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ATCC64974_42890-T1, ATCC64974_42890-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_42890-T1
Unique NameATCC64974_42890-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000006.1:1193768..1195394-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_42890-T1 ID=ATCC64974_42890-T1|Name=ATCC64974_42890-T1|organism=Aspergillus niger N402|type=mRNA|length=1627bp|location=Sequence derived from alignment at OGUI01000006.1:1193768..1195394- (Aspergillus niger N402)
ATGCCTCACTCAGAAGCCCCTCAGGAGCAAACGATTGCCAGTGCCGACGT
GACGAGCGGCGCTCAGGGCGTACGTATACCGTATACATTAGTTTCAGGGA
ATATGCTAATAACTAGACCAGCAACAAACCCAGATTCGGGTCCTAGTCGC
CTGCCCTCGTTCGGGCTCCACACTCTTCATGCGTATCTTTCGCGAACTCC
CTCGTTGTGCGGTTACGAGTCGCTTGATTCTGCAAGGCAACTACCACAAA
TTCAGCGACCAAACTCTAGCTCGAATCAAGCCCGACTATACTATCTTCTC
TCATCCAGAAGCCCATCCCGTCTACCATCAAGCGGTGTCAGAAGGCTTCA
CCACTCTGGTCACGAAAGAGGAATTGGGTCACGAGTTCTTCAAGGGTGAA
TGCGACTTCAACATCCTGCCCGATCGAGCAGCCTACGAGATGACGCGGCC
CGCGTTTCTTGTCCGGGACCCAGTGCGTGTCTTTGATAGCTGGAAAAATA
TGGGCTGGGGCGACCTATACAGCTTTTTCATTTGCTATCGTTCACTTTTC
AGAATGCTCAATGCTAGCCCAGCACCTCAAGTTGTCCTGTATGAACAATT
GGTGGCCGACCCCAGAGACACAGTAACCGCACTGGCACAGTACTGGGGCA
TCGCATACGATGAAGGCTGTTTGGAATTTAGGCAGCCGTTTGGGGATTAC
CTATTCAACGGTGACCGAGAACAATCGATCTATCAGGGTGCCGTTCCTGC
CGGCCTCTTCAACCGCGTCAAGTCCCACACCCATGTTGAAGACTTCCAGG
GCCATGGTCTGCTATCCGCACTGGAAATTGAACATATCGAAGCCGAAGTA
GGCGGCCTGTACCTTGAGGCTTATGGCTCACAGCTAGACCCCATTTCAAG
TCTTCTCTTCAAAAAGACGTGGTTTGGTTTCGATCTAGATGACACACTGC
ACGAGTTTCGCAAGGCGTCTGCCCATGCATCCCAATCAGTCTTCGCGGCA
ATTCGAGTCAACCATCCCGAGAGCAAAGACACAATTGACGATCTCCAGGC
GACCTATCGTGACATCCTTCGGTCAAATTCTTCAAATGCGTTCACAGATG
GAAAGTCATCCGAAGATTACCGCAGTGATAGATTTCAACGTTTGCTCGAA
GCCCACGGGCATGAGCCTTCCCGGGTAGAAGTGGAAGAGCTGTTGGCAAT
ATACAAAAGCAGTCTCCGTGCCGCCCTGACACTGAAGGCTGGGGCACTTC
GTCTCCTACAGAAGCTCAAGTCCCATGGGAAGAAAGTTATTATTATCACC
GAGGGTCCACAAGATGCACAGGAATGGACGGTGTCAGAGCTTGGGTTACA
GCCATTCATAGATATCCTCGTCACCACCAATGAGGTCGGAGTGTCCAAGG
TGGATGGTCTATTTTCCGCTGTTCTGGAAAGGCATAGCATCGTCCCAACT
GACATGGTCTATGTGGGGGATAGCGAACAGCGTGACATCGGACCAGCACG
GGCTGCAGGGATAGATACTGTCTTGTATGACGAGAAGAGCAACTGTCGGC
TTCGGGACCCTCACAGCCTGCGGCTAAACTCACTCCCAAAATTAGAGTAC
CTCATGGGCCGTCATGAAGGTGCCTAA
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Coding sequence (CDS) from alignment at OGUI01000006.1:1193768..1195394-

>ATCC64974_42890-T1 ID=ATCC64974_42890-T1|Name=ATCC64974_42890-T1|organism=Aspergillus niger N402|type=CDS|length=3150bp|location=Sequence derived from alignment at OGUI01000006.1:1193768..1195394- (Aspergillus niger N402)
CAACAAACCCAGATTCGGGTCCTAGTCGCCTGCCCTCGTTCGGGCTCCAC
ACTCTTCATGCGTATCTTTCGCGAACTCCCTCGTTGTGCGGTTACGAGTC
GCTTGATTCTGCAAGGCAACTACCACAAATTCAGCGACCAAACTCTAGCT
CGAATCAAGCCCGACTATACTATCTTCTCTCATCCAGAAGCCCATCCCGT
CTACCATCAAGCGGTGTCAGAAGGCTTCACCACTCTGGTCACGAAAGAGG
AATTGGGTCACGAGTTCTTCAAGGGTGAATGCGACTTCAACATCCTGCCC
GATCGAGCAGCCTACGAGATGACGCGGCCCGCGTTTCTTGTCCGGGACCC
AGTGCGTGTCTTTGATAGCTGGAAAAATATGGGCTGGGGCGACCTATACA
GCTTTTTCATTTGCTATCGTTCACTTTTCAGAATGCTCAATGCTAGCCCA
GCACCTCAAGTTGTCCTGTATGAACAATTGGTGGCCGACCCCAGAGACAC
AGTAACCGCACTGGCACAGTACTGGGGCATCGCATACGATGAAGGCTGTT
TGGAATTTAGGCAGCCGTTTGGGGATTACCTATTCAACGGTGACCGAGAA
CAATCGATCTATCAGGGTGCCGTTCCTGCCGGCCTCTTCAACCGCGTCAA
GTCCCACACCCATGTTGAAGACTTCCAGGGCCATGGTCTGCTATCCGCAC
TGGAAATTGAACATATCGAAGCCGAAGTAGGCGGCCTGTACCTTGAGGCT
TATGGCTCACAGCTAGACCCCATTTCAAGTCTTCTCTTCAAAAAGACGTG
GTTTGGTTTCGATCTAGATGACACACTGCACGAGTTTCGCAAGGCGTCTG
CCCATGCATCCCAATCAGTCTTCGCGGCAATTCGAGTCAACCATCCCGAG
AGCAAAGACACAATTGACGATCTCCAGGCGACCTATCGTGACATCCTTCG
GTCAAATTCTTCAAATGCGTTCACAGATGGAAAGTCATCCGAAGATTACC
GCAGTGATAGATTTCAACGTTTGCTCGAAGCCCACGGGCATGAGCCTTCC
CGGGTAGAAGTGGAAGAGCTGTTGGCAATATACAAAAGCAGTCTCCGTGC
CGCCCTGACACTGAAGGCTGGGGCACTTCGTCTCCTACAGAAGCTCAAGT
CCCATGGGAAGAAAGTTATTATTATCACCGAGGGTCCACAAGATGCACAG
GAATGGACGGTGTCAGAGCTTGGGTTACAGCCATTCATAGATATCCTCGT
CACCACCAATGAGGTCGGAGTGTCCAAGGTGGATGGTCTATTTTCCGCTG
TTCTGGAAAGGCATAGCATCGTCCCAACTGACATGGTCTATGTGGGGGAT
AGCGAACAGCGTGACATCGGACCAGCACGGGCTGCAGGGATAGATACTGT
CTTGTATGACGAGAAGAGCAACTGTCGGCTTCGGGACCCTCACAGCCTGC
GGCTAAACTCACTCCCAAAATTAGAGTACCTCATGGGCCGTCATGAAGGT
GCCTAAATGCCTCACTCAGAAGCCCCTCAGGAGCAAACGATTGCCAGTGC
CGACGTGACGAGCGGCGCTCAGGGCCAACAAACCCAGATTCGGGTCCTAG
TCGCCTGCCCTCGTTCGGGCTCCACACTCTTCATGCGTATCTTTCGCGAA
CTCCCTCGTTGTGCGGTTACGAGTCGCTTGATTCTGCAAGGCAACTACCA
CAAATTCAGCGACCAAACTCTAGCTCGAATCAAGCCCGACTATACTATCT
TCTCTCATCCAGAAGCCCATCCCGTCTACCATCAAGCGGTGTCAGAAGGC
TTCACCACTCTGGTCACGAAAGAGGAATTGGGTCACGAGTTCTTCAAGGG
TGAATGCGACTTCAACATCCTGCCCGATCGAGCAGCCTACGAGATGACGC
GGCCCGCGTTTCTTGTCCGGGACCCAGTGCGTGTCTTTGATAGCTGGAAA
AATATGGGCTGGGGCGACCTATACAGCTTTTTCATTTGCTATCGTTCACT
TTTCAGAATGCTCAATGCTAGCCCAGCACCTCAAGTTGTCCTGTATGAAC
AATTGGTGGCCGACCCCAGAGACACAGTAACCGCACTGGCACAGTACTGG
GGCATCGCATACGATGAAGGCTGTTTGGAATTTAGGCAGCCGTTTGGGGA
TTACCTATTCAACGGTGACCGAGAACAATCGATCTATCAGGGTGCCGTTC
CTGCCGGCCTCTTCAACCGCGTCAAGTCCCACACCCATGTTGAAGACTTC
CAGGGCCATGGTCTGCTATCCGCACTGGAAATTGAACATATCGAAGCCGA
AGTAGGCGGCCTGTACCTTGAGGCTTATGGCTCACAGCTAGACCCCATTT
CAAGTCTTCTCTTCAAAAAGACGTGGTTTGGTTTCGATCTAGATGACACA
CTGCACGAGTTTCGCAAGGCGTCTGCCCATGCATCCCAATCAGTCTTCGC
GGCAATTCGAGTCAACCATCCCGAGAGCAAAGACACAATTGACGATCTCC
AGGCGACCTATCGTGACATCCTTCGGTCAAATTCTTCAAATGCGTTCACA
GATGGAAAGTCATCCGAAGATTACCGCAGTGATAGATTTCAACGTTTGCT
CGAAGCCCACGGGCATGAGCCTTCCCGGGTAGAAGTGGAAGAGCTGTTGG
CAATATACAAAAGCAGTCTCCGTGCCGCCCTGACACTGAAGGCTGGGGCA
CTTCGTCTCCTACAGAAGCTCAAGTCCCATGGGAAGAAAGTTATTATTAT
CACCGAGGGTCCACAAGATGCACAGGAATGGACGGTGTCAGAGCTTGGGT
TACAGCCATTCATAGATATCCTCGTCACCACCAATGAGGTCGGAGTGTCC
AAGGTGGATGGTCTATTTTCCGCTGTTCTGGAAAGGCATAGCATCGTCCC
AACTGACATGGTCTATGTGGGGGATAGCGAACAGCGTGACATCGGACCAG
CACGGGCTGCAGGGATAGATACTGTCTTGTATGACGAGAAGAGCAACTGT
CGGCTTCGGGACCCTCACAGCCTGCGGCTAAACTCACTCCCAAAATTAGA
GTACCTCATGGGCCGTCATGAAGGTGCCTAAATGCCTCACTCAGAAGCCC
CTCAGGAGCAAACGATTGCCAGTGCCGACGTGACGAGCGGCGCTCAGGGC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_42890ATCC64974_42890Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_42890-T1ATCC64974_42890-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_42890-T1.cdsATCC64974_42890-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_42890-T1.exon2ATCC64974_42890-T1.exon2Aspergillus niger N402exon
ATCC64974_42890-T1.exon1ATCC64974_42890-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR036412
DBxrefInterPro:IPR041492
DBxrefInterPro:IPR023214
DBxrefInterPro:IPR023198
DBxrefPFAM:PF00702
DBxrefPFAM:PF13419
DBxrefPFAM:PF12710
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000006.1supercontigOGUI01000006.1:1193768..1195394 -
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