You are here

Home

ATCC64974_41090-T1, ATCC64974_41090-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_41090-T1
Unique NameATCC64974_41090-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000006.1:672612..673815+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_41090-T1 ID=ATCC64974_41090-T1|Name=ATCC64974_41090-T1|organism=Aspergillus niger N402|type=mRNA|length=1204bp|location=Sequence derived from alignment at OGUI01000006.1:672612..673815+ (Aspergillus niger N402)
ATGTCCCAAGAAAAGAAGCTCTTCGTTGTATTCGGTGCCACGGGTATCCA
AGGTGGCTCGGTTGCTCGAGCGATTCTGGCCGATCCTATCGCATCAAAAC
AGTTCAATGTCCGGGCCATCACCAGAGACCCTTCGAAGCCGGCTGCTAGA
AGTTTAGCTCAGCAGGGTGCGGAGCTGATGAAGGTAGGTCATACCTGATT
GGAGTCGCTGTACAAAACCACTGATAGATAATGACAATAGGCCGACCTTG
AAGACAAAGACTCTCTCCGCTTGGCTCTCAAAGATGCTTATGCTGTCTTC
GCCGTTACCAACTTCTGGGAGACCTTTGATGCTGCCGCCGAGACTAGACA
AGGCATGAACGTAGCTGATGTTGCTAAGGTAAGACATACTAGCAGCATTG
TGGAGATATACTAACATCAGCAGGAGCTGGATGTCAAACATCTTATTTGG
AGTAGCTTGCCCGGTATCTCGCGGAGTAAGTCTTTTTTCCCTTTAGTCTA
CTGCGCCACATTCGTTGTTGTCAGCTGAGACTAACAAACAAATAGTCACC
AATGATAGACTCACCGGAGTGGTGCACTTTGACAACAAAGCCCGTGTTGA
CGACTATATCCGCGAGCTCTCAATCCCACACACCATTGTCGCTCTTGCCA
TCTATGCTGCCTTTTTCTTCGAGATACTGACACCCCTTCCGACAGCACCT
CCCTCATACGTGCTAGCATTCCCCGAGCCAACAAGTGCCCAAACAACGGT
ACCCATTATTGACCCCACTGCTGACCTGGGTAAGTTTGTCAAGGGCATCC
TTCTGAACCCCGGCAAGACGCTGGGTCAAAACTTTAATGTCGCCGGGAAG
GAATATACTTTTGAGGAAATCGTCTCAGCCGCGAAGGGTATGGGTGTGGA
TATAAGTTTCCAACCGGTGGATAAGGAGACCTTCAAGGCTGGAATGGCTG
CCAAGGGTTTCCCGAACGTCATTTGTGAGGGTGTATCTCAGGCCGCTCAG
TATATTCATGAGTATGGTTATTTCGGTGGGGCAGGTTTCGAGGAAAGCCA
CAAAGTAGGTAACTCAGAGGATCTTGATTCTGGACAGTACTGACTGCTAA
TTCGCATTGTAATAGGTTTTGTTGGATCCCTTGACTACACTGGAGGAAAC
ACTGAGGAACAGCGCGATTTTGTCGCAGTTGAAAAATGGGGTGGATGTAA
CTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000006.1:672612..673815+

>ATCC64974_41090-T1 ID=ATCC64974_41090-T1|Name=ATCC64974_41090-T1|organism=Aspergillus niger N402|type=CDS|length=4875bp|location=Sequence derived from alignment at OGUI01000006.1:672612..673815+ (Aspergillus niger N402)
ATGTCCCAAGAAAAGAAGCTCTTCGTTGTATTCGGTGCCACGGGTATCCA
AGGTGGCTCGGTTGCTCGAGCGATTCTGGCCGATCCTATCGCATCAAAAC
AGTTCAATGTCCGGGCCATCACCAGAGACCCTTCGAAGCCGGCTGCTAGA
AGTTTAGCTCAGCAGGGTGCGGAGCTGATGAAGGCCGACCTTGAAGACAA
AGACTCTCTCCGCTTGGCTCTCAAAGATGCTTATGCTGTCTTCGCCGTTA
CCAACTTCTGGGAGACCTTTGATGCTGCCGCCGAGACTAGACAAGGCATG
AACGTAGCTGATGTTGCTAAGGAGCTGGATGTCAAACATCTTATTTGGAG
TAGCTTGCCCGGTATCTCGCGGATCACCAATGATAGACTCACCGGAGTGG
TGCACTTTGACAACAAAGCCCGTGTTGACGACTATATCCGCGAGCTCTCA
ATCCCACACACCATTGTCGCTCTTGCCATCTATGCTGCCTTTTTCTTCGA
GATACTGACACCCCTTCCGACAGCACCTCCCTCATACGTGCTAGCATTCC
CCGAGCCAACAAGTGCCCAAACAACGGTACCCATTATTGACCCCACTGCT
GACCTGGGTAAGTTTGTCAAGGGCATCCTTCTGAACCCCGGCAAGACGCT
GGGTCAAAACTTTAATGTCGCCGGGAAGGAATATACTTTTGAGGAAATCG
TCTCAGCCGCGAAGGGTATGGGTGTGGATATAAGTTTCCAACCGGTGGAT
AAGGAGACCTTCAAGGCTGGAATGGCTGCCAAGGGTTTCCCGAACGTCAT
TTGTGAGGGTGTATCTCAGGCCGCTCAGTATATTCATGAGTATGGTTATT
TCGGTGGGGCAGGTTTCGAGGAAAGCCACAAAGTAGGTTTTGTTGGATCC
CTTGACTACACTGGAGGAAACACTGAGGAACAGCGCGATTTTGTCGCAGT
TGAAAAATGGGGTGGATGTAACTAAATGTCCCAAGAAAAGAAGCTCTTCG
TTGTATTCGGTGCCACGGGTATCCAAGGTGGCTCGGTTGCTCGAGCGATT
CTGGCCGATCCTATCGCATCAAAACAGTTCAATGTCCGGGCCATCACCAG
AGACCCTTCGAAGCCGGCTGCTAGAAGTTTAGCTCAGCAGGGTGCGGAGC
TGATGAAGGCCGACCTTGAAGACAAAGACTCTCTCCGCTTGGCTCTCAAA
GATGCTTATGCTGTCTTCGCCGTTACCAACTTCTGGGAGACCTTTGATGC
TGCCGCCGAGACTAGACAAGGCATGAACGTAGCTGATGTTGCTAAGGAGC
TGGATGTCAAACATCTTATTTGGAGTAGCTTGCCCGGTATCTCGCGGATC
ACCAATGATAGACTCACCGGAGTGGTGCACTTTGACAACAAAGCCCGTGT
TGACGACTATATCCGCGAGCTCTCAATCCCACACACCATTGTCGCTCTTG
CCATCTATGCTGCCTTTTTCTTCGAGATACTGACACCCCTTCCGACAGCA
CCTCCCTCATACGTGCTAGCATTCCCCGAGCCAACAAGTGCCCAAACAAC
GGTACCCATTATTGACCCCACTGCTGACCTGGGTAAGTTTGTCAAGGGCA
TCCTTCTGAACCCCGGCAAGACGCTGGGTCAAAACTTTAATGTCGCCGGG
AAGGAATATACTTTTGAGGAAATCGTCTCAGCCGCGAAGGGTATGGGTGT
GGATATAAGTTTCCAACCGGTGGATAAGGAGACCTTCAAGGCTGGAATGG
CTGCCAAGGGTTTCCCGAACGTCATTTGTGAGGGTGTATCTCAGGCCGCT
CAGTATATTCATGAGTATGGTTATTTCGGTGGGGCAGGTTTCGAGGAAAG
CCACAAAGTAGGTTTTGTTGGATCCCTTGACTACACTGGAGGAAACACTG
AGGAACAGCGCGATTTTGTCGCAGTTGAAAAATGGGGTGGATGTAACTAA
ATGTCCCAAGAAAAGAAGCTCTTCGTTGTATTCGGTGCCACGGGTATCCA
AGGTGGCTCGGTTGCTCGAGCGATTCTGGCCGATCCTATCGCATCAAAAC
AGTTCAATGTCCGGGCCATCACCAGAGACCCTTCGAAGCCGGCTGCTAGA
AGTTTAGCTCAGCAGGGTGCGGAGCTGATGAAGGCCGACCTTGAAGACAA
AGACTCTCTCCGCTTGGCTCTCAAAGATGCTTATGCTGTCTTCGCCGTTA
CCAACTTCTGGGAGACCTTTGATGCTGCCGCCGAGACTAGACAAGGCATG
AACGTAGCTGATGTTGCTAAGGAGCTGGATGTCAAACATCTTATTTGGAG
TAGCTTGCCCGGTATCTCGCGGATCACCAATGATAGACTCACCGGAGTGG
TGCACTTTGACAACAAAGCCCGTGTTGACGACTATATCCGCGAGCTCTCA
ATCCCACACACCATTGTCGCTCTTGCCATCTATGCTGCCTTTTTCTTCGA
GATACTGACACCCCTTCCGACAGCACCTCCCTCATACGTGCTAGCATTCC
CCGAGCCAACAAGTGCCCAAACAACGGTACCCATTATTGACCCCACTGCT
GACCTGGGTAAGTTTGTCAAGGGCATCCTTCTGAACCCCGGCAAGACGCT
GGGTCAAAACTTTAATGTCGCCGGGAAGGAATATACTTTTGAGGAAATCG
TCTCAGCCGCGAAGGGTATGGGTGTGGATATAAGTTTCCAACCGGTGGAT
AAGGAGACCTTCAAGGCTGGAATGGCTGCCAAGGGTTTCCCGAACGTCAT
TTGTGAGGGTGTATCTCAGGCCGCTCAGTATATTCATGAGTATGGTTATT
TCGGTGGGGCAGGTTTCGAGGAAAGCCACAAAGTAGGTTTTGTTGGATCC
CTTGACTACACTGGAGGAAACACTGAGGAACAGCGCGATTTTGTCGCAGT
TGAAAAATGGGGTGGATGTAACTAAATGTCCCAAGAAAAGAAGCTCTTCG
TTGTATTCGGTGCCACGGGTATCCAAGGTGGCTCGGTTGCTCGAGCGATT
CTGGCCGATCCTATCGCATCAAAACAGTTCAATGTCCGGGCCATCACCAG
AGACCCTTCGAAGCCGGCTGCTAGAAGTTTAGCTCAGCAGGGTGCGGAGC
TGATGAAGGCCGACCTTGAAGACAAAGACTCTCTCCGCTTGGCTCTCAAA
GATGCTTATGCTGTCTTCGCCGTTACCAACTTCTGGGAGACCTTTGATGC
TGCCGCCGAGACTAGACAAGGCATGAACGTAGCTGATGTTGCTAAGGAGC
TGGATGTCAAACATCTTATTTGGAGTAGCTTGCCCGGTATCTCGCGGATC
ACCAATGATAGACTCACCGGAGTGGTGCACTTTGACAACAAAGCCCGTGT
TGACGACTATATCCGCGAGCTCTCAATCCCACACACCATTGTCGCTCTTG
CCATCTATGCTGCCTTTTTCTTCGAGATACTGACACCCCTTCCGACAGCA
CCTCCCTCATACGTGCTAGCATTCCCCGAGCCAACAAGTGCCCAAACAAC
GGTACCCATTATTGACCCCACTGCTGACCTGGGTAAGTTTGTCAAGGGCA
TCCTTCTGAACCCCGGCAAGACGCTGGGTCAAAACTTTAATGTCGCCGGG
AAGGAATATACTTTTGAGGAAATCGTCTCAGCCGCGAAGGGTATGGGTGT
GGATATAAGTTTCCAACCGGTGGATAAGGAGACCTTCAAGGCTGGAATGG
CTGCCAAGGGTTTCCCGAACGTCATTTGTGAGGGTGTATCTCAGGCCGCT
CAGTATATTCATGAGTATGGTTATTTCGGTGGGGCAGGTTTCGAGGAAAG
CCACAAAGTAGGTTTTGTTGGATCCCTTGACTACACTGGAGGAAACACTG
AGGAACAGCGCGATTTTGTCGCAGTTGAAAAATGGGGTGGATGTAACTAA
ATGTCCCAAGAAAAGAAGCTCTTCGTTGTATTCGGTGCCACGGGTATCCA
AGGTGGCTCGGTTGCTCGAGCGATTCTGGCCGATCCTATCGCATCAAAAC
AGTTCAATGTCCGGGCCATCACCAGAGACCCTTCGAAGCCGGCTGCTAGA
AGTTTAGCTCAGCAGGGTGCGGAGCTGATGAAGGCCGACCTTGAAGACAA
AGACTCTCTCCGCTTGGCTCTCAAAGATGCTTATGCTGTCTTCGCCGTTA
CCAACTTCTGGGAGACCTTTGATGCTGCCGCCGAGACTAGACAAGGCATG
AACGTAGCTGATGTTGCTAAGGAGCTGGATGTCAAACATCTTATTTGGAG
TAGCTTGCCCGGTATCTCGCGGATCACCAATGATAGACTCACCGGAGTGG
TGCACTTTGACAACAAAGCCCGTGTTGACGACTATATCCGCGAGCTCTCA
ATCCCACACACCATTGTCGCTCTTGCCATCTATGCTGCCTTTTTCTTCGA
GATACTGACACCCCTTCCGACAGCACCTCCCTCATACGTGCTAGCATTCC
CCGAGCCAACAAGTGCCCAAACAACGGTACCCATTATTGACCCCACTGCT
GACCTGGGTAAGTTTGTCAAGGGCATCCTTCTGAACCCCGGCAAGACGCT
GGGTCAAAACTTTAATGTCGCCGGGAAGGAATATACTTTTGAGGAAATCG
TCTCAGCCGCGAAGGGTATGGGTGTGGATATAAGTTTCCAACCGGTGGAT
AAGGAGACCTTCAAGGCTGGAATGGCTGCCAAGGGTTTCCCGAACGTCAT
TTGTGAGGGTGTATCTCAGGCCGCTCAGTATATTCATGAGTATGGTTATT
TCGGTGGGGCAGGTTTCGAGGAAAGCCACAAAGTAGGTTTTGTTGGATCC
CTTGACTACACTGGAGGAAACACTGAGGAACAGCGCGATTTTGTCGCAGT
TGAAAAATGGGGTGGATGTAACTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_41090ATCC64974_41090Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_41090-T1ATCC64974_41090-T1-proteinAspergillus niger N402polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_41090-T1.exon1ATCC64974_41090-T1.exon1Aspergillus niger N402exon
ATCC64974_41090-T1.exon2ATCC64974_41090-T1.exon2Aspergillus niger N402exon
ATCC64974_41090-T1.exon3ATCC64974_41090-T1.exon3Aspergillus niger N402exon
ATCC64974_41090-T1.exon4ATCC64974_41090-T1.exon4Aspergillus niger N402exon
ATCC64974_41090-T1.exon5ATCC64974_41090-T1.exon5Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_41090-T1.cdsATCC64974_41090-T1.cdsAspergillus niger N402CDS


Properties
Property NameValue
NoteantiSMASH:Cluster_10000061.3
NoteEggNog:ENOG41
NoteSMCOG1199:NmrA family protein
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008030
DBxrefPFAM:PF05368
DBxrefPFAM:PF13460
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000006.1supercontigOGUI01000006.1:672612..673815 +
Powered by Drupal