You are here

Home

ATCC64974_41610-T1, ATCC64974_41610-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_41610-T1
Unique NameATCC64974_41610-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000006.1:833577..835829+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_41610-T1 ID=ATCC64974_41610-T1|Name=ATCC64974_41610-T1|organism=Aspergillus niger N402|type=mRNA|length=2253bp|location=Sequence derived from alignment at OGUI01000006.1:833577..835829+ (Aspergillus niger N402)
ATGGAGCATATTAAGCAGTCCTTCGCGAAAGCGAAGCATCAGAACCGTGC
TGCTCTGGGGGCCTATGTTACCGCTGGGTATCCGACAGTCAAAGAGACGC
CAGATATCCTACTCAGTCTCGAAAGCAGCGGTGCAGGTGAGTCGCCTTTG
AATATATCTTGACGAATCACGTGTGCATGACATCTAACGCACTACGACTG
AATAGACATGATTGAGCTGGGCATGCCGTTTTCTGACCCCATTGCGGACG
GCCCGATTATCCAAGAGGCCAATATGATCGCTCTCGCCAATGGTGTCACC
ATCACAGGGGTATTGGACATGGTGCGAGAAGCAAGACGACGGGGACTAAA
GATACCCGTTCTGCTCATGGGGTACTATAATCCAGTCATCCGCTATGGTG
AGGAGAAGTTGTTGCATGACTGCAAGCAGGCAGGCGTACATGGGTTCGTC
CTGGTGGACCTCCCCATTGAGGAAGCCGTTCGGTTCAGAAGACTCTCTGC
CACGCATGGGTACGTACATGATCGTCTGTCTTTCTAGTTATGAGCTAAAG
AACGCCAGGCTTTCTTATATCCCCCTCATTGCTCCCTCTACGTCTATACC
TCGCATGAAAGCCTTGTGCAGCATAGCCGACTCATTTATCTTGCTGTGTC
GAGAATGGGTGTGACTGGTGCCTCCCAGTCACTAAGCGCCAACCTTCCTG
AGTTTCTTGACCGCATCCACACCTATGCCGGCGACACACCGATTGCTCTC
GGCTTTGGCATCAGTACACGAGAACACTTTCTATCCGTACAAGCCTTGAC
TGAAGGCTGTATCATTGGCAGTCAGATCATCAGTACCATCGGCGCTGCGC
TACCCGGTCGCGCTGCTGAATACGTCGGGAAGTACCTGTCTGGTATCACC
GGGCGCAAGCTCGAGCGAGATGAGCACGGTGCGATTGTCCGTGAGGTCAC
TGTGTTAGAACCCCCTGTGACTAGGGTGAGGCCTCAAGCGATGACTTCAG
AGGGTTCACGTTCGGAAACCACCGACCTCACAGCCGAGCAGGATCCCGTG
CCATCCACGCGATTCGGCGAATTTGGTGGCCAATACGTGTCCGAATCGTT
GATGGGCTGTTTATCTGAATTAGACCGGGCCTTTGAAGGGGTACGACAAG
ACCCGGCCTTCTGGGAAGAGTACCGCTCCTATTATCCTTATATGGGTCGG
CCGAGTGGATTGTACTTTGCTCAACACCTTACTGAAAAGATTGGTGGTGC
AAATATCTGGATCAAACGGGAAGATCTCAATCACACTGGCAGCCACAAGA
TCAATAATGCCCTGGGCCAGATCCTACTAGCTCGACGACTGGGAAAGTCA
CGCATTATCGCCGAAACGGGCGCGGGCCAGCATGGCGTGGCCACTGCGAC
GGTCTGCGCCAAATTCGGAATGGAATGTGTTGTCTACATGGGCGCTGAGG
ATGTTCGTCGTCAAGCGCTGAATGTGTTCCGGATGAAGCTTCTCGGTGCT
AAAGTAGTACCAGTGACATCTGGTAGTCGCACCCTGCGTGATGCAGTGAA
TGAAGCATTGCGTGCGTGGGTCAAAGATGTTGAGACCACTCATTATATTC
TCGGTTCGGTTGTTGGCCCTCACCCGTTCCCTACTATCGTGCGCACCTTC
CAGTCCATCATTGGGCAGGAAACGAAAGAACAGATGCGAAAGGCTATCGG
AAAACTCCCTGACGCTGTTGTGGCCTGTGTCGGGGGAGGCAGCAATGCAT
CAGGAATGTTCTATCCTTTCATAGACGAGCCAAGTGTCCAGATGCTGGGT
GTGGAAGCCGGTGGCGATGGCCTCGATACCTCACGCCATTCAGCAACCCT
GTCCGGTGGCAGTAAGGGAGTCCTTCATGGAGTATACACCTATCTCTTAC
AGGACGAACATGGGCAGATCTCGGAGACACACTCTGTCTCGGCTGGTATG
GACTACCCAGCGGTAGGGCCCGAACTCAGCTCCTGGAAGGACAGTGGAAG
GGCCCGATTCATTGCAGCCACCGATTCCCAGGCCCTGGCTGGCTTCCGCG
CTCTAGCAATGTACGAAGGCATCATTCCCGCGCTAGAGTCCTCTCACGCT
GTCTACGGTGCTATTGAACTCGCCAAGACAATGAAGAAGGGCGAACAGGA
TATTGTTCTCAACCTTAGCGGACGAGGTGACAAGGATGTCAATACTGTCG
CTGAGGTCCTGCCTCGTCTGGGACCTGAGATCGGGTGGGATTTGTGGTTT
TGA
back to top

Coding sequence (CDS) from alignment at OGUI01000006.1:833577..835829+

>ATCC64974_41610-T1 ID=ATCC64974_41610-T1|Name=ATCC64974_41610-T1|organism=Aspergillus niger N402|type=CDS|length=6201bp|location=Sequence derived from alignment at OGUI01000006.1:833577..835829+ (Aspergillus niger N402)
ATGGAGCATATTAAGCAGTCCTTCGCGAAAGCGAAGCATCAGAACCGTGC
TGCTCTGGGGGCCTATGTTACCGCTGGGTATCCGACAGTCAAAGAGACGC
CAGATATCCTACTCAGTCTCGAAAGCAGCGGTGCAGACATGATTGAGCTG
GGCATGCCGTTTTCTGACCCCATTGCGGACGGCCCGATTATCCAAGAGGC
CAATATGATCGCTCTCGCCAATGGTGTCACCATCACAGGGGTATTGGACA
TGGTGCGAGAAGCAAGACGACGGGGACTAAAGATACCCGTTCTGCTCATG
GGGTACTATAATCCAGTCATCCGCTATGGTGAGGAGAAGTTGTTGCATGA
CTGCAAGCAGGCAGGCGTACATGGGTTCGTCCTGGTGGACCTCCCCATTG
AGGAAGCCGTTCGGTTCAGAAGACTCTCTGCCACGCATGGCCGACTCATT
TATCTTGCTGTGTCGAGAATGGGTGTGACTGGTGCCTCCCAGTCACTAAG
CGCCAACCTTCCTGAGTTTCTTGACCGCATCCACACCTATGCCGGCGACA
CACCGATTGCTCTCGGCTTTGGCATCAGTACACGAGAACACTTTCTATCC
GTACAAGCCTTGACTGAAGGCTGTATCATTGGCAGTCAGATCATCAGTAC
CATCGGCGCTGCGCTACCCGGTCGCGCTGCTGAATACGTCGGGAAGTACC
TGTCTGGTATCACCGGGCGCAAGCTCGAGCGAGATGAGCACGGTGCGATT
GTCCGTGAGGTCACTGTGTTAGAACCCCCTGTGACTAGGGTGAGGCCTCA
AGCGATGACTTCAGAGGGTTCACGTTCGGAAACCACCGACCTCACAGCCG
AGCAGGATCCCGTGCCATCCACGCGATTCGGCGAATTTGGTGGCCAATAC
GTGTCCGAATCGTTGATGGGCTGTTTATCTGAATTAGACCGGGCCTTTGA
AGGGGTACGACAAGACCCGGCCTTCTGGGAAGAGTACCGCTCCTATTATC
CTTATATGGGTCGGCCGAGTGGATTGTACTTTGCTCAACACCTTACTGAA
AAGATTGGTGGTGCAAATATCTGGATCAAACGGGAAGATCTCAATCACAC
TGGCAGCCACAAGATCAATAATGCCCTGGGCCAGATCCTACTAGCTCGAC
GACTGGGAAAGTCACGCATTATCGCCGAAACGGGCGCGGGCCAGCATGGC
GTGGCCACTGCGACGGTCTGCGCCAAATTCGGAATGGAATGTGTTGTCTA
CATGGGCGCTGAGGATGTTCGTCGTCAAGCGCTGAATGTGTTCCGGATGA
AGCTTCTCGGTGCTAAAGTAGTACCAGTGACATCTGGTAGTCGCACCCTG
CGTGATGCAGTGAATGAAGCATTGCGTGCGTGGGTCAAAGATGTTGAGAC
CACTCATTATATTCTCGGTTCGGTTGTTGGCCCTCACCCGTTCCCTACTA
TCGTGCGCACCTTCCAGTCCATCATTGGGCAGGAAACGAAAGAACAGATG
CGAAAGGCTATCGGAAAACTCCCTGACGCTGTTGTGGCCTGTGTCGGGGG
AGGCAGCAATGCATCAGGAATGTTCTATCCTTTCATAGACGAGCCAAGTG
TCCAGATGCTGGGTGTGGAAGCCGGTGGCGATGGCCTCGATACCTCACGC
CATTCAGCAACCCTGTCCGGTGGCAGTAAGGGAGTCCTTCATGGAGTATA
CACCTATCTCTTACAGGACGAACATGGGCAGATCTCGGAGACACACTCTG
TCTCGGCTGGTATGGACTACCCAGCGGTAGGGCCCGAACTCAGCTCCTGG
AAGGACAGTGGAAGGGCCCGATTCATTGCAGCCACCGATTCCCAGGCCCT
GGCTGGCTTCCGCGCTCTAGCAATGTACGAAGGCATCATTCCCGCGCTAG
AGTCCTCTCACGCTGTCTACGGTGCTATTGAACTCGCCAAGACAATGAAG
AAGGGCGAACAGGATATTGTTCTCAACCTTAGCGGACGAGGTGACAAGGA
TGTCAATACTGTCGCTGAGGTCCTGCCTCGTCTGGGACCTGAGATCGGGT
GGGATTTGTGGTTTTGAATGGAGCATATTAAGCAGTCCTTCGCGAAAGCG
AAGCATCAGAACCGTGCTGCTCTGGGGGCCTATGTTACCGCTGGGTATCC
GACAGTCAAAGAGACGCCAGATATCCTACTCAGTCTCGAAAGCAGCGGTG
CAGACATGATTGAGCTGGGCATGCCGTTTTCTGACCCCATTGCGGACGGC
CCGATTATCCAAGAGGCCAATATGATCGCTCTCGCCAATGGTGTCACCAT
CACAGGGGTATTGGACATGGTGCGAGAAGCAAGACGACGGGGACTAAAGA
TACCCGTTCTGCTCATGGGGTACTATAATCCAGTCATCCGCTATGGTGAG
GAGAAGTTGTTGCATGACTGCAAGCAGGCAGGCGTACATGGGTTCGTCCT
GGTGGACCTCCCCATTGAGGAAGCCGTTCGGTTCAGAAGACTCTCTGCCA
CGCATGGCCGACTCATTTATCTTGCTGTGTCGAGAATGGGTGTGACTGGT
GCCTCCCAGTCACTAAGCGCCAACCTTCCTGAGTTTCTTGACCGCATCCA
CACCTATGCCGGCGACACACCGATTGCTCTCGGCTTTGGCATCAGTACAC
GAGAACACTTTCTATCCGTACAAGCCTTGACTGAAGGCTGTATCATTGGC
AGTCAGATCATCAGTACCATCGGCGCTGCGCTACCCGGTCGCGCTGCTGA
ATACGTCGGGAAGTACCTGTCTGGTATCACCGGGCGCAAGCTCGAGCGAG
ATGAGCACGGTGCGATTGTCCGTGAGGTCACTGTGTTAGAACCCCCTGTG
ACTAGGGTGAGGCCTCAAGCGATGACTTCAGAGGGTTCACGTTCGGAAAC
CACCGACCTCACAGCCGAGCAGGATCCCGTGCCATCCACGCGATTCGGCG
AATTTGGTGGCCAATACGTGTCCGAATCGTTGATGGGCTGTTTATCTGAA
TTAGACCGGGCCTTTGAAGGGGTACGACAAGACCCGGCCTTCTGGGAAGA
GTACCGCTCCTATTATCCTTATATGGGTCGGCCGAGTGGATTGTACTTTG
CTCAACACCTTACTGAAAAGATTGGTGGTGCAAATATCTGGATCAAACGG
GAAGATCTCAATCACACTGGCAGCCACAAGATCAATAATGCCCTGGGCCA
GATCCTACTAGCTCGACGACTGGGAAAGTCACGCATTATCGCCGAAACGG
GCGCGGGCCAGCATGGCGTGGCCACTGCGACGGTCTGCGCCAAATTCGGA
ATGGAATGTGTTGTCTACATGGGCGCTGAGGATGTTCGTCGTCAAGCGCT
GAATGTGTTCCGGATGAAGCTTCTCGGTGCTAAAGTAGTACCAGTGACAT
CTGGTAGTCGCACCCTGCGTGATGCAGTGAATGAAGCATTGCGTGCGTGG
GTCAAAGATGTTGAGACCACTCATTATATTCTCGGTTCGGTTGTTGGCCC
TCACCCGTTCCCTACTATCGTGCGCACCTTCCAGTCCATCATTGGGCAGG
AAACGAAAGAACAGATGCGAAAGGCTATCGGAAAACTCCCTGACGCTGTT
GTGGCCTGTGTCGGGGGAGGCAGCAATGCATCAGGAATGTTCTATCCTTT
CATAGACGAGCCAAGTGTCCAGATGCTGGGTGTGGAAGCCGGTGGCGATG
GCCTCGATACCTCACGCCATTCAGCAACCCTGTCCGGTGGCAGTAAGGGA
GTCCTTCATGGAGTATACACCTATCTCTTACAGGACGAACATGGGCAGAT
CTCGGAGACACACTCTGTCTCGGCTGGTATGGACTACCCAGCGGTAGGGC
CCGAACTCAGCTCCTGGAAGGACAGTGGAAGGGCCCGATTCATTGCAGCC
ACCGATTCCCAGGCCCTGGCTGGCTTCCGCGCTCTAGCAATGTACGAAGG
CATCATTCCCGCGCTAGAGTCCTCTCACGCTGTCTACGGTGCTATTGAAC
TCGCCAAGACAATGAAGAAGGGCGAACAGGATATTGTTCTCAACCTTAGC
GGACGAGGTGACAAGGATGTCAATACTGTCGCTGAGGTCCTGCCTCGTCT
GGGACCTGAGATCGGGTGGGATTTGTGGTTTTGAATGGAGCATATTAAGC
AGTCCTTCGCGAAAGCGAAGCATCAGAACCGTGCTGCTCTGGGGGCCTAT
GTTACCGCTGGGTATCCGACAGTCAAAGAGACGCCAGATATCCTACTCAG
TCTCGAAAGCAGCGGTGCAGACATGATTGAGCTGGGCATGCCGTTTTCTG
ACCCCATTGCGGACGGCCCGATTATCCAAGAGGCCAATATGATCGCTCTC
GCCAATGGTGTCACCATCACAGGGGTATTGGACATGGTGCGAGAAGCAAG
ACGACGGGGACTAAAGATACCCGTTCTGCTCATGGGGTACTATAATCCAG
TCATCCGCTATGGTGAGGAGAAGTTGTTGCATGACTGCAAGCAGGCAGGC
GTACATGGGTTCGTCCTGGTGGACCTCCCCATTGAGGAAGCCGTTCGGTT
CAGAAGACTCTCTGCCACGCATGGCCGACTCATTTATCTTGCTGTGTCGA
GAATGGGTGTGACTGGTGCCTCCCAGTCACTAAGCGCCAACCTTCCTGAG
TTTCTTGACCGCATCCACACCTATGCCGGCGACACACCGATTGCTCTCGG
CTTTGGCATCAGTACACGAGAACACTTTCTATCCGTACAAGCCTTGACTG
AAGGCTGTATCATTGGCAGTCAGATCATCAGTACCATCGGCGCTGCGCTA
CCCGGTCGCGCTGCTGAATACGTCGGGAAGTACCTGTCTGGTATCACCGG
GCGCAAGCTCGAGCGAGATGAGCACGGTGCGATTGTCCGTGAGGTCACTG
TGTTAGAACCCCCTGTGACTAGGGTGAGGCCTCAAGCGATGACTTCAGAG
GGTTCACGTTCGGAAACCACCGACCTCACAGCCGAGCAGGATCCCGTGCC
ATCCACGCGATTCGGCGAATTTGGTGGCCAATACGTGTCCGAATCGTTGA
TGGGCTGTTTATCTGAATTAGACCGGGCCTTTGAAGGGGTACGACAAGAC
CCGGCCTTCTGGGAAGAGTACCGCTCCTATTATCCTTATATGGGTCGGCC
GAGTGGATTGTACTTTGCTCAACACCTTACTGAAAAGATTGGTGGTGCAA
ATATCTGGATCAAACGGGAAGATCTCAATCACACTGGCAGCCACAAGATC
AATAATGCCCTGGGCCAGATCCTACTAGCTCGACGACTGGGAAAGTCACG
CATTATCGCCGAAACGGGCGCGGGCCAGCATGGCGTGGCCACTGCGACGG
TCTGCGCCAAATTCGGAATGGAATGTGTTGTCTACATGGGCGCTGAGGAT
GTTCGTCGTCAAGCGCTGAATGTGTTCCGGATGAAGCTTCTCGGTGCTAA
AGTAGTACCAGTGACATCTGGTAGTCGCACCCTGCGTGATGCAGTGAATG
AAGCATTGCGTGCGTGGGTCAAAGATGTTGAGACCACTCATTATATTCTC
GGTTCGGTTGTTGGCCCTCACCCGTTCCCTACTATCGTGCGCACCTTCCA
GTCCATCATTGGGCAGGAAACGAAAGAACAGATGCGAAAGGCTATCGGAA
AACTCCCTGACGCTGTTGTGGCCTGTGTCGGGGGAGGCAGCAATGCATCA
GGAATGTTCTATCCTTTCATAGACGAGCCAAGTGTCCAGATGCTGGGTGT
GGAAGCCGGTGGCGATGGCCTCGATACCTCACGCCATTCAGCAACCCTGT
CCGGTGGCAGTAAGGGAGTCCTTCATGGAGTATACACCTATCTCTTACAG
GACGAACATGGGCAGATCTCGGAGACACACTCTGTCTCGGCTGGTATGGA
CTACCCAGCGGTAGGGCCCGAACTCAGCTCCTGGAAGGACAGTGGAAGGG
CCCGATTCATTGCAGCCACCGATTCCCAGGCCCTGGCTGGCTTCCGCGCT
CTAGCAATGTACGAAGGCATCATTCCCGCGCTAGAGTCCTCTCACGCTGT
CTACGGTGCTATTGAACTCGCCAAGACAATGAAGAAGGGCGAACAGGATA
TTGTTCTCAACCTTAGCGGACGAGGTGACAAGGATGTCAATACTGTCGCT
GAGGTCCTGCCTCGTCTGGGACCTGAGATCGGGTGGGATTTGTGGTTTTG
A
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004834tryptophan synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0000162tryptophan biosynthetic process
GO:0006568tryptophan metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TRP3_1ATCC64974_41610Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_41610-T1.exon1ATCC64974_41610-T1.exon1Aspergillus niger N402exon
ATCC64974_41610-T1.exon2ATCC64974_41610-T1.exon2Aspergillus niger N402exon
ATCC64974_41610-T1.exon3ATCC64974_41610-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_41610-T1.cdsATCC64974_41610-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_41610-T1ATCC64974_41610-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09260XOG
DBxrefInterPro:IPR036052
DBxrefInterPro:IPR011060
DBxrefInterPro:IPR023026
DBxrefInterPro:IPR006653
DBxrefInterPro:IPR018204
DBxrefInterPro:IPR006654
DBxrefInterPro:IPR001926
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR002028
DBxrefPFAM:PF00290
DBxrefPFAM:PF00291
Productanthranilate synthase / indole-3-glycerol phosphate synthase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000006.1supercontigOGUI01000006.1:833577..835829 +
Powered by Drupal