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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000006.1:826548..828749- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_41570-T1 ID=ATCC64974_41570-T1|Name=ATCC64974_41570-T1|organism=Aspergillus niger N402|type=mRNA|length=2202bp|location=Sequence derived from alignment at OGUI01000006.1:826548..828749- (Aspergillus niger N402)
ATGCCGGGCAACCGCCCAAGTAAACGGCGTTCGCCACTAACACAGAAACG
ACGGCCGAAACCTAGACGAAGAGCATGCGACTCCTGTTCCAAGAAAAAGG
TATGCCATGTGTTGTTGGATACGACTCAGACCCAGTCTGACACCATATTA
CCGGGCTTGGCAGATCCAATGCGATGGAGAGTTCCCGCAGTGCAACTGGT
GCAAGCATCATAATCTCGCCTGTACCTTCAATCGAATTCGGGCGAATTCC
GACACAGGGTACGCCATGACTGCATCTAATAATGCGGCCTGATTGCGAGT
TTCACCTTTTCTGCTCCGTTTCCCCTGAATAATGCTATTTCACTCAATAT
TTCAGGCGCCGTTCAACCTTATGCATCAGTCCAAGTGGTCGTAGCTAACT
TGTTGGTAGCAACCGAGTGATTGTCGCCACACCCGACACACCTAAGGCGG
TGATCCCCAACATTGCGGATGGGCCGCAAGACCTACTTGCCCGCCCGTCA
TCCCAGGTCGCTGACTCCACGAGGTCGTCGAGGATTGGAAATACGTTCCT
CAACAATGTCACCTACCTAAGGGGGCACCATGTATTTTCAAACGAAGGCC
AGAGGTGGATTGAATCTCAGGTTGGGGAAAGCGTCAACTTTGATAAGTTG
TTCTCTCTGGAGCTCCGTTGGCTGAAGCCACTTCGATCGTATACGGTCCC
TGGGGCGAACCCCCCTGCCGGTCCGCAGCTTCCAAGTAGAGTTAGCGTGG
AAAGATATGTGCAGATATACGGCTCATCATCCCAAAGTCTTGTCTTCCCG
GTCATCAGCCAGCCCGTCTTTGGCAAAACACTGGACCTTGCCTACAGTCA
TCTCCAGCTTCCTGGTTCTAACAGCGCTAAATCATGCGTCTATGCCTTCC
TCTCACTTATTTCCCTGTTTGGCATGGATGACAACATCCACGGTGCTATG
GACTGCCAGTCTTATGCATCAGTGGCACAGAGCTTTCAGATCCCGGTGAT
TGAGGAGATGACAGTCGACGGGTTGCAGACATTGATCATGCTGGTATGTA
CAAGGCCTTCCCCATGATCCATGTTTTAAATAGCCAACAAAGCCACCAGG
TACAAGTTCAATACTTTCTGGGAGATCTTCAGTCAGCAGCGGCGACATTG
TCTATTGCCACGCGTCTTCTGTACACACTGGAAGCCCATACCACCCCCAC
CAATAAGCCCTCTACCCCGTATGATAAAGGTGATTTGAGATGTCACCTAC
GTGATCTCTTCTGGCTCTGCTACTCCTTTGACAAAGACATATGTCTGAGA
ACGGGCCAGCCACCTTGTATAAACGATGCACATTGTGACCTTACCATGCC
TCCTGATTATGTGCGACTGCATGATCTCAATCTCCAACAGAGTTTGCCAC
AGGTCGACGAGCATCTGGTTCCACTTTTCCCATGGGATCTCCGTCTCTCA
ATGCTCAAATCAAAAGTGTACGAGGATCTTTGAACCGCTCATGCCCTCCA
GCAGTCCGTTACCGAGTTGCTCTCGAACATCCGCGGCCTTGATGAAGCAC
TTGAGCAGTGGAGGCTATCGCTCCCTGCGGAATTCCGACCTACTCTATAC
TTCTCTCAGGAGACACCAGTCAGTGCCAATTTGAACACCATGGCAGTGAT
CCTGCGGCTCGGCTACTACCATTGTCTGACTGTCATCCACCAAGCTAGCA
CCAGATGCCAGATTCTAGAGGCTGATCTCGCAGGATCAAGACTTGATGGC
ATCGCTTCCAGTACAAAACTTACCATCACTGCCAGTCGCTCGACGTTGTT
ATATCTCCACAAGGTACTCCCTGTGGTAAACCCGGAGTGCTTTTGGTATG
GGTTCTTCAATCAGCGGTAATTCTAGCATTACTAATGGTTGTGTCTTGTA
TCAGGGTCGTCCTCTTTTATGCTATTACAGCAGTCTTGACCCTTTTTTGC
AACATCATCTCGAACCCTCGCGATTCCGACACAAACCACAACATGGACTT
GCTGCAGAACGTTCCCAGTTTGATCAGGAGTATTCCTATCCGAAAGTTAA
CTGCCGGCGAAGTCCTTCACCTGCAGTACCTGGATGTCTTTACCGCGGAA
CTCAGCAGCATTTGCGTACGTGCCATATCCAAGTCACAACAGAACAATTA
CAGCCTTAATTTGCAGCATGGTGGCACTACATCCATATATCCCATGCAGT
AA back to topCoding sequence (CDS) from alignment at OGUI01000006.1:826548..828749- >ATCC64974_41570-T1 ID=ATCC64974_41570-T1|Name=ATCC64974_41570-T1|organism=Aspergillus niger N402|type=CDS|length=7335bp|location=Sequence derived from alignment at OGUI01000006.1:826548..828749- (Aspergillus niger N402)
GGTCGTCCTCTTTTATGCTATTACAGCAGTCTTGACCCTTTTTTGCAACA
TCATCTCGAACCCTCGCGATTCCGACACAAACCACAACATGGACTTGCTG
CAGAACGTTCCCAGTTTGATCAGGAGTATTCCTATCCGAAAGTTAACTGC
CGGCGAAGTCCTTCACCTGCAGTACCTGGATGTCTTTACCGCGGAACTCA
GCAGCATTTGCGTACGTGCCATATCCAAGTCACAACAGAACAATTACAGC
CTTAATTTGCAGCATGGTGGCACTACATCCATATATCCCATGCAGTAATC
CGTTACCGAGTTGCTCTCGAACATCCGCGGCCTTGATGAAGCACTTGAGC
AGTGGAGGCTATCGCTCCCTGCGGAATTCCGACCTACTCTATACTTCTCT
CAGGAGACACCAGTCAGTGCCAATTTGAACACCATGGCAGTGATCCTGCG
GCTCGGCTACTACCATTGTCTGACTGTCATCCACCAAGCTAGCACCAGAT
GCCAGATTCTAGAGGCTGATCTCGCAGGATCAAGACTTGATGGCATCGCT
TCCAGTACAAAACTTACCATCACTGCCAGTCGCTCGACGTTGTTATATCT
CCACAAGGTACTCCCTGTGGTAAACCCGGAGTGCTTTTGCAACCGAGTGA
TTGTCGCCACACCCGACACACCTAAGGCGGTGATCCCCAACATTGCGGAT
GGGCCGCAAGACCTACTTGCCCGCCCGTCATCCCAGGTCGCTGACTCCAC
GAGGTCGTCGAGGATTGGAAATACGTTCCTCAACAATGTCACCTACCTAA
GGGGGCACCATGTATTTTCAAACGAAGGCCAGAGGTGGATTGAATCTCAG
GTTGGGGAAAGCGTCAACTTTGATAAGTTGTTCTCTCTGGAGCTCCGTTG
GCTGAAGCCACTTCGATCGTATACGGTCCCTGGGGCGAACCCCCCTGCCG
GTCCGCAGCTTCCAAGTAGAGTTAGCGTGGAAAGATATGTGCAGATATAC
GGCTCATCATCCCAAAGTCTTGTCTTCCCGGTCATCAGCCAGCCCGTCTT
TGGCAAAACACTGGACCTTGCCTACAGTCATCTCCAGCTTCCTGGTTCTA
ACAGCGCTAAATCATGCGTCTATGCCTTCCTCTCACTTATTTCCCTGTTT
GGCATGGATGACAACATCCACGGTGCTATGGACTGCCAGTCTTATGCATC
AGTGGCACAGAGCTTTCAGATCCCGGTGATTGAGGAGATGACAGTCGACG
GGTTGCAGACATTGATCATGCTGATCCAATGCGATGGAGAGTTCCCGCAG
TGCAACTGGTGCAAGCATCATAATCTCGCCTGTACCTTCAATCGAATTCG
GGCGAATTCCGACACAGGATGCCGGGCAACCGCCCAAGTAAACGGCGTTC
GCCACTAACACAGAAACGACGGCCGAAACCTAGACGAAGAGCATGCGACT
CCTGTTCCAAGAAAAAGGGTCGTCCTCTTTTATGCTATTACAGCAGTCTT
GACCCTTTTTTGCAACATCATCTCGAACCCTCGCGATTCCGACACAAACC
ACAACATGGACTTGCTGCAGAACGTTCCCAGTTTGATCAGGAGTATTCCT
ATCCGAAAGTTAACTGCCGGCGAAGTCCTTCACCTGCAGTACCTGGATGT
CTTTACCGCGGAACTCAGCAGCATTTGCGTACGTGCCATATCCAAGTCAC
AACAGAACAATTACAGCCTTAATTTGCAGCATGGTGGCACTACATCCATA
TATCCCATGCAGTAATCCGTTACCGAGTTGCTCTCGAACATCCGCGGCCT
TGATGAAGCACTTGAGCAGTGGAGGCTATCGCTCCCTGCGGAATTCCGAC
CTACTCTATACTTCTCTCAGGAGACACCAGTCAGTGCCAATTTGAACACC
ATGGCAGTGATCCTGCGGCTCGGCTACTACCATTGTCTGACTGTCATCCA
CCAAGCTAGCACCAGATGCCAGATTCTAGAGGCTGATCTCGCAGGATCAA
GACTTGATGGCATCGCTTCCAGTACAAAACTTACCATCACTGCCAGTCGC
TCGACGTTGTTATATCTCCACAAGGTACTCCCTGTGGTAAACCCGGAGTG
CTTTTGCAACCGAGTGATTGTCGCCACACCCGACACACCTAAGGCGGTGA
TCCCCAACATTGCGGATGGGCCGCAAGACCTACTTGCCCGCCCGTCATCC
CAGGTCGCTGACTCCACGAGGTCGTCGAGGATTGGAAATACGTTCCTCAA
CAATGTCACCTACCTAAGGGGGCACCATGTATTTTCAAACGAAGGCCAGA
GGTGGATTGAATCTCAGGTTGGGGAAAGCGTCAACTTTGATAAGTTGTTC
TCTCTGGAGCTCCGTTGGCTGAAGCCACTTCGATCGTATACGGTCCCTGG
GGCGAACCCCCCTGCCGGTCCGCAGCTTCCAAGTAGAGTTAGCGTGGAAA
GATATGTGCAGATATACGGCTCATCATCCCAAAGTCTTGTCTTCCCGGTC
ATCAGCCAGCCCGTCTTTGGCAAAACACTGGACCTTGCCTACAGTCATCT
CCAGCTTCCTGGTTCTAACAGCGCTAAATCATGCGTCTATGCCTTCCTCT
CACTTATTTCCCTGTTTGGCATGGATGACAACATCCACGGTGCTATGGAC
TGCCAGTCTTATGCATCAGTGGCACAGAGCTTTCAGATCCCGGTGATTGA
GGAGATGACAGTCGACGGGTTGCAGACATTGATCATGCTGATCCAATGCG
ATGGAGAGTTCCCGCAGTGCAACTGGTGCAAGCATCATAATCTCGCCTGT
ACCTTCAATCGAATTCGGGCGAATTCCGACACAGGATGCCGGGCAACCGC
CCAAGTAAACGGCGTTCGCCACTAACACAGAAACGACGGCCGAAACCTAG
ACGAAGAGCATGCGACTCCTGTTCCAAGAAAAAGGGTCGTCCTCTTTTAT
GCTATTACAGCAGTCTTGACCCTTTTTTGCAACATCATCTCGAACCCTCG
CGATTCCGACACAAACCACAACATGGACTTGCTGCAGAACGTTCCCAGTT
TGATCAGGAGTATTCCTATCCGAAAGTTAACTGCCGGCGAAGTCCTTCAC
CTGCAGTACCTGGATGTCTTTACCGCGGAACTCAGCAGCATTTGCGTACG
TGCCATATCCAAGTCACAACAGAACAATTACAGCCTTAATTTGCAGCATG
GTGGCACTACATCCATATATCCCATGCAGTAATCCGTTACCGAGTTGCTC
TCGAACATCCGCGGCCTTGATGAAGCACTTGAGCAGTGGAGGCTATCGCT
CCCTGCGGAATTCCGACCTACTCTATACTTCTCTCAGGAGACACCAGTCA
GTGCCAATTTGAACACCATGGCAGTGATCCTGCGGCTCGGCTACTACCAT
TGTCTGACTGTCATCCACCAAGCTAGCACCAGATGCCAGATTCTAGAGGC
TGATCTCGCAGGATCAAGACTTGATGGCATCGCTTCCAGTACAAAACTTA
CCATCACTGCCAGTCGCTCGACGTTGTTATATCTCCACAAGGTACTCCCT
GTGGTAAACCCGGAGTGCTTTTGCAACCGAGTGATTGTCGCCACACCCGA
CACACCTAAGGCGGTGATCCCCAACATTGCGGATGGGCCGCAAGACCTAC
TTGCCCGCCCGTCATCCCAGGTCGCTGACTCCACGAGGTCGTCGAGGATT
GGAAATACGTTCCTCAACAATGTCACCTACCTAAGGGGGCACCATGTATT
TTCAAACGAAGGCCAGAGGTGGATTGAATCTCAGGTTGGGGAAAGCGTCA
ACTTTGATAAGTTGTTCTCTCTGGAGCTCCGTTGGCTGAAGCCACTTCGA
TCGTATACGGTCCCTGGGGCGAACCCCCCTGCCGGTCCGCAGCTTCCAAG
TAGAGTTAGCGTGGAAAGATATGTGCAGATATACGGCTCATCATCCCAAA
GTCTTGTCTTCCCGGTCATCAGCCAGCCCGTCTTTGGCAAAACACTGGAC
CTTGCCTACAGTCATCTCCAGCTTCCTGGTTCTAACAGCGCTAAATCATG
CGTCTATGCCTTCCTCTCACTTATTTCCCTGTTTGGCATGGATGACAACA
TCCACGGTGCTATGGACTGCCAGTCTTATGCATCAGTGGCACAGAGCTTT
CAGATCCCGGTGATTGAGGAGATGACAGTCGACGGGTTGCAGACATTGAT
CATGCTGATCCAATGCGATGGAGAGTTCCCGCAGTGCAACTGGTGCAAGC
ATCATAATCTCGCCTGTACCTTCAATCGAATTCGGGCGAATTCCGACACA
GGATGCCGGGCAACCGCCCAAGTAAACGGCGTTCGCCACTAACACAGAAA
CGACGGCCGAAACCTAGACGAAGAGCATGCGACTCCTGTTCCAAGAAAAA
GGGTCGTCCTCTTTTATGCTATTACAGCAGTCTTGACCCTTTTTTGCAAC
ATCATCTCGAACCCTCGCGATTCCGACACAAACCACAACATGGACTTGCT
GCAGAACGTTCCCAGTTTGATCAGGAGTATTCCTATCCGAAAGTTAACTG
CCGGCGAAGTCCTTCACCTGCAGTACCTGGATGTCTTTACCGCGGAACTC
AGCAGCATTTGCGTACGTGCCATATCCAAGTCACAACAGAACAATTACAG
CCTTAATTTGCAGCATGGTGGCACTACATCCATATATCCCATGCAGTAAT
CCGTTACCGAGTTGCTCTCGAACATCCGCGGCCTTGATGAAGCACTTGAG
CAGTGGAGGCTATCGCTCCCTGCGGAATTCCGACCTACTCTATACTTCTC
TCAGGAGACACCAGTCAGTGCCAATTTGAACACCATGGCAGTGATCCTGC
GGCTCGGCTACTACCATTGTCTGACTGTCATCCACCAAGCTAGCACCAGA
TGCCAGATTCTAGAGGCTGATCTCGCAGGATCAAGACTTGATGGCATCGC
TTCCAGTACAAAACTTACCATCACTGCCAGTCGCTCGACGTTGTTATATC
TCCACAAGGTACTCCCTGTGGTAAACCCGGAGTGCTTTTGCAACCGAGTG
ATTGTCGCCACACCCGACACACCTAAGGCGGTGATCCCCAACATTGCGGA
TGGGCCGCAAGACCTACTTGCCCGCCCGTCATCCCAGGTCGCTGACTCCA
CGAGGTCGTCGAGGATTGGAAATACGTTCCTCAACAATGTCACCTACCTA
AGGGGGCACCATGTATTTTCAAACGAAGGCCAGAGGTGGATTGAATCTCA
GGTTGGGGAAAGCGTCAACTTTGATAAGTTGTTCTCTCTGGAGCTCCGTT
GGCTGAAGCCACTTCGATCGTATACGGTCCCTGGGGCGAACCCCCCTGCC
GGTCCGCAGCTTCCAAGTAGAGTTAGCGTGGAAAGATATGTGCAGATATA
CGGCTCATCATCCCAAAGTCTTGTCTTCCCGGTCATCAGCCAGCCCGTCT
TTGGCAAAACACTGGACCTTGCCTACAGTCATCTCCAGCTTCCTGGTTCT
AACAGCGCTAAATCATGCGTCTATGCCTTCCTCTCACTTATTTCCCTGTT
TGGCATGGATGACAACATCCACGGTGCTATGGACTGCCAGTCTTATGCAT
CAGTGGCACAGAGCTTTCAGATCCCGGTGATTGAGGAGATGACAGTCGAC
GGGTTGCAGACATTGATCATGCTGATCCAATGCGATGGAGAGTTCCCGCA
GTGCAACTGGTGCAAGCATCATAATCTCGCCTGTACCTTCAATCGAATTC
GGGCGAATTCCGACACAGGATGCCGGGCAACCGCCCAAGTAAACGGCGTT
CGCCACTAACACAGAAACGACGGCCGAAACCTAGACGAAGAGCATGCGAC
TCCTGTTCCAAGAAAAAGGGTCGTCCTCTTTTATGCTATTACAGCAGTCT
TGACCCTTTTTTGCAACATCATCTCGAACCCTCGCGATTCCGACACAAAC
CACAACATGGACTTGCTGCAGAACGTTCCCAGTTTGATCAGGAGTATTCC
TATCCGAAAGTTAACTGCCGGCGAAGTCCTTCACCTGCAGTACCTGGATG
TCTTTACCGCGGAACTCAGCAGCATTTGCGTACGTGCCATATCCAAGTCA
CAACAGAACAATTACAGCCTTAATTTGCAGCATGGTGGCACTACATCCAT
ATATCCCATGCAGTAATCCGTTACCGAGTTGCTCTCGAACATCCGCGGCC
TTGATGAAGCACTTGAGCAGTGGAGGCTATCGCTCCCTGCGGAATTCCGA
CCTACTCTATACTTCTCTCAGGAGACACCAGTCAGTGCCAATTTGAACAC
CATGGCAGTGATCCTGCGGCTCGGCTACTACCATTGTCTGACTGTCATCC
ACCAAGCTAGCACCAGATGCCAGATTCTAGAGGCTGATCTCGCAGGATCA
AGACTTGATGGCATCGCTTCCAGTACAAAACTTACCATCACTGCCAGTCG
CTCGACGTTGTTATATCTCCACAAGGTACTCCCTGTGGTAAACCCGGAGT
GCTTTTGCAACCGAGTGATTGTCGCCACACCCGACACACCTAAGGCGGTG
ATCCCCAACATTGCGGATGGGCCGCAAGACCTACTTGCCCGCCCGTCATC
CCAGGTCGCTGACTCCACGAGGTCGTCGAGGATTGGAAATACGTTCCTCA
ACAATGTCACCTACCTAAGGGGGCACCATGTATTTTCAAACGAAGGCCAG
AGGTGGATTGAATCTCAGGTTGGGGAAAGCGTCAACTTTGATAAGTTGTT
CTCTCTGGAGCTCCGTTGGCTGAAGCCACTTCGATCGTATACGGTCCCTG
GGGCGAACCCCCCTGCCGGTCCGCAGCTTCCAAGTAGAGTTAGCGTGGAA
AGATATGTGCAGATATACGGCTCATCATCCCAAAGTCTTGTCTTCCCGGT
CATCAGCCAGCCCGTCTTTGGCAAAACACTGGACCTTGCCTACAGTCATC
TCCAGCTTCCTGGTTCTAACAGCGCTAAATCATGCGTCTATGCCTTCCTC
TCACTTATTTCCCTGTTTGGCATGGATGACAACATCCACGGTGCTATGGA
CTGCCAGTCTTATGCATCAGTGGCACAGAGCTTTCAGATCCCGGTGATTG
AGGAGATGACAGTCGACGGGTTGCAGACATTGATCATGCTGATCCAATGC
GATGGAGAGTTCCCGCAGTGCAACTGGTGCAAGCATCATAATCTCGCCTG
TACCTTCAATCGAATTCGGGCGAATTCCGACACAGGATGCCGGGCAACCG
CCCAAGTAAACGGCGTTCGCCACTAACACAGAAACGACGGCCGAAACCTA
GACGAAGAGCATGCGACTCCTGTTCCAAGAAAAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_41570-T1 | ATCC64974_41570-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000006.1 | supercontig | OGUI01000006.1:826548..828749 - |
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