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ATCC64974_42540-T1, ATCC64974_42540-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_42540-T1
Unique NameATCC64974_42540-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000006.1:1109223..1110086-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_42540-T1 ID=ATCC64974_42540-T1|Name=ATCC64974_42540-T1|organism=Aspergillus niger N402|type=mRNA|length=864bp|location=Sequence derived from alignment at OGUI01000006.1:1109223..1110086- (Aspergillus niger N402)
ATGGCTCTACCAGCTTGCAATCTGCTCAAGGGCAAAACAGCTGCCATCAC
CGGCGGCACGACAGGAATCGGGCGTGCGATCGCATTGGCCTTCATCACCC
AAGGCTGCAATGTTGCAGTCAACCATCTGGGTCTCCCCCAAGACGAGGTG
CATCGGCACAGTCTGCTTGACGAAGTCAAGTCCATCCAACAAGGCGGCAT
TGCGGCTGGCAAGATTCTCGAGATTCCGGGCGATGTGACTGCCCCGGAGA
CCAGCATAAACCTCGTCAAAGAAGCCGTTTCTCAATGGGGGAAGCTAGAT
ATTTTTGTCGCCAACGCAGGCGTGTTCAAACAAGCTGAATTTCTCCAGTG
AGTCTATTATCCTATAGTGAACGACAGAGAAGTGGTCACTAACATACCCA
GGATCGAGTCGTCTCTTCTCGACCACAGCATCGACGTCAACATCAAAGGC
TGCTTCTACTCCTGCCAAGCAGCTGCCCGGCAGATGGTCAAGCAGGGCCA
TGGCGGCTCCATCATCGGTATCTCCTCCGTCAGCGCGCTGGTCGGTGGAG
GCCTCCAGACCCACTACACGCCCACTAAGGCCGCTGTGCTTTCCATGATG
CAGTCCATGGCCATTTCTCTGGGCAAGGATCGGATCAGATGCAATGCTCT
GATGCCTGGGACCATCGCTACTCAGTTGGCTGATCATGATATGAAGAACC
CTACCAAGAAGGCTGCGCTCGAGGCGCGCATTCCGTTGGGGCGGATCGGA
AACCCGGACGATATGGCTGGCCCAGCGGTATTTCTGGCTTGTGAGGAGAT
GAGTCGATATGTAAATGCCACAGGGCTGTTGGCAGACGGTGGGATGTTTA
GTAACTTGCAATAG
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Coding sequence (CDS) from alignment at OGUI01000006.1:1109223..1110086-

>ATCC64974_42540-T1 ID=ATCC64974_42540-T1|Name=ATCC64974_42540-T1|organism=Aspergillus niger N402|type=CDS|length=1620bp|location=Sequence derived from alignment at OGUI01000006.1:1109223..1110086- (Aspergillus niger N402)
GATCGAGTCGTCTCTTCTCGACCACAGCATCGACGTCAACATCAAAGGCT
GCTTCTACTCCTGCCAAGCAGCTGCCCGGCAGATGGTCAAGCAGGGCCAT
GGCGGCTCCATCATCGGTATCTCCTCCGTCAGCGCGCTGGTCGGTGGAGG
CCTCCAGACCCACTACACGCCCACTAAGGCCGCTGTGCTTTCCATGATGC
AGTCCATGGCCATTTCTCTGGGCAAGGATCGGATCAGATGCAATGCTCTG
ATGCCTGGGACCATCGCTACTCAGTTGGCTGATCATGATATGAAGAACCC
TACCAAGAAGGCTGCGCTCGAGGCGCGCATTCCGTTGGGGCGGATCGGAA
ACCCGGACGATATGGCTGGCCCAGCGGTATTTCTGGCTTGTGAGGAGATG
AGTCGATATGTAAATGCCACAGGGCTGTTGGCAGACGGTGGGATGTTTAG
TAACTTGCAATAGATGGCTCTACCAGCTTGCAATCTGCTCAAGGGCAAAA
CAGCTGCCATCACCGGCGGCACGACAGGAATCGGGCGTGCGATCGCATTG
GCCTTCATCACCCAAGGCTGCAATGTTGCAGTCAACCATCTGGGTCTCCC
CCAAGACGAGGTGCATCGGCACAGTCTGCTTGACGAAGTCAAGTCCATCC
AACAAGGCGGCATTGCGGCTGGCAAGATTCTCGAGATTCCGGGCGATGTG
ACTGCCCCGGAGACCAGCATAAACCTCGTCAAAGAAGCCGTTTCTCAATG
GGGGAAGCTAGATATTTTTGTCGCCAACGCAGGCGTGTTCAAACAAGCTG
AATTTCTCCAGATCGAGTCGTCTCTTCTCGACCACAGCATCGACGTCAAC
ATCAAAGGCTGCTTCTACTCCTGCCAAGCAGCTGCCCGGCAGATGGTCAA
GCAGGGCCATGGCGGCTCCATCATCGGTATCTCCTCCGTCAGCGCGCTGG
TCGGTGGAGGCCTCCAGACCCACTACACGCCCACTAAGGCCGCTGTGCTT
TCCATGATGCAGTCCATGGCCATTTCTCTGGGCAAGGATCGGATCAGATG
CAATGCTCTGATGCCTGGGACCATCGCTACTCAGTTGGCTGATCATGATA
TGAAGAACCCTACCAAGAAGGCTGCGCTCGAGGCGCGCATTCCGTTGGGG
CGGATCGGAAACCCGGACGATATGGCTGGCCCAGCGGTATTTCTGGCTTG
TGAGGAGATGAGTCGATATGTAAATGCCACAGGGCTGTTGGCAGACGGTG
GGATGTTTAGTAACTTGCAATAGATGGCTCTACCAGCTTGCAATCTGCTC
AAGGGCAAAACAGCTGCCATCACCGGCGGCACGACAGGAATCGGGCGTGC
GATCGCATTGGCCTTCATCACCCAAGGCTGCAATGTTGCAGTCAACCATC
TGGGTCTCCCCCAAGACGAGGTGCATCGGCACAGTCTGCTTGACGAAGTC
AAGTCCATCCAACAAGGCGGCATTGCGGCTGGCAAGATTCTCGAGATTCC
GGGCGATGTGACTGCCCCGGAGACCAGCATAAACCTCGTCAAAGAAGCCG
TTTCTCAATGGGGGAAGCTAGATATTTTTGTCGCCAACGCAGGCGTGTTC
AAACAAGCTGAATTTCTCCA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_42540ATCC64974_42540Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_42540-T1ATCC64974_42540-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_42540-T1.cdsATCC64974_42540-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_42540-T1.exon2ATCC64974_42540-T1.exon2Aspergillus niger N402exon
ATCC64974_42540-T1.exon1ATCC64974_42540-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000006.1supercontigOGUI01000006.1:1109223..1110086 -
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