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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000006.1:904624..906276- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_41800-T1 ID=ATCC64974_41800-T1|Name=ATCC64974_41800-T1|organism=Aspergillus niger N402|type=mRNA|length=1653bp|location=Sequence derived from alignment at OGUI01000006.1:904624..906276- (Aspergillus niger N402)
ATGGTCAATCGCGGACCCTCTGGAGGATGTGTTACATGCAAAACACGACG
TGTCAAATGTGACGAGGCGAAGCCCGAATGCCACGCGTGTCAACGCCTCA
ACCTTCGTTGCGGGGGCTACAAGCCAAAGCCTGTCAAGATTAGGTTCAGG
GATCAAACCGCCAAGGTTTGCAACGACCTTGTTTCGAAGCAAGCCGCTCA
GAATCAACAATGGGTGCCTTGCTTGCGATCGCTAGCCGAACCCGACCCTG
CTGTCCCATTCTTCATTCGACATTACGGCGTCATGGGTCGCAATGCGAAG
TCTGCCCGTGGGTTTTTCGAGATATTAGCTCCAGTATACGCTACTCAGCA
GCAGAACTCGCCTCTCTCGCTCGCGGTGACTGCCGTGGCTTCGGAAATCC
TGTCGCGTTGGCGGCACGAGAGTAGCTCCCGAGCATCTTGGGAGACCTAT
ACCCAGGCCATCAAGCGTCTTCGGGAGACTCTCCAGGATCGCAATGAATT
GACAAACCCGGCAACAATGTTAGCCGTGTTGGCGCTGCAATTTTATGAAA
ATTTCGCTGTTATATACGGCAGTCACCAAGCCACGGGAGTACACCACGAG
GGAGCCGTCTCCTTGCTCCCACTCACAGATCAGGATCATGCCAGTGGGTC
GCTGATCGCACACATTCGGCGATGTATCCTTCACAATGAGATTTTATCAG
CGATACGTCATAAACGGCTTCTGCATAGCACGGCCCACTCGCGTCTTGGG
TGCATAGAGCCGACAATTGCGCCAGGTAATTTAGGCCCCGCACTCGATGC
AATAGGCGTATCCGTGGCCGAGTTGAATGCAAGTTATTGGCAGCAAGCAG
CCCACGTAGGTTCCATGTCTTCGACAAAAATCTGCAGAGACTGGAGAGCC
GAGGCAAAGTGTATTGACGAACGACTCCTTGCTTGGGCACAAAACGTCCC
GCAACATTTGCAGCCGGTGAGACTCCCGGATGGAATCGCTCTCGACCCTT
CGATCCCAACTTACAATTCTATGTGCGACGTCTACATTTCGTGCCAGATT
GGATCACTGTGGAACGAATGGCGCGCTCAACGCCTCTTGCTCGTCAAGAT
AATCCTCAGCTCGCTTAGTACCATTCCCACCGCTGGCCATCTTGCGCAAT
CAAATGCTGAAACCGAAGAGTTCGCCGAGTATAAGCACCTTCTTCAAGAG
CTGGTCGATTCGGTCTGTTACAGCGTGCCCTATTATCTTGGGAACCAAGG
CGGATGGTTAAGTATTCCCGACTTAACCGATCCAGCAATTGTGTTTCCTA
GCCATCGCTTACTAGACAATGTCAACCAGCAAAAGTCTGCGCAGAAGTCA
GAAGACGAGCACAGTAGTCATATTATCGCCCAAGGGCCGTGGCACGTCAT
GAGTGTGTTGAGTCGCGTGGTGGCATTCTTCATCGAGGACCATGGTCAGG
GGATGGTGTCTTTTCTCCGACCTGGACAGCTCGAGTGGATCCGGGAGCAG
TTCCTGCGTGTCACGCAGCTACTCCGTATTCCGTTGGAGGAGGCCAGTGA
TGGTAAAGCGAGATTCTATCCGTTGGACCGGTCTTTACAAGCAGATCTAG
ATGCCAAAATTGACAATCTCGCAAAGCGGATCAGGAAGGGCGCGTTTATA
TGA back to topCoding sequence (CDS) from alignment at OGUI01000006.1:904624..906276- >ATCC64974_41800-T1 ID=ATCC64974_41800-T1|Name=ATCC64974_41800-T1|organism=Aspergillus niger N402|type=CDS|length=1653bp|location=Sequence derived from alignment at OGUI01000006.1:904624..906276- (Aspergillus niger N402)
ATGGTCAATCGCGGACCCTCTGGAGGATGTGTTACATGCAAAACACGACG
TGTCAAATGTGACGAGGCGAAGCCCGAATGCCACGCGTGTCAACGCCTCA
ACCTTCGTTGCGGGGGCTACAAGCCAAAGCCTGTCAAGATTAGGTTCAGG
GATCAAACCGCCAAGGTTTGCAACGACCTTGTTTCGAAGCAAGCCGCTCA
GAATCAACAATGGGTGCCTTGCTTGCGATCGCTAGCCGAACCCGACCCTG
CTGTCCCATTCTTCATTCGACATTACGGCGTCATGGGTCGCAATGCGAAG
TCTGCCCGTGGGTTTTTCGAGATATTAGCTCCAGTATACGCTACTCAGCA
GCAGAACTCGCCTCTCTCGCTCGCGGTGACTGCCGTGGCTTCGGAAATCC
TGTCGCGTTGGCGGCACGAGAGTAGCTCCCGAGCATCTTGGGAGACCTAT
ACCCAGGCCATCAAGCGTCTTCGGGAGACTCTCCAGGATCGCAATGAATT
GACAAACCCGGCAACAATGTTAGCCGTGTTGGCGCTGCAATTTTATGAAA
ATTTCGCTGTTATATACGGCAGTCACCAAGCCACGGGAGTACACCACGAG
GGAGCCGTCTCCTTGCTCCCACTCACAGATCAGGATCATGCCAGTGGGTC
GCTGATCGCACACATTCGGCGATGTATCCTTCACAATGAGATTTTATCAG
CGATACGTCATAAACGGCTTCTGCATAGCACGGCCCACTCGCGTCTTGGG
TGCATAGAGCCGACAATTGCGCCAGGTAATTTAGGCCCCGCACTCGATGC
AATAGGCGTATCCGTGGCCGAGTTGAATGCAAGTTATTGGCAGCAAGCAG
CCCACGTAGGTTCCATGTCTTCGACAAAAATCTGCAGAGACTGGAGAGCC
GAGGCAAAGTGTATTGACGAACGACTCCTTGCTTGGGCACAAAACGTCCC
GCAACATTTGCAGCCGGTGAGACTCCCGGATGGAATCGCTCTCGACCCTT
CGATCCCAACTTACAATTCTATGTGCGACGTCTACATTTCGTGCCAGATT
GGATCACTGTGGAACGAATGGCGCGCTCAACGCCTCTTGCTCGTCAAGAT
AATCCTCAGCTCGCTTAGTACCATTCCCACCGCTGGCCATCTTGCGCAAT
CAAATGCTGAAACCGAAGAGTTCGCCGAGTATAAGCACCTTCTTCAAGAG
CTGGTCGATTCGGTCTGTTACAGCGTGCCCTATTATCTTGGGAACCAAGG
CGGATGGTTAAGTATTCCCGACTTAACCGATCCAGCAATTGTGTTTCCTA
GCCATCGCTTACTAGACAATGTCAACCAGCAAAAGTCTGCGCAGAAGTCA
GAAGACGAGCACAGTAGTCATATTATCGCCCAAGGGCCGTGGCACGTCAT
GAGTGTGTTGAGTCGCGTGGTGGCATTCTTCATCGAGGACCATGGTCAGG
GGATGGTGTCTTTTCTCCGACCTGGACAGCTCGAGTGGATCCGGGAGCAG
TTCCTGCGTGTCACGCAGCTACTCCGTATTCCGTTGGAGGAGGCCAGTGA
TGGTAAAGCGAGATTCTATCCGTTGGACCGGTCTTTACAAGCAGATCTAG
ATGCCAAAATTGACAATCTCGCAAAGCGGATCAGGAAGGGCGCGTTTATA
TGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_41800-T1 | ATCC64974_41800-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000006.1 | supercontig | OGUI01000006.1:904624..906276 - |
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