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ATCC64974_42870-T1, ATCC64974_42870-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_42870-T1
Unique NameATCC64974_42870-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000006.1:1185920..1187258-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_42870-T1 ID=ATCC64974_42870-T1|Name=ATCC64974_42870-T1|organism=Aspergillus niger N402|type=mRNA|length=1339bp|location=Sequence derived from alignment at OGUI01000006.1:1185920..1187258- (Aspergillus niger N402)
ATGGTCCGTCAGCTTATCCTGATCAGCAGTCTGCTGGCAGCTGTTGCTGT
GCGCGCGGCGCCTGCCGATCCGGCTCATCCCATGGTTACGGAAGCGCCTG
ACGTCAATTTGGTTGAAAAGAGGGCGACTACTTGCACCTTCTCGGGCTCC
GAAGGTGCATCCAAGGCCAGCAAGTCGAAAACCTCTTGCTCCACAATCTA
CCTGTCCGACGTGGCCGTCCCATCTGGCACAACCCTTGATCTCTCTGACC
TGAATGATGGAACCCACGTACGTTCCCCGGGTGATTCATGTCTTATTCTC
ACACCCAATCGCGTCAATAGTACTGGCTGACAGATGTACTAGGTGATCTT
CCAGGGAGAAACCACTTTTGGATACGAGGAATGGGAAGGGCCTCTTGTGC
GTGTTTCTGGAACTGATATCACGGTCGAGGGGGAGAGCGACGCGGTGCTC
AATGGCGATGGCAGCCGCTGGTGGGATGGAGAGGGTGGCAATGGTGGTAA
AACAAAGCCCAAGTTCTTCTATGCCCATGACTTGACCTCTTCCACCATCA
AGAGCATCTACATCGAGAACTCTCCTGTGCAGGTGTTCAGCATCGATGGC
TCCACTGATCTTACCATGACTGATATCACGGTGGATAACACGGATGGTGA
CACGGACGACCTCGCCGCCAATACGGATGGCTTCGACATCGGGGAAAGCA
CCTATATCACGATCACAGGTGCCGAAATCTACAACCAAGATGACTGCGTT
GCCATCAATTCTGGAGAGGTATGCGTCCCCTGGCACTGATTGAGAGGAGA
GGCGCCTTGCTGACGATCTGGTAGAACATTTATTTCAGTGCCAGTGTGTG
TTCTGGTGGTCACGGCCTGTCTATTGGCTCTGTTGGTGGTCGGGATGATA
ACACTGTCAAGAACGTGACGTTTTATGATGTCAATGTTCTCAAGTCCCAG
CAAGGTAAGGGAAAGCATTTGAACCATCCGTTTGCCGTCCTCTAACGTAT
GCTTTAGCAATCCGTATCAAGACCATCTACGGCGACACTGGCTCCGTCAG
CGAAGTCACTTACCATGAGATTGCCTTTTCGGACGCTACTGATTACGGCA
TTGTCATTGAGCAGAACTATGATGACACCTCCAAGACCCCTACTACCGGG
GTACCGATCACGGATTTTGTGCTCGAGAACATCGTTGGAACGTGTGAAGA
TGATGATTGTACCGAAGTATACATTGCCTGCGGTGATGGCAGCTGCTCGG
ATTGGACTTGGACTGGCGTGAGCGTGACTGGCGGCAGTGTCAGTGACGAC
TGCCTTAATGTTCCCTCCGGGATTAGCTGCGATTTGTAG
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Coding sequence (CDS) from alignment at OGUI01000006.1:1185920..1187258-

>ATCC64974_42870-T1 ID=ATCC64974_42870-T1|Name=ATCC64974_42870-T1|organism=Aspergillus niger N402|type=CDS|length=4620bp|location=Sequence derived from alignment at OGUI01000006.1:1185920..1187258- (Aspergillus niger N402)
CAATCCGTATCAAGACCATCTACGGCGACACTGGCTCCGTCAGCGAAGTC
ACTTACCATGAGATTGCCTTTTCGGACGCTACTGATTACGGCATTGTCAT
TGAGCAGAACTATGATGACACCTCCAAGACCCCTACTACCGGGGTACCGA
TCACGGATTTTGTGCTCGAGAACATCGTTGGAACGTGTGAAGATGATGAT
TGTACCGAAGTATACATTGCCTGCGGTGATGGCAGCTGCTCGGATTGGAC
TTGGACTGGCGTGAGCGTGACTGGCGGCAGTGTCAGTGACGACTGCCTTA
ATGTTCCCTCCGGGATTAGCTGCGATTTGTAGAACATTTATTTCAGTGCC
AGTGTGTGTTCTGGTGGTCACGGCCTGTCTATTGGCTCTGTTGGTGGTCG
GGATGATAACACTGTCAAGAACGTGACGTTTTATGATGTCAATGTTCTCA
AGTCCCAGCAAGGTGATCTTCCAGGGAGAAACCACTTTTGGATACGAGGA
ATGGGAAGGGCCTCTTGTGCGTGTTTCTGGAACTGATATCACGGTCGAGG
GGGAGAGCGACGCGGTGCTCAATGGCGATGGCAGCCGCTGGTGGGATGGA
GAGGGTGGCAATGGTGGTAAAACAAAGCCCAAGTTCTTCTATGCCCATGA
CTTGACCTCTTCCACCATCAAGAGCATCTACATCGAGAACTCTCCTGTGC
AGGTGTTCAGCATCGATGGCTCCACTGATCTTACCATGACTGATATCACG
GTGGATAACACGGATGGTGACACGGACGACCTCGCCGCCAATACGGATGG
CTTCGACATCGGGGAAAGCACCTATATCACGATCACAGGTGCCGAAATCT
ACAACCAAGATGACTGCGTTGCCATCAATTCTGGAGAGATGGTCCGTCAG
CTTATCCTGATCAGCAGTCTGCTGGCAGCTGTTGCTGTGCGCGCGGCGCC
TGCCGATCCGGCTCATCCCATGGTTACGGAAGCGCCTGACGTCAATTTGG
TTGAAAAGAGGGCGACTACTTGCACCTTCTCGGGCTCCGAAGGTGCATCC
AAGGCCAGCAAGTCGAAAACCTCTTGCTCCACAATCTACCTGTCCGACGT
GGCCGTCCCATCTGGCACAACCCTTGATCTCTCTGACCTGAATGATGGAA
CCCACCAATCCGTATCAAGACCATCTACGGCGACACTGGCTCCGTCAGCG
AAGTCACTTACCATGAGATTGCCTTTTCGGACGCTACTGATTACGGCATT
GTCATTGAGCAGAACTATGATGACACCTCCAAGACCCCTACTACCGGGGT
ACCGATCACGGATTTTGTGCTCGAGAACATCGTTGGAACGTGTGAAGATG
ATGATTGTACCGAAGTATACATTGCCTGCGGTGATGGCAGCTGCTCGGAT
TGGACTTGGACTGGCGTGAGCGTGACTGGCGGCAGTGTCAGTGACGACTG
CCTTAATGTTCCCTCCGGGATTAGCTGCGATTTGTAGAACATTTATTTCA
GTGCCAGTGTGTGTTCTGGTGGTCACGGCCTGTCTATTGGCTCTGTTGGT
GGTCGGGATGATAACACTGTCAAGAACGTGACGTTTTATGATGTCAATGT
TCTCAAGTCCCAGCAAGGTGATCTTCCAGGGAGAAACCACTTTTGGATAC
GAGGAATGGGAAGGGCCTCTTGTGCGTGTTTCTGGAACTGATATCACGGT
CGAGGGGGAGAGCGACGCGGTGCTCAATGGCGATGGCAGCCGCTGGTGGG
ATGGAGAGGGTGGCAATGGTGGTAAAACAAAGCCCAAGTTCTTCTATGCC
CATGACTTGACCTCTTCCACCATCAAGAGCATCTACATCGAGAACTCTCC
TGTGCAGGTGTTCAGCATCGATGGCTCCACTGATCTTACCATGACTGATA
TCACGGTGGATAACACGGATGGTGACACGGACGACCTCGCCGCCAATACG
GATGGCTTCGACATCGGGGAAAGCACCTATATCACGATCACAGGTGCCGA
AATCTACAACCAAGATGACTGCGTTGCCATCAATTCTGGAGAGATGGTCC
GTCAGCTTATCCTGATCAGCAGTCTGCTGGCAGCTGTTGCTGTGCGCGCG
GCGCCTGCCGATCCGGCTCATCCCATGGTTACGGAAGCGCCTGACGTCAA
TTTGGTTGAAAAGAGGGCGACTACTTGCACCTTCTCGGGCTCCGAAGGTG
CATCCAAGGCCAGCAAGTCGAAAACCTCTTGCTCCACAATCTACCTGTCC
GACGTGGCCGTCCCATCTGGCACAACCCTTGATCTCTCTGACCTGAATGA
TGGAACCCACCAATCCGTATCAAGACCATCTACGGCGACACTGGCTCCGT
CAGCGAAGTCACTTACCATGAGATTGCCTTTTCGGACGCTACTGATTACG
GCATTGTCATTGAGCAGAACTATGATGACACCTCCAAGACCCCTACTACC
GGGGTACCGATCACGGATTTTGTGCTCGAGAACATCGTTGGAACGTGTGA
AGATGATGATTGTACCGAAGTATACATTGCCTGCGGTGATGGCAGCTGCT
CGGATTGGACTTGGACTGGCGTGAGCGTGACTGGCGGCAGTGTCAGTGAC
GACTGCCTTAATGTTCCCTCCGGGATTAGCTGCGATTTGTAGAACATTTA
TTTCAGTGCCAGTGTGTGTTCTGGTGGTCACGGCCTGTCTATTGGCTCTG
TTGGTGGTCGGGATGATAACACTGTCAAGAACGTGACGTTTTATGATGTC
AATGTTCTCAAGTCCCAGCAAGGTGATCTTCCAGGGAGAAACCACTTTTG
GATACGAGGAATGGGAAGGGCCTCTTGTGCGTGTTTCTGGAACTGATATC
ACGGTCGAGGGGGAGAGCGACGCGGTGCTCAATGGCGATGGCAGCCGCTG
GTGGGATGGAGAGGGTGGCAATGGTGGTAAAACAAAGCCCAAGTTCTTCT
ATGCCCATGACTTGACCTCTTCCACCATCAAGAGCATCTACATCGAGAAC
TCTCCTGTGCAGGTGTTCAGCATCGATGGCTCCACTGATCTTACCATGAC
TGATATCACGGTGGATAACACGGATGGTGACACGGACGACCTCGCCGCCA
ATACGGATGGCTTCGACATCGGGGAAAGCACCTATATCACGATCACAGGT
GCCGAAATCTACAACCAAGATGACTGCGTTGCCATCAATTCTGGAGAGAT
GGTCCGTCAGCTTATCCTGATCAGCAGTCTGCTGGCAGCTGTTGCTGTGC
GCGCGGCGCCTGCCGATCCGGCTCATCCCATGGTTACGGAAGCGCCTGAC
GTCAATTTGGTTGAAAAGAGGGCGACTACTTGCACCTTCTCGGGCTCCGA
AGGTGCATCCAAGGCCAGCAAGTCGAAAACCTCTTGCTCCACAATCTACC
TGTCCGACGTGGCCGTCCCATCTGGCACAACCCTTGATCTCTCTGACCTG
AATGATGGAACCCACCAATCCGTATCAAGACCATCTACGGCGACACTGGC
TCCGTCAGCGAAGTCACTTACCATGAGATTGCCTTTTCGGACGCTACTGA
TTACGGCATTGTCATTGAGCAGAACTATGATGACACCTCCAAGACCCCTA
CTACCGGGGTACCGATCACGGATTTTGTGCTCGAGAACATCGTTGGAACG
TGTGAAGATGATGATTGTACCGAAGTATACATTGCCTGCGGTGATGGCAG
CTGCTCGGATTGGACTTGGACTGGCGTGAGCGTGACTGGCGGCAGTGTCA
GTGACGACTGCCTTAATGTTCCCTCCGGGATTAGCTGCGATTTGTAGAAC
ATTTATTTCAGTGCCAGTGTGTGTTCTGGTGGTCACGGCCTGTCTATTGG
CTCTGTTGGTGGTCGGGATGATAACACTGTCAAGAACGTGACGTTTTATG
ATGTCAATGTTCTCAAGTCCCAGCAAGGTGATCTTCCAGGGAGAAACCAC
TTTTGGATACGAGGAATGGGAAGGGCCTCTTGTGCGTGTTTCTGGAACTG
ATATCACGGTCGAGGGGGAGAGCGACGCGGTGCTCAATGGCGATGGCAGC
CGCTGGTGGGATGGAGAGGGTGGCAATGGTGGTAAAACAAAGCCCAAGTT
CTTCTATGCCCATGACTTGACCTCTTCCACCATCAAGAGCATCTACATCG
AGAACTCTCCTGTGCAGGTGTTCAGCATCGATGGCTCCACTGATCTTACC
ATGACTGATATCACGGTGGATAACACGGATGGTGACACGGACGACCTCGC
CGCCAATACGGATGGCTTCGACATCGGGGAAAGCACCTATATCACGATCA
CAGGTGCCGAAATCTACAACCAAGATGACTGCGTTGCCATCAATTCTGGA
GAGATGGTCCGTCAGCTTATCCTGATCAGCAGTCTGCTGGCAGCTGTTGC
TGTGCGCGCGGCGCCTGCCGATCCGGCTCATCCCATGGTTACGGAAGCGC
CTGACGTCAATTTGGTTGAAAAGAGGGCGACTACTTGCACCTTCTCGGGC
TCCGAAGGTGCATCCAAGGCCAGCAAGTCGAAAACCTCTTGCTCCACAAT
CTACCTGTCCGACGTGGCCGTCCCATCTGGCACAACCCTTGATCTCTCTG
ACCTGAATGATGGAACCCAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_42870ATCC64974_42870Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_42870-T1ATCC64974_42870-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_42870-T1.cdsATCC64974_42870-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_42870-T1.exon4ATCC64974_42870-T1.exon4Aspergillus niger N402exon
ATCC64974_42870-T1.exon3ATCC64974_42870-T1.exon3Aspergillus niger N402exon
ATCC64974_42870-T1.exon2ATCC64974_42870-T1.exon2Aspergillus niger N402exon
ATCC64974_42870-T1.exon1ATCC64974_42870-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR006626
DBxrefPFAM:PF00295
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000006.1supercontigOGUI01000006.1:1185920..1187258 -
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