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ATCC64974_4170-T1, ATCC64974_4170-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_4170-T1
Unique NameATCC64974_4170-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:1266505..1267260-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_4170-T1 ID=ATCC64974_4170-T1|Name=ATCC64974_4170-T1|organism=Aspergillus niger N402|type=mRNA|length=756bp|location=Sequence derived from alignment at OGUI01000001.1:1266505..1267260- (Aspergillus niger N402)
ATGGCCACTGCACTACCCACTTTGGCCATCCCAGGCCAGCGCCTAGGCTC
AATTGCCTCGTATGCCGCCGGTCCTGGTACACATGTGCAGAACGCAACCA
TCTATGCCTCGATCGCAGGCCCCGTGGTCGTCGATCAAGCGCAACCCAGC
TCCAAAGCAAAGCTCATCTTGAGCGTCTCCCGAACAGGCCCCAAGAAGGC
TGCTGCACCGGCACCCAGCACCAAGGCGTCCGCCAACCCCGCCAACACTG
GAAAGCCGAAGCTGAGATACAACACCCTCCCTGCCGTCGACTCGGTCGTG
TTGGCGCGCGTAACTCGCGTTCAGAAGCGACAAGCCACCGTATCTATTCT
AGTCGTGCTCGACGAATCCGCTAGCTCCCAGCCGCTCAACCCCTCACAGA
CTGCGTCGGACAATGACAACATCGAAGCTATCCTTTCGTCCGCGGCTAAT
CCGGAGAACCACAGCAACTCGGATGAACTTCGCTTCCAGGCTCTGATCCG
CAAGGAGGACGTGCGTGCTGTTGAGAAAGACCGCGTTGTCATGGATGAGA
TGTTCCGTGTTGGGGATATCGTTCGCGGAACGGTTATCTCCCTTGGTGAT
CAAAGCTTCTACTATCTTACCACGGCTAGGAATGATCTGGGTGTCGTTAT
GGCCCGCAGTGAGTCGGGTAATATGATGTTCCCGGTTAGCTGGAAGGAAA
TGAGAGATCCTGTTACTGGGGTTGCGGAGTTGAGGAAGGTAGCTAGGCCG
TTTTGA
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Coding sequence (CDS) from alignment at OGUI01000001.1:1266505..1267260-

>ATCC64974_4170-T1 ID=ATCC64974_4170-T1|Name=ATCC64974_4170-T1|organism=Aspergillus niger N402|type=CDS|length=756bp|location=Sequence derived from alignment at OGUI01000001.1:1266505..1267260- (Aspergillus niger N402)
ATGGCCACTGCACTACCCACTTTGGCCATCCCAGGCCAGCGCCTAGGCTC
AATTGCCTCGTATGCCGCCGGTCCTGGTACACATGTGCAGAACGCAACCA
TCTATGCCTCGATCGCAGGCCCCGTGGTCGTCGATCAAGCGCAACCCAGC
TCCAAAGCAAAGCTCATCTTGAGCGTCTCCCGAACAGGCCCCAAGAAGGC
TGCTGCACCGGCACCCAGCACCAAGGCGTCCGCCAACCCCGCCAACACTG
GAAAGCCGAAGCTGAGATACAACACCCTCCCTGCCGTCGACTCGGTCGTG
TTGGCGCGCGTAACTCGCGTTCAGAAGCGACAAGCCACCGTATCTATTCT
AGTCGTGCTCGACGAATCCGCTAGCTCCCAGCCGCTCAACCCCTCACAGA
CTGCGTCGGACAATGACAACATCGAAGCTATCCTTTCGTCCGCGGCTAAT
CCGGAGAACCACAGCAACTCGGATGAACTTCGCTTCCAGGCTCTGATCCG
CAAGGAGGACGTGCGTGCTGTTGAGAAAGACCGCGTTGTCATGGATGAGA
TGTTCCGTGTTGGGGATATCGTTCGCGGAACGGTTATCTCCCTTGGTGAT
CAAAGCTTCTACTATCTTACCACGGCTAGGAATGATCTGGGTGTCGTTAT
GGCCCGCAGTGAGTCGGGTAATATGATGTTCCCGGTTAGCTGGAAGGAAA
TGAGAGATCCTGTTACTGGGGTTGCGGAGTTGAGGAAGGTAGCTAGGCCG
TTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000178exosome (RNase complex)
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_4170ATCC64974_4170Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_4170-T1.cdsATCC64974_4170-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_4170-T1.exon1ATCC64974_4170-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_4170-T1ATCC64974_4170-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092653O3
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR019495
DBxrefInterPro:IPR025721
DBxrefPFAM:PF10447
DBxrefPFAM:PF14382
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:1266505..1267260 -
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