence derived from alignment at OGUI01000006.1:646569..647768+ (Aspergillus niger N402)
ATGTCGCTCCGCAAAAGGTCTTGCTTATCATGTGTTGCAGCCAAACGTCG
GTGCGACCTGGAAAGACCCAGTTGCGCCCGCTGTCGGAAGAAGAGCGCTG
CGTGTCGGTACCCATACCCGCCTCCACAGAATGCAGAGGATCAGATCACA
GCACCCGAGGACCGCCAACATACCCGTAATGCCAGCAACTCTGGTATCTT
GGAAGCAAGCGATATCATGCTTGTAGATAGCCGCATAGACCGATCTACGA
ATCTCTACCCTAGAGAGGAATATTTCGACCCACTCCTATGGTTGCCGGAC
GGTCCGACGAGCCCAACTCAGGCCTGGGCCATAGAACCGGACGAGTGGTT
GTCTCTCAGAAGGGCATTAGATGGATCATCATCCGCATTGCTACCCCGAC
TGGAACGCAGAGTCTTGGAGTTTTGGCCTCGGGTCAACGATACGCAAACC
TGGCGCTTTTGCATCCGAACGTTTCTAGGCTATGTCGATCATTTCTTGAA
CACCGGCACACTGCCTCTCGTTGAGTCACTGTCAAACCGTCAAGGGGATC
TTTCGCCTGTTCTGCTGGAAGCCTATGGAGTTTGTGCCGCATATCGCACC
TGTCAGCGTGCAACCCAGCCTTTTTACCTCCAGTTGTTAAAGACAGGAAT
CAATAATGCGGGCACGAGAGACTTGTCACAAGCGGAACTACAGCATCAAC
TGGATCACCTACAAGCTTCGATTCTATATTATGTTCTTTTCCTTGCGGGT
GGTGTCAGTGATCAGTCCATGTTTATCCAGCTGGACTACATGTTAGCGCA
GACAACAGCCAATCTAGAACGAAGAGAATTAGAACTTCGGCAGACATCTT
TCGCGAACTACGTGGAGAATCGAGTGCTTTGTGAAAATTCTCGGCGACTC
ATCTTGGTGTCTTACCTGGTGCGTGCTGTCCATGCCGTGGTCCACTTTCA
CAGATGCGATTTCATCAAATATCTGGCTGGTCTACCGGTCTCCACTCAGT
CAAACGCGGATATGTACATAGAGAGGAATTTTAGTGAAGGACAAACCCCT
GCGCAACTGACATCTGGGGTTGTGTCCTATGATGAATTCGTGAGTGTCTG
GGAGCAAGGGGGGCTGCTTCATGTGGATGATTTCAGATTCCTTTTGCTGG
TGGCGTGCAAAGGGTTGGACATGGTGCAAGGGAAAGTACTTGGTAGCTGA
back to topCoding sequence (CDS) from alignment at OGUI01000006.1:646569..647768+ >ATCC64974_40990-T1 ID=ATCC64974_40990-T1|Name=ATCC64974_40990-T1|organism=Aspergillus niger N402|type=CDS|length=1200bp|location=Sequence derived from alignment at OGUI01000006.1:646569..647768+ (Aspergillus niger N402)
ATGTCGCTCCGCAAAAGGTCTTGCTTATCATGTGTTGCAGCCAAACGTCG
GTGCGACCTGGAAAGACCCAGTTGCGCCCGCTGTCGGAAGAAGAGCGCTG
CGTGTCGGTACCCATACCCGCCTCCACAGAATGCAGAGGATCAGATCACA
GCACCCGAGGACCGCCAACATACCCGTAATGCCAGCAACTCTGGTATCTT
GGAAGCAAGCGATATCATGCTTGTAGATAGCCGCATAGACCGATCTACGA
ATCTCTACCCTAGAGAGGAATATTTCGACCCACTCCTATGGTTGCCGGAC
GGTCCGACGAGCCCAACTCAGGCCTGGGCCATAGAACCGGACGAGTGGTT
GTCTCTCAGAAGGGCATTAGATGGATCATCATCCGCATTGCTACCCCGAC
TGGAACGCAGAGTCTTGGAGTTTTGGCCTCGGGTCAACGATACGCAAACC
TGGCGCTTTTGCATCCGAACGTTTCTAGGCTATGTCGATCATTTCTTGAA
CACCGGCACACTGCCTCTCGTTGAGTCACTGTCAAACCGTCAAGGGGATC
TTTCGCCTGTTCTGCTGGAAGCCTATGGAGTTTGTGCCGCATATCGCACC
TGTCAGCGTGCAACCCAGCCTTTTTACCTCCAGTTGTTAAAGACAGGAAT
CAATAATGCGGGCACGAGAGACTTGTCACAAGCGGAACTACAGCATCAAC
TGGATCACCTACAAGCTTCGATTCTATATTATGTTCTTTTCCTTGCGGGT
GGTGTCAGTGATCAGTCCATGTTTATCCAGCTGGACTACATGTTAGCGCA
GACAACAGCCAATCTAGAACGAAGAGAATTAGAACTTCGGCAGACATCTT
TCGCGAACTACGTGGAGAATCGAGTGCTTTGTGAAAATTCTCGGCGACTC
ATCTTGGTGTCTTACCTGGTGCGTGCTGTCCATGCCGTGGTCCACTTTCA
CAGATGCGATTTCATCAAATATCTGGCTGGTCTACCGGTCTCCACTCAGT
CAAACGCGGATATGTACATAGAGAGGAATTTTAGTGAAGGACAAACCCCT
GCGCAACTGACATCTGGGGTTGTGTCCTATGATGAATTCGTGAGTGTCTG
GGAGCAAGGGGGGCTGCTTCATGTGGATGATTTCAGATTCCTTTTGCTGG
TGGCGTGCAAAGGGTTGGACATGGTGCAAGGGAAAGTACTTGGTAGCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_40990-T1 | ATCC64974_40990-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000006.1 | supercontig | OGUI01000006.1:646569..647768 + |
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