You are here

Home

ATCC64974_42920-T1, ATCC64974_42920-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_42920-T1
Unique NameATCC64974_42920-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000006.1:1204949..1206482-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_42920-T1 ID=ATCC64974_42920-T1|Name=ATCC64974_42920-T1|organism=Aspergillus niger N402|type=mRNA|length=1534bp|location=Sequence derived from alignment at OGUI01000006.1:1204949..1206482- (Aspergillus niger N402)
ATGGCAATGTGTGCCTTAGCCTCCGCACGCGCCAGGGATGGCGGTTTATA
TTCGAATCAGCGATCACCGTCACAGTTGTCACATCCGCCACCAGAGGTTT
TCTCGACTGCAGCTAAGGAATCTATCCCTCCGAATTTGGCTGCAGCAAGA
GGCATCGAATATATGAGAGCATGTGCGATTCTCAGCGTTGCCGCCATTCA
AAATGGTCAGATCCGGGAGATGCATCAATATCTAGGGATGTATCATACAT
TAAGTATTATGGAAGGGTTGCACGATGAGAAGTTATGGCCGAGAGACTTG
GGTGTCGTGAACGTGGAGGTTCGACGGAGACTGGTATGTCACTGTGCCTA
TGCGATAGCTTCCACTAGTGTCAAACTAATGCTGGAATTAGTTCTGGTCG
ATGTATACACTAGACGTGTTTTCGGCGACCGTATGGGGAGGCATGATCCG
TTTCAGAGAAGTTCAGTCAAATGTACGCTATCCGAGAGAGGTGAACGACG
ATGTGCTTGATTTTGCAAACGAAGCATCGCTATCGGCGGACTGTACCACG
CCCGCTTCCAATCCTTATGAACCCTCGGTTTGGATGCGTGGGTGGAATTT
CACTACTGATCTTTATCGAATACTGGAGCATGCTATAGACGGCCAGCGGC
AAAGTCTGCGCGCTGAGAATGAGAGCCCCTGGTCGTTATTCCGCCCGACC
CCTGTCCCGGGCCCTTTGATCATGGAGCATGTACATTCCCTATTCTCGGC
CTTACCGTCGCAGCTTCAATCAAGCAAGCCTGCCACCGGTGATCCTGAAC
ATGATATTGTTGGATTCCAATCCGCTAATATCCAAGCAACGCTCCAGCTT
CTTAACATGGTCCTTTCTTCAAGCGAGGACCAAGGAGTGGAGGAGAAATG
CGAGGTTGCCGGGAACGTGCTCAGCGTCTTTAGCACAGTGCCAATTGAAT
ATCTCAGAGCAATCAGTTCCCCGCTGGTATGTTGTTTCCCTGCATACTCT
CATACTTCTCCGCTCCCGCCACTTTGGATACACGAAGCACTAACTCTTGA
AGCTCTACCACTTGGGGGGAATTGGGTTTATCCTTGGGTCTGTCATGGAA
GGAAGCCTGTCTGAGATGTCTTACCAAAGAGTCCGCAAGCTTCTGTAAGA
ATTCAATAGCATCAGGTGTCGGGTTCAAGCCCAAGTTGCTAATTGATGAG
AAGATTAGAGATGGCAGCACTTTTGTCTCAAATGGAGTCAGGCCTTACCC
GCTCCACTGGCGCCAGTGAACGACTCAAATCACAGGTTAAGCGAATAGAT
GACTATATGGATAAAACTCGGCATGCCAATATGCGCTCTGAGCAAGCGGA
AATTGACCAATCGCAAGACTTCGAAGGTTACATACGACCTATCCCAGGCC
AGCCAACAGACTTCGATGACACATTAGCTTATTTCGAACTGCCCCCAGAC
TTACTGGATGACTGGCCCTGGTCGTCTGGAGCTGGCGTGTTGGACGGCAT
GTTTCCGATTGCGTTAAGGAAAACAGACGACTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000006.1:1204949..1206482-

>ATCC64974_42920-T1 ID=ATCC64974_42920-T1|Name=ATCC64974_42920-T1|organism=Aspergillus niger N402|type=CDS|length=5364bp|location=Sequence derived from alignment at OGUI01000006.1:1204949..1206482- (Aspergillus niger N402)
ATTAGAGATGGCAGCACTTTTGTCTCAAATGGAGTCAGGCCTTACCCGCT
CCACTGGCGCCAGTGAACGACTCAAATCACAGGTTAAGCGAATAGATGAC
TATATGGATAAAACTCGGCATGCCAATATGCGCTCTGAGCAAGCGGAAAT
TGACCAATCGCAAGACTTCGAAGGTTACATACGACCTATCCCAGGCCAGC
CAACAGACTTCGATGACACATTAGCTTATTTCGAACTGCCCCCAGACTTA
CTGGATGACTGGCCCTGGTCGTCTGGAGCTGGCGTGTTGGACGGCATGTT
TCCGATTGCGTTAAGGAAAACAGACGACTAGCTCTACCACTTGGGGGGAA
TTGGGTTTATCCTTGGGTCTGTCATGGAAGGAAGCCTGTCTGAGATGTCT
TACCAAAGAGTCCGCAAGCTTCTTTCTGGTCGATGTATACACTAGACGTG
TTTTCGGCGACCGTATGGGGAGGCATGATCCGTTTCAGAGAAGTTCAGTC
AAATGTACGCTATCCGAGAGAGGTGAACGACGATGTGCTTGATTTTGCAA
ACGAAGCATCGCTATCGGCGGACTGTACCACGCCCGCTTCCAATCCTTAT
GAACCCTCGGTTTGGATGCGTGGGTGGAATTTCACTACTGATCTTTATCG
AATACTGGAGCATGCTATAGACGGCCAGCGGCAAAGTCTGCGCGCTGAGA
ATGAGAGCCCCTGGTCGTTATTCCGCCCGACCCCTGTCCCGGGCCCTTTG
ATCATGGAGCATGTACATTCCCTATTCTCGGCCTTACCGTCGCAGCTTCA
ATCAAGCAAGCCTGCCACCGGTGATCCTGAACATGATATTGTTGGATTCC
AATCCGCTAATATCCAAGCAACGCTCCAGCTTCTTAACATGGTCCTTTCT
TCAAGCGAGGACCAAGGAGTGGAGGAGAAATGCGAGGTTGCCGGGAACGT
GCTCAGCGTCTTTAGCACAGTGCCAATTGAATATCTCAGAGCAATCAGTT
CCCCGCTGATGGCAATGTGTGCCTTAGCCTCCGCACGCGCCAGGGATGGC
GGTTTATATTCGAATCAGCGATCACCGTCACAGTTGTCACATCCGCCACC
AGAGGTTTTCTCGACTGCAGCTAAGGAATCTATCCCTCCGAATTTGGCTG
CAGCAAGAGGCATCGAATATATGAGAGCATGTGCGATTCTCAGCGTTGCC
GCCATTCAAAATGGTCAGATCCGGGAGATGCATCAATATCTAGGGATGTA
TCATACATTAAGTATTATGGAAGGGTTGCACGATGAGAAGTTATGGCCGA
GAGACTTGGGTGTCGTGAACGTGGAGGTTCGACGGAGACTGATTAGAGAT
GGCAGCACTTTTGTCTCAAATGGAGTCAGGCCTTACCCGCTCCACTGGCG
CCAGTGAACGACTCAAATCACAGGTTAAGCGAATAGATGACTATATGGAT
AAAACTCGGCATGCCAATATGCGCTCTGAGCAAGCGGAAATTGACCAATC
GCAAGACTTCGAAGGTTACATACGACCTATCCCAGGCCAGCCAACAGACT
TCGATGACACATTAGCTTATTTCGAACTGCCCCCAGACTTACTGGATGAC
TGGCCCTGGTCGTCTGGAGCTGGCGTGTTGGACGGCATGTTTCCGATTGC
GTTAAGGAAAACAGACGACTAGCTCTACCACTTGGGGGGAATTGGGTTTA
TCCTTGGGTCTGTCATGGAAGGAAGCCTGTCTGAGATGTCTTACCAAAGA
GTCCGCAAGCTTCTTTCTGGTCGATGTATACACTAGACGTGTTTTCGGCG
ACCGTATGGGGAGGCATGATCCGTTTCAGAGAAGTTCAGTCAAATGTACG
CTATCCGAGAGAGGTGAACGACGATGTGCTTGATTTTGCAAACGAAGCAT
CGCTATCGGCGGACTGTACCACGCCCGCTTCCAATCCTTATGAACCCTCG
GTTTGGATGCGTGGGTGGAATTTCACTACTGATCTTTATCGAATACTGGA
GCATGCTATAGACGGCCAGCGGCAAAGTCTGCGCGCTGAGAATGAGAGCC
CCTGGTCGTTATTCCGCCCGACCCCTGTCCCGGGCCCTTTGATCATGGAG
CATGTACATTCCCTATTCTCGGCCTTACCGTCGCAGCTTCAATCAAGCAA
GCCTGCCACCGGTGATCCTGAACATGATATTGTTGGATTCCAATCCGCTA
ATATCCAAGCAACGCTCCAGCTTCTTAACATGGTCCTTTCTTCAAGCGAG
GACCAAGGAGTGGAGGAGAAATGCGAGGTTGCCGGGAACGTGCTCAGCGT
CTTTAGCACAGTGCCAATTGAATATCTCAGAGCAATCAGTTCCCCGCTGA
TGGCAATGTGTGCCTTAGCCTCCGCACGCGCCAGGGATGGCGGTTTATAT
TCGAATCAGCGATCACCGTCACAGTTGTCACATCCGCCACCAGAGGTTTT
CTCGACTGCAGCTAAGGAATCTATCCCTCCGAATTTGGCTGCAGCAAGAG
GCATCGAATATATGAGAGCATGTGCGATTCTCAGCGTTGCCGCCATTCAA
AATGGTCAGATCCGGGAGATGCATCAATATCTAGGGATGTATCATACATT
AAGTATTATGGAAGGGTTGCACGATGAGAAGTTATGGCCGAGAGACTTGG
GTGTCGTGAACGTGGAGGTTCGACGGAGACTGATTAGAGATGGCAGCACT
TTTGTCTCAAATGGAGTCAGGCCTTACCCGCTCCACTGGCGCCAGTGAAC
GACTCAAATCACAGGTTAAGCGAATAGATGACTATATGGATAAAACTCGG
CATGCCAATATGCGCTCTGAGCAAGCGGAAATTGACCAATCGCAAGACTT
CGAAGGTTACATACGACCTATCCCAGGCCAGCCAACAGACTTCGATGACA
CATTAGCTTATTTCGAACTGCCCCCAGACTTACTGGATGACTGGCCCTGG
TCGTCTGGAGCTGGCGTGTTGGACGGCATGTTTCCGATTGCGTTAAGGAA
AACAGACGACTAGCTCTACCACTTGGGGGGAATTGGGTTTATCCTTGGGT
CTGTCATGGAAGGAAGCCTGTCTGAGATGTCTTACCAAAGAGTCCGCAAG
CTTCTTTCTGGTCGATGTATACACTAGACGTGTTTTCGGCGACCGTATGG
GGAGGCATGATCCGTTTCAGAGAAGTTCAGTCAAATGTACGCTATCCGAG
AGAGGTGAACGACGATGTGCTTGATTTTGCAAACGAAGCATCGCTATCGG
CGGACTGTACCACGCCCGCTTCCAATCCTTATGAACCCTCGGTTTGGATG
CGTGGGTGGAATTTCACTACTGATCTTTATCGAATACTGGAGCATGCTAT
AGACGGCCAGCGGCAAAGTCTGCGCGCTGAGAATGAGAGCCCCTGGTCGT
TATTCCGCCCGACCCCTGTCCCGGGCCCTTTGATCATGGAGCATGTACAT
TCCCTATTCTCGGCCTTACCGTCGCAGCTTCAATCAAGCAAGCCTGCCAC
CGGTGATCCTGAACATGATATTGTTGGATTCCAATCCGCTAATATCCAAG
CAACGCTCCAGCTTCTTAACATGGTCCTTTCTTCAAGCGAGGACCAAGGA
GTGGAGGAGAAATGCGAGGTTGCCGGGAACGTGCTCAGCGTCTTTAGCAC
AGTGCCAATTGAATATCTCAGAGCAATCAGTTCCCCGCTGATGGCAATGT
GTGCCTTAGCCTCCGCACGCGCCAGGGATGGCGGTTTATATTCGAATCAG
CGATCACCGTCACAGTTGTCACATCCGCCACCAGAGGTTTTCTCGACTGC
AGCTAAGGAATCTATCCCTCCGAATTTGGCTGCAGCAAGAGGCATCGAAT
ATATGAGAGCATGTGCGATTCTCAGCGTTGCCGCCATTCAAAATGGTCAG
ATCCGGGAGATGCATCAATATCTAGGGATGTATCATACATTAAGTATTAT
GGAAGGGTTGCACGATGAGAAGTTATGGCCGAGAGACTTGGGTGTCGTGA
ACGTGGAGGTTCGACGGAGACTGATTAGAGATGGCAGCACTTTTGTCTCA
AATGGAGTCAGGCCTTACCCGCTCCACTGGCGCCAGTGAACGACTCAAAT
CACAGGTTAAGCGAATAGATGACTATATGGATAAAACTCGGCATGCCAAT
ATGCGCTCTGAGCAAGCGGAAATTGACCAATCGCAAGACTTCGAAGGTTA
CATACGACCTATCCCAGGCCAGCCAACAGACTTCGATGACACATTAGCTT
ATTTCGAACTGCCCCCAGACTTACTGGATGACTGGCCCTGGTCGTCTGGA
GCTGGCGTGTTGGACGGCATGTTTCCGATTGCGTTAAGGAAAACAGACGA
CTAGCTCTACCACTTGGGGGGAATTGGGTTTATCCTTGGGTCTGTCATGG
AAGGAAGCCTGTCTGAGATGTCTTACCAAAGAGTCCGCAAGCTTCTTTCT
GGTCGATGTATACACTAGACGTGTTTTCGGCGACCGTATGGGGAGGCATG
ATCCGTTTCAGAGAAGTTCAGTCAAATGTACGCTATCCGAGAGAGGTGAA
CGACGATGTGCTTGATTTTGCAAACGAAGCATCGCTATCGGCGGACTGTA
CCACGCCCGCTTCCAATCCTTATGAACCCTCGGTTTGGATGCGTGGGTGG
AATTTCACTACTGATCTTTATCGAATACTGGAGCATGCTATAGACGGCCA
GCGGCAAAGTCTGCGCGCTGAGAATGAGAGCCCCTGGTCGTTATTCCGCC
CGACCCCTGTCCCGGGCCCTTTGATCATGGAGCATGTACATTCCCTATTC
TCGGCCTTACCGTCGCAGCTTCAATCAAGCAAGCCTGCCACCGGTGATCC
TGAACATGATATTGTTGGATTCCAATCCGCTAATATCCAAGCAACGCTCC
AGCTTCTTAACATGGTCCTTTCTTCAAGCGAGGACCAAGGAGTGGAGGAG
AAATGCGAGGTTGCCGGGAACGTGCTCAGCGTCTTTAGCACAGTGCCAAT
TGAATATCTCAGAGCAATCAGTTCCCCGCTGATGGCAATGTGTGCCTTAG
CCTCCGCACGCGCCAGGGATGGCGGTTTATATTCGAATCAGCGATCACCG
TCACAGTTGTCACATCCGCCACCAGAGGTTTTCTCGACTGCAGCTAAGGA
ATCTATCCCTCCGAATTTGGCTGCAGCAAGAGGCATCGAATATATGAGAG
CATGTGCGATTCTCAGCGTTGCCGCCATTCAAAATGGTCAGATCCGGGAG
ATGCATCAATATCTAGGGATGTATCATACATTAAGTATTATGGAAGGGTT
GCACGATGAGAAGTTATGGCCGAGAGACTTGGGTGTCGTGAACGTGGAGG
TTCGACGGAGACTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_42920ATCC64974_42920Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_42920-T1ATCC64974_42920-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_42920-T1.cdsATCC64974_42920-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_42920-T1.exon4ATCC64974_42920-T1.exon4Aspergillus niger N402exon
ATCC64974_42920-T1.exon3ATCC64974_42920-T1.exon3Aspergillus niger N402exon
ATCC64974_42920-T1.exon2ATCC64974_42920-T1.exon2Aspergillus niger N402exon
ATCC64974_42920-T1.exon1ATCC64974_42920-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR007219
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000006.1supercontigOGUI01000006.1:1204949..1206482 -
Powered by Drupal