You are here

Home

ATCC64974_4150-T1, ATCC64974_4150-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_4150-T1
Unique NameATCC64974_4150-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:1261100..1261644+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_4150-T1 ID=ATCC64974_4150-T1|Name=ATCC64974_4150-T1|organism=Aspergillus niger N402|type=mRNA|length=545bp|location=Sequence derived from alignment at OGUI01000001.1:1261100..1261644+ (Aspergillus niger N402)
ATGTCATTCAAATCAAAGGATCTCGCATATGGTACGTTGCTTCATCTTCA
CTCCCCGTTGACATCGAAGTAACTAACCATCTTTCAGAGGCGAAGCAGCC
TGCTTTCTTACAGAGACTGAAGAATCAATACGGCGATACCTCTGGACGCC
TCGAAAGACCCATTGCGCGGCCACGGAAACCGAGGGATGACAATGACGAC
GATGCCCCTACCTACGTTGATGAAGAGAGCAACGAGATCATCTCCAAAGA
GGAATACGAAGCTTTAGTTCGTGGCGAAGATAACAAGGATACCGAGGATT
CCCATAAGGACACAAAAGAGCCTGCGACGGGTGAAGAAGGTAAAGCGAAT
ACCCAGGCCGAGGCACCTGTCTCCAAACAGAACGTGGCCGAAATAGGAGG
GCCACGGAAAAGGAAACAGGCCAAAGTAGTGGGAGAGGACAATCCCAGTG
AAGAGACAGAGAAGGTAGAGAAGAAAGAATCAGGCACTCGGAAACCAAAA
CAGAAGAAGAAGATCAAGCTATCCTTTGACGATGATGACTCATAA
back to top

Coding sequence (CDS) from alignment at OGUI01000001.1:1261100..1261644+

>ATCC64974_4150-T1 ID=ATCC64974_4150-T1|Name=ATCC64974_4150-T1|organism=Aspergillus niger N402|type=CDS|length=978bp|location=Sequence derived from alignment at OGUI01000001.1:1261100..1261644+ (Aspergillus niger N402)
ATGTCATTCAAATCAAAGGATCTCGCATATGAGGCGAAGCAGCCTGCTTT
CTTACAGAGACTGAAGAATCAATACGGCGATACCTCTGGACGCCTCGAAA
GACCCATTGCGCGGCCACGGAAACCGAGGGATGACAATGACGACGATGCC
CCTACCTACGTTGATGAAGAGAGCAACGAGATCATCTCCAAAGAGGAATA
CGAAGCTTTAGTTCGTGGCGAAGATAACAAGGATACCGAGGATTCCCATA
AGGACACAAAAGAGCCTGCGACGGGTGAAGAAGGTAAAGCGAATACCCAG
GCCGAGGCACCTGTCTCCAAACAGAACGTGGCCGAAATAGGAGGGCCACG
GAAAAGGAAACAGGCCAAAGTAGTGGGAGAGGACAATCCCAGTGAAGAGA
CAGAGAAGGTAGAGAAGAAAGAATCAGGCACTCGGAAACCAAAACAGAAG
AAGAAGATCAAGCTATCCTTTGACGATGATGACTCATAAATGTCATTCAA
ATCAAAGGATCTCGCATATGAGGCGAAGCAGCCTGCTTTCTTACAGAGAC
TGAAGAATCAATACGGCGATACCTCTGGACGCCTCGAAAGACCCATTGCG
CGGCCACGGAAACCGAGGGATGACAATGACGACGATGCCCCTACCTACGT
TGATGAAGAGAGCAACGAGATCATCTCCAAAGAGGAATACGAAGCTTTAG
TTCGTGGCGAAGATAACAAGGATACCGAGGATTCCCATAAGGACACAAAA
GAGCCTGCGACGGGTGAAGAAGGTAAAGCGAATACCCAGGCCGAGGCACC
TGTCTCCAAACAGAACGTGGCCGAAATAGGAGGGCCACGGAAAAGGAAAC
AGGCCAAAGTAGTGGGAGAGGACAATCCCAGTGAAGAGACAGAGAAGGTA
GAGAAGAAAGAATCAGGCACTCGGAAACCAAAACAGAAGAAGAAGATCAA
GCTATCCTTTGACGATGATGACTCATAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_4150ATCC64974_4150Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_4150-T1.exon1ATCC64974_4150-T1.exon1Aspergillus niger N402exon
ATCC64974_4150-T1.exon2ATCC64974_4150-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_4150-T1.cdsATCC64974_4150-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_4150-T1ATCC64974_4150-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027911
DBxrefPFAM:PF15377
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:1261100..1261644 +
Powered by Drupal