You are here

Home

ATCC64974_41650-T1, ATCC64974_41650-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_41650-T1
Unique NameATCC64974_41650-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000006.1:842919..843902+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_41650-T1 ID=ATCC64974_41650-T1|Name=ATCC64974_41650-T1|organism=Aspergillus niger N402|type=mRNA|length=984bp|location=Sequence derived from alignment at OGUI01000006.1:842919..843902+ (Aspergillus niger N402)
ATGTCCCGACAGATCAAGAATGTCGTCATCGCGGGGGTAGGTTGGAACTT
CTAATCGTAATGACTTTCAAGACATGCCACTAATCCATAATCTCAGGCCA
CCGGAAACCTTGGATCGTATATCCTTACCGCATTGGTGAACCATGGCAGC
TTTAATATTACCGTCTTGACACGCAAGAATGGTGTCAGTTTCCCGACTGG
CGTCACGGCCAAGGTGGTGGATTTCAGCTCTCCCGCGGAATTAGGGCTCG
CTCTTCAGGGTCAGGATGCCGTGGTCGATGCAATCTTGAGTCCCAACCCT
ACCGTTTCCATTGGCTTGATCGATGCCGCGGTCGCTGCCGGAGTTTATCG
CTACATCGCCCCTGAGTTCACCATCCATCCTAAGTACGACAAGACACGGT
CACTGCCCATCTTCCGGGGCAAGGCGCAGATCTATGATCATCTCCAGAAG
GTCGCCAATGATCAGAAGATCACATGGACTGCCATTTCTAATGGTGCCTT
TCTGGACTGGTGTCTGCGATCGGGCTTTTTGAATATTGACTTGATCAAGA
AAAAGATTCTGCTCATGAACGATGGTACCCGTGTCTTCCCTTTGACCGTT
CTTCCCGCCGTTGGTACGGCCGTTGCCAATGCCCTGGCTCAAGCTGAGAA
AACCAAGAATATGCACTGCTCTATCTACGGTGTTCAGAAGAGTCAAAAAG
AGATTGCCGATCTGGCAAAGGAAGCACTTGGACCCGACGGCTGGGAGGTC
GAAAGCCAGGATATGGAAAAGGCCTTCGAAGAAGCTTTATCTGCCACAGC
TATTGGAAACTACAGCTGGACGGTTGTGGGAGACTTAATCCGGTATTCAC
TCGCAACCCCAGGCTATAATGGTGTGTTTGAGGAGAATCACAATGATCTA
TTAGGCGTTCAACCCATGAGCGGTGAGCAGGTCAAGGCCTTGATTAAGGA
AATCTACGATGAGCTGAAGTGTGCTCCACACTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000006.1:842919..843902+

>ATCC64974_41650-T1 ID=ATCC64974_41650-T1|Name=ATCC64974_41650-T1|organism=Aspergillus niger N402|type=CDS|length=1848bp|location=Sequence derived from alignment at OGUI01000006.1:842919..843902+ (Aspergillus niger N402)
ATGTCCCGACAGATCAAGAATGTCGTCATCGCGGGGGCCACCGGAAACCT
TGGATCGTATATCCTTACCGCATTGGTGAACCATGGCAGCTTTAATATTA
CCGTCTTGACACGCAAGAATGGTGTCAGTTTCCCGACTGGCGTCACGGCC
AAGGTGGTGGATTTCAGCTCTCCCGCGGAATTAGGGCTCGCTCTTCAGGG
TCAGGATGCCGTGGTCGATGCAATCTTGAGTCCCAACCCTACCGTTTCCA
TTGGCTTGATCGATGCCGCGGTCGCTGCCGGAGTTTATCGCTACATCGCC
CCTGAGTTCACCATCCATCCTAAGTACGACAAGACACGGTCACTGCCCAT
CTTCCGGGGCAAGGCGCAGATCTATGATCATCTCCAGAAGGTCGCCAATG
ATCAGAAGATCACATGGACTGCCATTTCTAATGGTGCCTTTCTGGACTGG
TGTCTGCGATCGGGCTTTTTGAATATTGACTTGATCAAGAAAAAGATTCT
GCTCATGAACGATGGTACCCGTGTCTTCCCTTTGACCGTTCTTCCCGCCG
TTGGTACGGCCGTTGCCAATGCCCTGGCTCAAGCTGAGAAAACCAAGAAT
ATGCACTGCTCTATCTACGGTGTTCAGAAGAGTCAAAAAGAGATTGCCGA
TCTGGCAAAGGAAGCACTTGGACCCGACGGCTGGGAGGTCGAAAGCCAGG
ATATGGAAAAGGCCTTCGAAGAAGCTTTATCTGCCACAGCTATTGGAAAC
TACAGCTGGACGGTTGTGGGAGACTTAATCCGGTATTCACTCGCAACCCC
AGGCTATAATGGTGTGTTTGAGGAGAATCACAATGATCTATTAGGCGTTC
AACCCATGAGCGGTGAGCAGGTCAAGGCCTTGATTAAGGAAATCTACGAT
GAGCTGAAGTGTGCTCCACACTAGATGTCCCGACAGATCAAGAATGTCGT
CATCGCGGGGGCCACCGGAAACCTTGGATCGTATATCCTTACCGCATTGG
TGAACCATGGCAGCTTTAATATTACCGTCTTGACACGCAAGAATGGTGTC
AGTTTCCCGACTGGCGTCACGGCCAAGGTGGTGGATTTCAGCTCTCCCGC
GGAATTAGGGCTCGCTCTTCAGGGTCAGGATGCCGTGGTCGATGCAATCT
TGAGTCCCAACCCTACCGTTTCCATTGGCTTGATCGATGCCGCGGTCGCT
GCCGGAGTTTATCGCTACATCGCCCCTGAGTTCACCATCCATCCTAAGTA
CGACAAGACACGGTCACTGCCCATCTTCCGGGGCAAGGCGCAGATCTATG
ATCATCTCCAGAAGGTCGCCAATGATCAGAAGATCACATGGACTGCCATT
TCTAATGGTGCCTTTCTGGACTGGTGTCTGCGATCGGGCTTTTTGAATAT
TGACTTGATCAAGAAAAAGATTCTGCTCATGAACGATGGTACCCGTGTCT
TCCCTTTGACCGTTCTTCCCGCCGTTGGTACGGCCGTTGCCAATGCCCTG
GCTCAAGCTGAGAAAACCAAGAATATGCACTGCTCTATCTACGGTGTTCA
GAAGAGTCAAAAAGAGATTGCCGATCTGGCAAAGGAAGCACTTGGACCCG
ACGGCTGGGAGGTCGAAAGCCAGGATATGGAAAAGGCCTTCGAAGAAGCT
TTATCTGCCACAGCTATTGGAAACTACAGCTGGACGGTTGTGGGAGACTT
AATCCGGTATTCACTCGCAACCCCAGGCTATAATGGTGTGTTTGAGGAGA
ATCACAATGATCTATTAGGCGTTCAACCCATGAGCGGTGAGCAGGTCAAG
GCCTTGATTAAGGAAATCTACGATGAGCTGAAGTGTGCTCCACACTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_41650ATCC64974_41650Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_41650-T1.exon1ATCC64974_41650-T1.exon1Aspergillus niger N402exon
ATCC64974_41650-T1.exon2ATCC64974_41650-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_41650-T1.cdsATCC64974_41650-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_41650-T1ATCC64974_41650-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008030
DBxrefPFAM:PF05368
DBxrefPFAM:PF13460
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000006.1supercontigOGUI01000006.1:842919..843902 +
Powered by Drupal