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ATCC64974_42740-T1, ATCC64974_42740-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_42740-T1
Unique NameATCC64974_42740-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000006.1:1157826..1158853+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_42740-T1 ID=ATCC64974_42740-T1|Name=ATCC64974_42740-T1|organism=Aspergillus niger N402|type=mRNA|length=1028bp|location=Sequence derived from alignment at OGUI01000006.1:1157826..1158853+ (Aspergillus niger N402)
ATGCTCAGGCGCCTTCTTCGCCAAGTGCGGCGACATGACTGGAGATGTCT
GATGGCATATTCAGCGCTGATCATCCCATCGGCTGCCGTCTTTCTGTATC
TTCTTCTGGCATACTACCTGGCGGGAGATCCCCGGCTTGTTCCACACACC
ATCCAGCAAGCGCGGAACGTTCTCCTTGTCACGGCACATCCCGATGACGA
GACTCTGTTCTTTAGCCCAACTATTCTTCACGGCCGCAACAACCCGGACG
TCACCCGTTCCTTGTTGGTATTATCGACAGGCGAGTCCTCCCTTCACTTA
GAATTTCCGAGGAGTGAATTTTTTAATGTGATGCAGGCGACTATCATGGC
CAAGGAGATATCCGCAAAGGGGAGATCGAACGCAGTTGCGCGGCTCTCGG
CATCCCCTCCGATCGCTGTGTCGTCCTCGAGCATGGTGCATTACAGGATA
ACCCAAAGAAGTGGTGGCGCCAGGATGTCATCCAGGATATAGTGGCTCAT
TACGTTCACATGTGGAAAGTGGATCTAGTAAGTTGCCCCAACACTCTTTC
ACGATAGTACACAGGAGCACTAAGACTACAGAAGATCTATACTTTCGACG
ATGGTGGAGTATCCGGCCATATCAACCATAGGGCCGTCAGTGCCGGAGTT
CGGTACGTCGACCATACATCACCACTGCGAAAAAGTCTGACTGTGAGTAG
GAAATATGCAGAGAGCTTTCCGCATGCCCCGCCGGTCTACGCGCTACAGA
GTACATTCCTCCTGCGCAAGTACTCGTCGCTTATTGATCTGATCTTGACA
TCAGTGCCATTCTCATGGCGCATCGGAGCAGCGGTCTTGACAGCCCCACC
GGTGCCCACAGAGCACGATACATATGGAAATAAAGCGCTGCTGGTAAGCC
CGTGGCAGACCTATCTTACTGCGCGAACAGCATTCAGTCAGCATGATAGT
CAGTACTCGTGGGATCGCGTGCTGTACTTGGTAGTGAGCCGTTATATGTG
GTTCAATAATCTATACCGGATAGCCTAA
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Coding sequence (CDS) from alignment at OGUI01000006.1:1157826..1158853+

>ATCC64974_42740-T1 ID=ATCC64974_42740-T1|Name=ATCC64974_42740-T1|organism=Aspergillus niger N402|type=CDS|length=3468bp|location=Sequence derived from alignment at OGUI01000006.1:1157826..1158853+ (Aspergillus niger N402)
ATGCTCAGGCGCCTTCTTCGCCAAGTGCGGCGACATGACTGGAGATGTCT
GATGGCATATTCAGCGCTGATCATCCCATCGGCTGCCGTCTTTCTGTATC
TTCTTCTGGCATACTACCTGGCGGGAGATCCCCGGCTTGTTCCACACACC
ATCCAGCAAGCGCGGAACGTTCTCCTTGTCACGGCACATCCCGATGACGA
GACTCTGTTCTTTAGCCCAACTATTCTTCACGGCCGCAACAACCCGGACG
TCACCCGTTCCTTGTTGGTATTATCGACAGGCGACTATCATGGCCAAGGA
GATATCCGCAAAGGGGAGATCGAACGCAGTTGCGCGGCTCTCGGCATCCC
CTCCGATCGCTGTGTCGTCCTCGAGCATGGTGCATTACAGGATAACCCAA
AGAAGTGGTGGCGCCAGGATGTCATCCAGGATATAGTGGCTCATTACGTT
CACATGTGGAAAGTGGATCTAATCTATACTTTCGACGATGGTGGAGTATC
CGGCCATATCAACCATAGGGCCGTCAGTGCCGGAGTTCGGAAATATGCAG
AGAGCTTTCCGCATGCCCCGCCGGTCTACGCGCTACAGAGTACATTCCTC
CTGCGCAAGTACTCGTCGCTTATTGATCTGATCTTGACATCAGTGCCATT
CTCATGGCGCATCGGAGCAGCGGTCTTGACAGCCCCACCGGTGCCCACAG
AGCACGATACATATGGAAATAAAGCGCTGCTGGTAAGCCCGTGGCAGACC
TATCTTACTGCGCGAACAGCATTCAGTCAGCATGATAGTCAGTACTCGTG
GGATCGCGTGCTGTACTTGGTAGTGAGCCGTTATATGTGGTTCAATAATC
TATACCGGATAGCCTAAATGCTCAGGCGCCTTCTTCGCCAAGTGCGGCGA
CATGACTGGAGATGTCTGATGGCATATTCAGCGCTGATCATCCCATCGGC
TGCCGTCTTTCTGTATCTTCTTCTGGCATACTACCTGGCGGGAGATCCCC
GGCTTGTTCCACACACCATCCAGCAAGCGCGGAACGTTCTCCTTGTCACG
GCACATCCCGATGACGAGACTCTGTTCTTTAGCCCAACTATTCTTCACGG
CCGCAACAACCCGGACGTCACCCGTTCCTTGTTGGTATTATCGACAGGCG
ACTATCATGGCCAAGGAGATATCCGCAAAGGGGAGATCGAACGCAGTTGC
GCGGCTCTCGGCATCCCCTCCGATCGCTGTGTCGTCCTCGAGCATGGTGC
ATTACAGGATAACCCAAAGAAGTGGTGGCGCCAGGATGTCATCCAGGATA
TAGTGGCTCATTACGTTCACATGTGGAAAGTGGATCTAATCTATACTTTC
GACGATGGTGGAGTATCCGGCCATATCAACCATAGGGCCGTCAGTGCCGG
AGTTCGGAAATATGCAGAGAGCTTTCCGCATGCCCCGCCGGTCTACGCGC
TACAGAGTACATTCCTCCTGCGCAAGTACTCGTCGCTTATTGATCTGATC
TTGACATCAGTGCCATTCTCATGGCGCATCGGAGCAGCGGTCTTGACAGC
CCCACCGGTGCCCACAGAGCACGATACATATGGAAATAAAGCGCTGCTGG
TAAGCCCGTGGCAGACCTATCTTACTGCGCGAACAGCATTCAGTCAGCAT
GATAGTCAGTACTCGTGGGATCGCGTGCTGTACTTGGTAGTGAGCCGTTA
TATGTGGTTCAATAATCTATACCGGATAGCCTAAATGCTCAGGCGCCTTC
TTCGCCAAGTGCGGCGACATGACTGGAGATGTCTGATGGCATATTCAGCG
CTGATCATCCCATCGGCTGCCGTCTTTCTGTATCTTCTTCTGGCATACTA
CCTGGCGGGAGATCCCCGGCTTGTTCCACACACCATCCAGCAAGCGCGGA
ACGTTCTCCTTGTCACGGCACATCCCGATGACGAGACTCTGTTCTTTAGC
CCAACTATTCTTCACGGCCGCAACAACCCGGACGTCACCCGTTCCTTGTT
GGTATTATCGACAGGCGACTATCATGGCCAAGGAGATATCCGCAAAGGGG
AGATCGAACGCAGTTGCGCGGCTCTCGGCATCCCCTCCGATCGCTGTGTC
GTCCTCGAGCATGGTGCATTACAGGATAACCCAAAGAAGTGGTGGCGCCA
GGATGTCATCCAGGATATAGTGGCTCATTACGTTCACATGTGGAAAGTGG
ATCTAATCTATACTTTCGACGATGGTGGAGTATCCGGCCATATCAACCAT
AGGGCCGTCAGTGCCGGAGTTCGGAAATATGCAGAGAGCTTTCCGCATGC
CCCGCCGGTCTACGCGCTACAGAGTACATTCCTCCTGCGCAAGTACTCGT
CGCTTATTGATCTGATCTTGACATCAGTGCCATTCTCATGGCGCATCGGA
GCAGCGGTCTTGACAGCCCCACCGGTGCCCACAGAGCACGATACATATGG
AAATAAAGCGCTGCTGGTAAGCCCGTGGCAGACCTATCTTACTGCGCGAA
CAGCATTCAGTCAGCATGATAGTCAGTACTCGTGGGATCGCGTGCTGTAC
TTGGTAGTGAGCCGTTATATGTGGTTCAATAATCTATACCGGATAGCCTA
AATGCTCAGGCGCCTTCTTCGCCAAGTGCGGCGACATGACTGGAGATGTC
TGATGGCATATTCAGCGCTGATCATCCCATCGGCTGCCGTCTTTCTGTAT
CTTCTTCTGGCATACTACCTGGCGGGAGATCCCCGGCTTGTTCCACACAC
CATCCAGCAAGCGCGGAACGTTCTCCTTGTCACGGCACATCCCGATGACG
AGACTCTGTTCTTTAGCCCAACTATTCTTCACGGCCGCAACAACCCGGAC
GTCACCCGTTCCTTGTTGGTATTATCGACAGGCGACTATCATGGCCAAGG
AGATATCCGCAAAGGGGAGATCGAACGCAGTTGCGCGGCTCTCGGCATCC
CCTCCGATCGCTGTGTCGTCCTCGAGCATGGTGCATTACAGGATAACCCA
AAGAAGTGGTGGCGCCAGGATGTCATCCAGGATATAGTGGCTCATTACGT
TCACATGTGGAAAGTGGATCTAATCTATACTTTCGACGATGGTGGAGTAT
CCGGCCATATCAACCATAGGGCCGTCAGTGCCGGAGTTCGGAAATATGCA
GAGAGCTTTCCGCATGCCCCGCCGGTCTACGCGCTACAGAGTACATTCCT
CCTGCGCAAGTACTCGTCGCTTATTGATCTGATCTTGACATCAGTGCCAT
TCTCATGGCGCATCGGAGCAGCGGTCTTGACAGCCCCACCGGTGCCCACA
GAGCACGATACATATGGAAATAAAGCGCTGCTGGTAAGCCCGTGGCAGAC
CTATCTTACTGCGCGAACAGCATTCAGTCAGCATGATAGTCAGTACTCGT
GGGATCGCGTGCTGTACTTGGTAGTGAGCCGTTATATGTGGTTCAATAAT
CTATACCGGATAGCCTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_42740ATCC64974_42740Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_42740-T1.exon1ATCC64974_42740-T1.exon1Aspergillus niger N402exon
ATCC64974_42740-T1.exon2ATCC64974_42740-T1.exon2Aspergillus niger N402exon
ATCC64974_42740-T1.exon3ATCC64974_42740-T1.exon3Aspergillus niger N402exon
ATCC64974_42740-T1.exon4ATCC64974_42740-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_42740-T1.cdsATCC64974_42740-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_42740-T1ATCC64974_42740-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR024078
DBxrefInterPro:IPR003737
DBxrefPFAM:PF02585
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000006.1supercontigOGUI01000006.1:1157826..1158853 +
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