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ATCC64974_4110-T1, ATCC64974_4110-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_4110-T1
Unique NameATCC64974_4110-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:1254302..1255689-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_4110-T1 ID=ATCC64974_4110-T1|Name=ATCC64974_4110-T1|organism=Aspergillus niger N402|type=mRNA|length=1388bp|location=Sequence derived from alignment at OGUI01000001.1:1254302..1255689- (Aspergillus niger N402)
ATGACGGACAAGCTCCCCCCTCCGCTTCTGGCGCTCTTCCAACCTCGCCC
GCCTCTGCGTTATGTCACCCCCATCAACCGTGCCCCAGAAGACTGCAAGA
AGAGTAGCATCGGTGGTATTGCGCAGTTCCTTCCTGAGGTGAAGAAGTAT
GAGGAAGAGATCCCATATACGCCTACGGAAAGCTGGATCCAGCGCAAACT
GCGCCAGAAAGTGGAGAAGAAAGAGAACATTAACAAGCAATTGACGGAAG
GCCTCGAGACCTGTATGATCATCGCATCTATTCTGGGCTATATCAGTGTC
AATACTGATGATTTGCTGCAGATGAACCATCCAACGACCAACAAGCACGA
GGCGACCCGTTCAAGACGCTGTTTGTCGCTAGACTGAGCTACGATGTCAA
GGAATCGGACCTGGAACGGGAATTTGGTCGTTTCGGCCCTATTGAACGGG
TACAGTCACAGGCCGAGCGGGCTTGATGGGTTACACGCATCACTGACGTC
TCCCAGATTCGCATCGTGAAAGACACCGTAACGCCAAAGGGCTCGAAGAA
ACCACACAGGGGATATGCTTTTATTGTCTATGAGCGCGAAAAGGATATGA
AAGGTATTGCTACAGATCTAGTCGCCTGTCACTCTGGATTCACACTGGTA
TCGAATCCCCGTACTTCATTGATGCTAACCTAGTTTTCTTTTGTCACGAA
TTCAGCTGCCTACAAGGAAACGGATGGTATCCGCATCAAGGACCGCCGTG
TCTTGGTAGACGTCGAGCGCGGTCGTACAGTCAAGGGATGGAAGCCTCGT
CGCTTTGGTGGTGGTCTTGGAGGTCGTGGTTACACCAAGGCTTTGCCGTC
TCGACCTATCGGCCCTGGCTCTTTCAACGCCCCCTCTGGTCCCGGCGGCT
ATGGTGGTGGATTCCGGGGTGGGTTCGGTGGCCGAGGTGGTTTCAAGGGA
GGATTCCGCGGTGACCGTGGATTTGGTGGGCCCCGCGGGGGTGTTGGATA
CCAAGGTGGTCGCAACGGATTCGGTGGAGGCGGACAGGCTCCCCCCAACG
CCCCTTCAGGTCCGGGAGGCGGACGCAGCGGTGGGTTTGGTGGTCCCCCT
GGCGGCGGCAGATTTGAGCGTGAACCCCGGGGCGCCACTGGCAGCAACAG
AGAACCCATCAGGCCCCGGGACGGGTTTGGCGACCGCGATCGTCGAGACC
GTGATCGGGACCGCGACGGTGACCGTCACCGGGACCGTGATCGGGATAGT
TATCGCTACCGTGACCGCGACCGTGAACGCGACCGCGATCGTGGTGACAG
GTACGGAGGCCGGGGCGACGACTACGGGCGGAAGCGATACCATGAAGATG
ATTCGTATGATGACCCCCGTGCGAAGAGAAGATACTGA
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Coding sequence (CDS) from alignment at OGUI01000001.1:1254302..1255689-

>ATCC64974_4110-T1 ID=ATCC64974_4110-T1|Name=ATCC64974_4110-T1|organism=Aspergillus niger N402|type=CDS|length=4680bp|location=Sequence derived from alignment at OGUI01000001.1:1254302..1255689- (Aspergillus niger N402)
CTGCCTACAAGGAAACGGATGGTATCCGCATCAAGGACCGCCGTGTCTTG
GTAGACGTCGAGCGCGGTCGTACAGTCAAGGGATGGAAGCCTCGTCGCTT
TGGTGGTGGTCTTGGAGGTCGTGGTTACACCAAGGCTTTGCCGTCTCGAC
CTATCGGCCCTGGCTCTTTCAACGCCCCCTCTGGTCCCGGCGGCTATGGT
GGTGGATTCCGGGGTGGGTTCGGTGGCCGAGGTGGTTTCAAGGGAGGATT
CCGCGGTGACCGTGGATTTGGTGGGCCCCGCGGGGGTGTTGGATACCAAG
GTGGTCGCAACGGATTCGGTGGAGGCGGACAGGCTCCCCCCAACGCCCCT
TCAGGTCCGGGAGGCGGACGCAGCGGTGGGTTTGGTGGTCCCCCTGGCGG
CGGCAGATTTGAGCGTGAACCCCGGGGCGCCACTGGCAGCAACAGAGAAC
CCATCAGGCCCCGGGACGGGTTTGGCGACCGCGATCGTCGAGACCGTGAT
CGGGACCGCGACGGTGACCGTCACCGGGACCGTGATCGGGATAGTTATCG
CTACCGTGACCGCGACCGTGAACGCGACCGCGATCGTGGTGACAGGTACG
GAGGCCGGGGCGACGACTACGGGCGGAAGCGATACCATGAAGATGATTCG
TATGATGACCCCCGTGCGAAGAGAAGATACTGAATTCGCATCGTGAAAGA
CACCGTAACGCCAAAGGGCTCGAAGAAACCACACAGGGGATATGCTTTTA
TTGTCTATGAGCGCGAAAAGGATATGAAAGATGAACCATCCAACGACCAA
CAAGCACGAGGCGACCCGTTCAAGACGCTGTTTGTCGCTAGACTGAGCTA
CGATGTCAAGGAATCGGACCTGGAACGGGAATTTGGTCGTTTCGGCCCTA
TTGAACGGATGACGGACAAGCTCCCCCCTCCGCTTCTGGCGCTCTTCCAA
CCTCGCCCGCCTCTGCGTTATGTCACCCCCATCAACCGTGCCCCAGAAGA
CTGCAAGAAGAGTAGCATCGGTGGTATTGCGCAGTTCCTTCCTGAGGTGA
AGAAGTATGAGGAAGAGATCCCATATACGCCTACGGAAAGCTGGATCCAG
CGCAAACTGCGCCAGAAAGTGGAGAAGAAAGAGAACATTAACAAGCAATT
GACGGAAGGCCTCGAGACCTCTGCCTACAAGGAAACGGATGGTATCCGCA
TCAAGGACCGCCGTGTCTTGGTAGACGTCGAGCGCGGTCGTACAGTCAAG
GGATGGAAGCCTCGTCGCTTTGGTGGTGGTCTTGGAGGTCGTGGTTACAC
CAAGGCTTTGCCGTCTCGACCTATCGGCCCTGGCTCTTTCAACGCCCCCT
CTGGTCCCGGCGGCTATGGTGGTGGATTCCGGGGTGGGTTCGGTGGCCGA
GGTGGTTTCAAGGGAGGATTCCGCGGTGACCGTGGATTTGGTGGGCCCCG
CGGGGGTGTTGGATACCAAGGTGGTCGCAACGGATTCGGTGGAGGCGGAC
AGGCTCCCCCCAACGCCCCTTCAGGTCCGGGAGGCGGACGCAGCGGTGGG
TTTGGTGGTCCCCCTGGCGGCGGCAGATTTGAGCGTGAACCCCGGGGCGC
CACTGGCAGCAACAGAGAACCCATCAGGCCCCGGGACGGGTTTGGCGACC
GCGATCGTCGAGACCGTGATCGGGACCGCGACGGTGACCGTCACCGGGAC
CGTGATCGGGATAGTTATCGCTACCGTGACCGCGACCGTGAACGCGACCG
CGATCGTGGTGACAGGTACGGAGGCCGGGGCGACGACTACGGGCGGAAGC
GATACCATGAAGATGATTCGTATGATGACCCCCGTGCGAAGAGAAGATAC
TGAATTCGCATCGTGAAAGACACCGTAACGCCAAAGGGCTCGAAGAAACC
ACACAGGGGATATGCTTTTATTGTCTATGAGCGCGAAAAGGATATGAAAG
ATGAACCATCCAACGACCAACAAGCACGAGGCGACCCGTTCAAGACGCTG
TTTGTCGCTAGACTGAGCTACGATGTCAAGGAATCGGACCTGGAACGGGA
ATTTGGTCGTTTCGGCCCTATTGAACGGATGACGGACAAGCTCCCCCCTC
CGCTTCTGGCGCTCTTCCAACCTCGCCCGCCTCTGCGTTATGTCACCCCC
ATCAACCGTGCCCCAGAAGACTGCAAGAAGAGTAGCATCGGTGGTATTGC
GCAGTTCCTTCCTGAGGTGAAGAAGTATGAGGAAGAGATCCCATATACGC
CTACGGAAAGCTGGATCCAGCGCAAACTGCGCCAGAAAGTGGAGAAGAAA
GAGAACATTAACAAGCAATTGACGGAAGGCCTCGAGACCTCTGCCTACAA
GGAAACGGATGGTATCCGCATCAAGGACCGCCGTGTCTTGGTAGACGTCG
AGCGCGGTCGTACAGTCAAGGGATGGAAGCCTCGTCGCTTTGGTGGTGGT
CTTGGAGGTCGTGGTTACACCAAGGCTTTGCCGTCTCGACCTATCGGCCC
TGGCTCTTTCAACGCCCCCTCTGGTCCCGGCGGCTATGGTGGTGGATTCC
GGGGTGGGTTCGGTGGCCGAGGTGGTTTCAAGGGAGGATTCCGCGGTGAC
CGTGGATTTGGTGGGCCCCGCGGGGGTGTTGGATACCAAGGTGGTCGCAA
CGGATTCGGTGGAGGCGGACAGGCTCCCCCCAACGCCCCTTCAGGTCCGG
GAGGCGGACGCAGCGGTGGGTTTGGTGGTCCCCCTGGCGGCGGCAGATTT
GAGCGTGAACCCCGGGGCGCCACTGGCAGCAACAGAGAACCCATCAGGCC
CCGGGACGGGTTTGGCGACCGCGATCGTCGAGACCGTGATCGGGACCGCG
ACGGTGACCGTCACCGGGACCGTGATCGGGATAGTTATCGCTACCGTGAC
CGCGACCGTGAACGCGACCGCGATCGTGGTGACAGGTACGGAGGCCGGGG
CGACGACTACGGGCGGAAGCGATACCATGAAGATGATTCGTATGATGACC
CCCGTGCGAAGAGAAGATACTGAATTCGCATCGTGAAAGACACCGTAACG
CCAAAGGGCTCGAAGAAACCACACAGGGGATATGCTTTTATTGTCTATGA
GCGCGAAAAGGATATGAAAGATGAACCATCCAACGACCAACAAGCACGAG
GCGACCCGTTCAAGACGCTGTTTGTCGCTAGACTGAGCTACGATGTCAAG
GAATCGGACCTGGAACGGGAATTTGGTCGTTTCGGCCCTATTGAACGGAT
GACGGACAAGCTCCCCCCTCCGCTTCTGGCGCTCTTCCAACCTCGCCCGC
CTCTGCGTTATGTCACCCCCATCAACCGTGCCCCAGAAGACTGCAAGAAG
AGTAGCATCGGTGGTATTGCGCAGTTCCTTCCTGAGGTGAAGAAGTATGA
GGAAGAGATCCCATATACGCCTACGGAAAGCTGGATCCAGCGCAAACTGC
GCCAGAAAGTGGAGAAGAAAGAGAACATTAACAAGCAATTGACGGAAGGC
CTCGAGACCTCTGCCTACAAGGAAACGGATGGTATCCGCATCAAGGACCG
CCGTGTCTTGGTAGACGTCGAGCGCGGTCGTACAGTCAAGGGATGGAAGC
CTCGTCGCTTTGGTGGTGGTCTTGGAGGTCGTGGTTACACCAAGGCTTTG
CCGTCTCGACCTATCGGCCCTGGCTCTTTCAACGCCCCCTCTGGTCCCGG
CGGCTATGGTGGTGGATTCCGGGGTGGGTTCGGTGGCCGAGGTGGTTTCA
AGGGAGGATTCCGCGGTGACCGTGGATTTGGTGGGCCCCGCGGGGGTGTT
GGATACCAAGGTGGTCGCAACGGATTCGGTGGAGGCGGACAGGCTCCCCC
CAACGCCCCTTCAGGTCCGGGAGGCGGACGCAGCGGTGGGTTTGGTGGTC
CCCCTGGCGGCGGCAGATTTGAGCGTGAACCCCGGGGCGCCACTGGCAGC
AACAGAGAACCCATCAGGCCCCGGGACGGGTTTGGCGACCGCGATCGTCG
AGACCGTGATCGGGACCGCGACGGTGACCGTCACCGGGACCGTGATCGGG
ATAGTTATCGCTACCGTGACCGCGACCGTGAACGCGACCGCGATCGTGGT
GACAGGTACGGAGGCCGGGGCGACGACTACGGGCGGAAGCGATACCATGA
AGATGATTCGTATGATGACCCCCGTGCGAAGAGAAGATACTGAATTCGCA
TCGTGAAAGACACCGTAACGCCAAAGGGCTCGAAGAAACCACACAGGGGA
TATGCTTTTATTGTCTATGAGCGCGAAAAGGATATGAAAGATGAACCATC
CAACGACCAACAAGCACGAGGCGACCCGTTCAAGACGCTGTTTGTCGCTA
GACTGAGCTACGATGTCAAGGAATCGGACCTGGAACGGGAATTTGGTCGT
TTCGGCCCTATTGAACGGATGACGGACAAGCTCCCCCCTCCGCTTCTGGC
GCTCTTCCAACCTCGCCCGCCTCTGCGTTATGTCACCCCCATCAACCGTG
CCCCAGAAGACTGCAAGAAGAGTAGCATCGGTGGTATTGCGCAGTTCCTT
CCTGAGGTGAAGAAGTATGAGGAAGAGATCCCATATACGCCTACGGAAAG
CTGGATCCAGCGCAAACTGCGCCAGAAAGTGGAGAAGAAAGAGAACATTA
ACAAGCAATTGACGGAAGGCCTCGAGACCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0030619U1 snRNA binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_4110ATCC64974_4110Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_4110-T1ATCC64974_4110-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_4110-T1.cdsATCC64974_4110-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_4110-T1.exon4ATCC64974_4110-T1.exon4Aspergillus niger N402exon
ATCC64974_4110-T1.exon3ATCC64974_4110-T1.exon3Aspergillus niger N402exon
ATCC64974_4110-T1.exon2ATCC64974_4110-T1.exon2Aspergillus niger N402exon
ATCC64974_4110-T1.exon1ATCC64974_4110-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000011.5
NoteantiSMASH:Cluster_10000011.4
NoteBUSCO:EOG09264G1F
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034143
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR022023
DBxrefInterPro:IPR000504
DBxrefPFAM:PF12220
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:1254302..1255689 -
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