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ATCC64974_43900-T1, ATCC64974_43900-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_43900-T1
Unique NameATCC64974_43900-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:228799..229577+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_43900-T1 ID=ATCC64974_43900-T1|Name=ATCC64974_43900-T1|organism=Aspergillus niger N402|type=mRNA|length=779bp|location=Sequence derived from alignment at OGUI01000007.1:228799..229577+ (Aspergillus niger N402)
ATGTCTTCTCCCAAGATCGTCCTCTACACCAACCGCACCTGCCCTTGGGC
TCACCGCGCCCACATTGTTCTCCAGGAGCTCGGTCTCCCCTTCCAAGAGG
TCACCATTGATTTGGATACCCCACGCGAGCCATGGTATCTGGAAGTTAAC
CCGGTATGTCCGACCTACCTATCCACCTTCCACAAAGCTTAGCTAACCAA
CGTTCACAATCAAAGCGTGGTCTCGTTCCCTCCCTCTCCTACAATGGTGA
AGTGATCACCGAATCCGGCATCGTCGCTCAATTCCTCGCCGACGCGTACC
CCTCCCACCTCGTGCCCCCGTCAAACACTCCCGAGGGAGCTCTGCAGCGC
GCCCGCATCGCCTTCTTTGTCGACACTTACTCCAGCAAAGCTGCCCCCCA
CTACAATGCCGCCCTGCGTGGTGCTACCGAAGCCGACCGGAAGGCCGGCG
TTGAGAGCTACGTAGCTGCTATCAAGAAGGAGATCGAGCCCCTCCTGTAC
CAGGGACTGGAGGGAAAGCAGCACGGTCCTTTCTTCGGTGGTAGCGATAA
ATTGACTTTGGTGGAGGTGCTGCTCGGATCGTTCCTGATCCGTCTGCACG
CCTTCGCGGACAAGGAGGCTGACTTGATCGACCCGGCCATCTGGGAGGGA
TTGGCGGAGGCGAAGAACTTCAGCCGTTGGGCGCAGGCGACTCGGGAGCA
TCCTAGCGTCAATGGTATCTTTGATGCTAAGGCATGTGCTGACAGGACGA
AGAAGAAGCTCTTGGCGAACAGGAAGTAG
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Coding sequence (CDS) from alignment at OGUI01000007.1:228799..229577+

>ATCC64974_43900-T1 ID=ATCC64974_43900-T1|Name=ATCC64974_43900-T1|organism=Aspergillus niger N402|type=CDS|length=1434bp|location=Sequence derived from alignment at OGUI01000007.1:228799..229577+ (Aspergillus niger N402)
ATGTCTTCTCCCAAGATCGTCCTCTACACCAACCGCACCTGCCCTTGGGC
TCACCGCGCCCACATTGTTCTCCAGGAGCTCGGTCTCCCCTTCCAAGAGG
TCACCATTGATTTGGATACCCCACGCGAGCCATGGTATCTGGAAGTTAAC
CCGCGTGGTCTCGTTCCCTCCCTCTCCTACAATGGTGAAGTGATCACCGA
ATCCGGCATCGTCGCTCAATTCCTCGCCGACGCGTACCCCTCCCACCTCG
TGCCCCCGTCAAACACTCCCGAGGGAGCTCTGCAGCGCGCCCGCATCGCC
TTCTTTGTCGACACTTACTCCAGCAAAGCTGCCCCCCACTACAATGCCGC
CCTGCGTGGTGCTACCGAAGCCGACCGGAAGGCCGGCGTTGAGAGCTACG
TAGCTGCTATCAAGAAGGAGATCGAGCCCCTCCTGTACCAGGGACTGGAG
GGAAAGCAGCACGGTCCTTTCTTCGGTGGTAGCGATAAATTGACTTTGGT
GGAGGTGCTGCTCGGATCGTTCCTGATCCGTCTGCACGCCTTCGCGGACA
AGGAGGCTGACTTGATCGACCCGGCCATCTGGGAGGGATTGGCGGAGGCG
AAGAACTTCAGCCGTTGGGCGCAGGCGACTCGGGAGCATCCTAGCGTCAA
TGGTATCTTTGATGCTAAGGCATGTGCTGACAGGACGAAGAAGAAGCTCT
TGGCGAACAGGAAGTAGATGTCTTCTCCCAAGATCGTCCTCTACACCAAC
CGCACCTGCCCTTGGGCTCACCGCGCCCACATTGTTCTCCAGGAGCTCGG
TCTCCCCTTCCAAGAGGTCACCATTGATTTGGATACCCCACGCGAGCCAT
GGTATCTGGAAGTTAACCCGCGTGGTCTCGTTCCCTCCCTCTCCTACAAT
GGTGAAGTGATCACCGAATCCGGCATCGTCGCTCAATTCCTCGCCGACGC
GTACCCCTCCCACCTCGTGCCCCCGTCAAACACTCCCGAGGGAGCTCTGC
AGCGCGCCCGCATCGCCTTCTTTGTCGACACTTACTCCAGCAAAGCTGCC
CCCCACTACAATGCCGCCCTGCGTGGTGCTACCGAAGCCGACCGGAAGGC
CGGCGTTGAGAGCTACGTAGCTGCTATCAAGAAGGAGATCGAGCCCCTCC
TGTACCAGGGACTGGAGGGAAAGCAGCACGGTCCTTTCTTCGGTGGTAGC
GATAAATTGACTTTGGTGGAGGTGCTGCTCGGATCGTTCCTGATCCGTCT
GCACGCCTTCGCGGACAAGGAGGCTGACTTGATCGACCCGGCCATCTGGG
AGGGATTGGCGGAGGCGAAGAACTTCAGCCGTTGGGCGCAGGCGACTCGG
GAGCATCCTAGCGTCAATGGTATCTTTGATGCTAAGGCATGTGCTGACAG
GACGAAGAAGAAGCTCTTGGCGAACAGGAAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_43900ATCC64974_43900Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_43900-T1.exon1ATCC64974_43900-T1.exon1Aspergillus niger N402exon
ATCC64974_43900-T1.exon2ATCC64974_43900-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_43900-T1.cdsATCC64974_43900-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_43900-T1ATCC64974_43900-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000071.3
NoteSMCOG1193:glutathione S-transferase
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR010987
DBxrefInterPro:IPR040079
DBxrefInterPro:IPR004045
DBxrefPFAM:PF13417
DBxrefPFAM:PF13409
DBxrefPFAM:PF02798
DBxrefPFAM:PF00462
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:228799..229577 +
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