You are here

Home

ATCC64974_42730-T1, ATCC64974_42730-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_42730-T1
Unique NameATCC64974_42730-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000006.1:1155162..1156330-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_42730-T1 ID=ATCC64974_42730-T1|Name=ATCC64974_42730-T1|organism=Aspergillus niger N402|type=mRNA|length=1169bp|location=Sequence derived from alignment at OGUI01000006.1:1155162..1156330- (Aspergillus niger N402)
ATGTTTACTCGGCTCGGTCTATACCTCCTGGCCCTGTTCTCTCCCACCCG
TGGCGATACCATCCACCACCGAACTTATTTCTACGTTGGAGGGAACTACT
CAATCACCGACAATGGCGAGCATATTTACACCAATCAGATATATGTCGAA
AAATTGACGCCCGCACAAGTCACTCAGCCATATCCGATAGTGTTTGTCCA
TGGTCAGGCTCAGACAGCGACAGTAGGATAACCCAGGCTCCCTTGGTGAA
ATAACTCTAACAGAGCATGGAATAGAATTGGTTGAACAAACCAGACGGCC
AGCCAGGATGGGCATCATACTTCCTTGACAAGGGCTACGAATGCTACCTC
TTCGATCAGCCGTTCCGGGGCCGCAGTCCCTGGCAATCCTTCAGCGAACC
ACTAGAAACATACTCGGCCGAACACCTGCAACGATACTTCACCGCGCCTG
AACGGTATGAGCTGTGGCCACAGGCATCGCTGCACACCCAGTGGCCTGGG
ACTGGGGTCATGCGCGATCCCATCTTTGATTCCTATTATGCCAGTGCTGT
GCCGTTTGTTAGTGATAATGTACTGCAGCAAACTGCCATGCGCGACGCGG
GCGCCGCCTTGCTGGATCGAATTGGCCGGCCAGTTATTCTGATAGCTCAT
TCCCAAGGTGGAACCATGGCGTGGCTACTGGCCGACCAACGATCCAATCT
GGTTCACTCGATTGTCTCCATCGAGCCTGGTGGTCCCCCGTTCAGCAACG
CAATGTTCGGAAACACTTCTGCTCGAGCATACGGGCTGACTGACATCCCG
ATTGCGTACTCGCCGCCAGTGTCGGACCCGAGCACAGACTTCTCCACCAC
TATTCTTCCGTCCAACTCGTCAATTCTAGCGGACTGCATCATTCAGGCGG
ATGATCCGCCTGCGCGGCAACTGGCGAAACTGAGCAAAATTCCCGTGCTA
CTAGTGACGACGGAAGCTTCGTACCATGCGCAGTATGACTGGTGCACGGT
AAGGTTCTTGCAACAAGCCGGCGTACAGGCAGAGCACATGCAATTGTCAG
AAATCGGCATTCACGGCAATGGTCATATGGTATTTCTGGAGGAGAACAGT
GACGAGGTTGCGGCTGTTATTCATGACAGGATTGGACAGTCCGATGTGGA
TGGGAAAGCTGAGCTTTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000006.1:1155162..1156330-

>ATCC64974_42730-T1 ID=ATCC64974_42730-T1|Name=ATCC64974_42730-T1|organism=Aspergillus niger N402|type=CDS|length=2232bp|location=Sequence derived from alignment at OGUI01000006.1:1155162..1156330- (Aspergillus niger N402)
AATTGGTTGAACAAACCAGACGGCCAGCCAGGATGGGCATCATACTTCCT
TGACAAGGGCTACGAATGCTACCTCTTCGATCAGCCGTTCCGGGGCCGCA
GTCCCTGGCAATCCTTCAGCGAACCACTAGAAACATACTCGGCCGAACAC
CTGCAACGATACTTCACCGCGCCTGAACGGTATGAGCTGTGGCCACAGGC
ATCGCTGCACACCCAGTGGCCTGGGACTGGGGTCATGCGCGATCCCATCT
TTGATTCCTATTATGCCAGTGCTGTGCCGTTTGTTAGTGATAATGTACTG
CAGCAAACTGCCATGCGCGACGCGGGCGCCGCCTTGCTGGATCGAATTGG
CCGGCCAGTTATTCTGATAGCTCATTCCCAAGGTGGAACCATGGCGTGGC
TACTGGCCGACCAACGATCCAATCTGGTTCACTCGATTGTCTCCATCGAG
CCTGGTGGTCCCCCGTTCAGCAACGCAATGTTCGGAAACACTTCTGCTCG
AGCATACGGGCTGACTGACATCCCGATTGCGTACTCGCCGCCAGTGTCGG
ACCCGAGCACAGACTTCTCCACCACTATTCTTCCGTCCAACTCGTCAATT
CTAGCGGACTGCATCATTCAGGCGGATGATCCGCCTGCGCGGCAACTGGC
GAAACTGAGCAAAATTCCCGTGCTACTAGTGACGACGGAAGCTTCGTACC
ATGCGCAGTATGACTGGTGCACGGTAAGGTTCTTGCAACAAGCCGGCGTA
CAGGCAGAGCACATGCAATTGTCAGAAATCGGCATTCACGGCAATGGTCA
TATGGTATTTCTGGAGGAGAACAGTGACGAGGTTGCGGCTGTTATTCATG
ACAGGATTGGACAGTCCGATGTGGATGGGAAAGCTGAGCTTTGAATGTTT
ACTCGGCTCGGTCTATACCTCCTGGCCCTGTTCTCTCCCACCCGTGGCGA
TACCATCCACCACCGAACTTATTTCTACGTTGGAGGGAACTACTCAATCA
CCGACAATGGCGAGCATATTTACACCAATCAGATATATGTCGAAAAATTG
ACGCCCGCACAAGTCACTCAGCCATATCCGATAGTGTTTGTCCATGGTCA
GGCTCAGACAGCGACAAATTGGTTGAACAAACCAGACGGCCAGCCAGGAT
GGGCATCATACTTCCTTGACAAGGGCTACGAATGCTACCTCTTCGATCAG
CCGTTCCGGGGCCGCAGTCCCTGGCAATCCTTCAGCGAACCACTAGAAAC
ATACTCGGCCGAACACCTGCAACGATACTTCACCGCGCCTGAACGGTATG
AGCTGTGGCCACAGGCATCGCTGCACACCCAGTGGCCTGGGACTGGGGTC
ATGCGCGATCCCATCTTTGATTCCTATTATGCCAGTGCTGTGCCGTTTGT
TAGTGATAATGTACTGCAGCAAACTGCCATGCGCGACGCGGGCGCCGCCT
TGCTGGATCGAATTGGCCGGCCAGTTATTCTGATAGCTCATTCCCAAGGT
GGAACCATGGCGTGGCTACTGGCCGACCAACGATCCAATCTGGTTCACTC
GATTGTCTCCATCGAGCCTGGTGGTCCCCCGTTCAGCAACGCAATGTTCG
GAAACACTTCTGCTCGAGCATACGGGCTGACTGACATCCCGATTGCGTAC
TCGCCGCCAGTGTCGGACCCGAGCACAGACTTCTCCACCACTATTCTTCC
GTCCAACTCGTCAATTCTAGCGGACTGCATCATTCAGGCGGATGATCCGC
CTGCGCGGCAACTGGCGAAACTGAGCAAAATTCCCGTGCTACTAGTGACG
ACGGAAGCTTCGTACCATGCGCAGTATGACTGGTGCACGGTAAGGTTCTT
GCAACAAGCCGGCGTACAGGCAGAGCACATGCAATTGTCAGAAATCGGCA
TTCACGGCAATGGTCATATGGTATTTCTGGAGGAGAACAGTGACGAGGTT
GCGGCTGTTATTCATGACAGGATTGGACAGTCCGATGTGGATGGGAAAGC
TGAGCTTTGAATGTTTACTCGGCTCGGTCTATACCTCCTGGCCCTGTTCT
CTCCCACCCGTGGCGATACCATCCACCACCGAACTTATTTCTACGTTGGA
GGGAACTACTCAATCACCGACAATGGCGAGCATATTTACACCAATCAGAT
ATATGTCGAAAAATTGACGCCCGCACAAGTCACTCAGCCATATCCGATAG
TGTTTGTCCATGGTCAGGCTCAGACAGCGACA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_42730ATCC64974_42730Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_42730-T1ATCC64974_42730-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_42730-T1.cdsATCC64974_42730-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_42730-T1.exon2ATCC64974_42730-T1.exon2Aspergillus niger N402exon
ATCC64974_42730-T1.exon1ATCC64974_42730-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-18)
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR000073
DBxrefPFAM:PF12697
DBxrefPFAM:PF00561
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000006.1supercontigOGUI01000006.1:1155162..1156330 -
Powered by Drupal