You are here

Home

ATCC64974_4400-T1, ATCC64974_4400-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_4400-T1
Unique NameATCC64974_4400-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:1336774..1338292+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_4400-T1 ID=ATCC64974_4400-T1|Name=ATCC64974_4400-T1|organism=Aspergillus niger N402|type=mRNA|length=1519bp|location=Sequence derived from alignment at OGUI01000001.1:1336774..1338292+ (Aspergillus niger N402)
ATGATCCGAACCCTCATCACGCTCGGCCTGTACGGGTTCGTCCAACAGGT
ATCGAGCAAAGATGTGTACCTGGATTGGAATATAACTTGGGTGACTGCAG
CACCGGATGGGTATGCGAGGCCTGTGATCGGCATCAATGGACACTGGCCT
TGTCCTCAGATCGACGTCGATGTTGGCGATAACCTCATCGTCGACGTGTA
CAACGGGCTGGGTAACGAGTCCACCGGAATCCATTGGCATGGTCTCCATC
AGAACTACAATGGGTACATGGACGGTGTCCCAGGAGTCACTCAATGCGAG
CTCCACCCCAACCAGCGGATGCGCTACATTGTTCCGGTAAGCTGACCCTG
CTTGCTGGATCAGTACCTGAACTGCGCCTTCTGACCCATGGATCTAGATC
AACCAAACCGGCACATATTGGTACCACTCCCACGAGCCCGGTCAATATCC
TGATGGGTTGCGCGGACCCATCATCGTGCACGATAATGTTCCTGCGCCGT
ATCACTATGACGAGGAAATGACTCTCACTCTATCAGACTGGTATCATGTA
CAAATACCTGTCTTGCTCGATGAATTCATTGTTCCATCGGACCATGCCCC
CTATGGCGGTCAAGAGCCACTGCCTGATGCGGTTTTGTTCAATGACATGC
ATAACACCAAGATCAGCGTCAAGCCCGGCACGACCTACCTGATCCACGTT
GTTTGCATGGGAAACTTCCCCGGCCATGCACTCGTCATTGACGACCACGA
CATGACCATTGTTGGTATGGATGGCATTGCAGTGGAACCGCATTTTCTTC
CACCCCAGTATCTGCGTGTGGCCGTTGGGCAACGAGTCGACATCCTCCTC
ACCACCAAAAACGATACTAGCAAGAACTATGCGATCTGGGACGGCCTCGA
TATTGACGAAATGTTTGTTCAAGAGGGAAGGAGCCCACCTCAAGGGTACA
ATCCCAACGGCACCGCATGGCTCATGTACAATGAAGATGCTCCTTTGCCT
CCTCCACCAGTGATTCATGTCAACAATGCAAGTCTGGACTTCCTCGACGA
TGTGACCTTGACACCGAGAGACCATCTTCCGTTGATCGACCCAATACAAC
ACCAATTCATCTTCGATGTCTACCCAACCACAGTGGATGGAAAGCCCGCC
TACAGCATCAACAATATGACATATAACGCTCCCGACTCTCCCACGCTGTA
TACTGCCATTTATTCTGACCCTGAGGCTTGCATGGACCCGGACCTTTATG
GGGATGTGAACCCTTTTGTTGTTAATTATGGTGATGTGGTGGAGATTGTT
CTCAACAACCACCATGACAACCTCCACCCGTGGCATCTCCACGGTCATGA
TTTCCAGGTGCTGCAGCGTACCTACCCGTACGGTGGCTTCTTTGATGGCT
ACCGTAACGTTTCGGCGACTCCCATGCGCAGAGATACGCTCATGGTGGAG
CCTCTGGGACATTTCGTGATTAGATTCCGTGCAATGAATCCTGATAAGTA
TTCCCTCGCTGCAGATTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000001.1:1336774..1338292+

>ATCC64974_4400-T1 ID=ATCC64974_4400-T1|Name=ATCC64974_4400-T1|organism=Aspergillus niger N402|type=CDS|length=2916bp|location=Sequence derived from alignment at OGUI01000001.1:1336774..1338292+ (Aspergillus niger N402)
ATGATCCGAACCCTCATCACGCTCGGCCTGTACGGGTTCGTCCAACAGGT
ATCGAGCAAAGATGTGTACCTGGATTGGAATATAACTTGGGTGACTGCAG
CACCGGATGGGTATGCGAGGCCTGTGATCGGCATCAATGGACACTGGCCT
TGTCCTCAGATCGACGTCGATGTTGGCGATAACCTCATCGTCGACGTGTA
CAACGGGCTGGGTAACGAGTCCACCGGAATCCATTGGCATGGTCTCCATC
AGAACTACAATGGGTACATGGACGGTGTCCCAGGAGTCACTCAATGCGAG
CTCCACCCCAACCAGCGGATGCGCTACATTGTTCCGATCAACCAAACCGG
CACATATTGGTACCACTCCCACGAGCCCGGTCAATATCCTGATGGGTTGC
GCGGACCCATCATCGTGCACGATAATGTTCCTGCGCCGTATCACTATGAC
GAGGAAATGACTCTCACTCTATCAGACTGGTATCATGTACAAATACCTGT
CTTGCTCGATGAATTCATTGTTCCATCGGACCATGCCCCCTATGGCGGTC
AAGAGCCACTGCCTGATGCGGTTTTGTTCAATGACATGCATAACACCAAG
ATCAGCGTCAAGCCCGGCACGACCTACCTGATCCACGTTGTTTGCATGGG
AAACTTCCCCGGCCATGCACTCGTCATTGACGACCACGACATGACCATTG
TTGGTATGGATGGCATTGCAGTGGAACCGCATTTTCTTCCACCCCAGTAT
CTGCGTGTGGCCGTTGGGCAACGAGTCGACATCCTCCTCACCACCAAAAA
CGATACTAGCAAGAACTATGCGATCTGGGACGGCCTCGATATTGACGAAA
TGTTTGTTCAAGAGGGAAGGAGCCCACCTCAAGGGTACAATCCCAACGGC
ACCGCATGGCTCATGTACAATGAAGATGCTCCTTTGCCTCCTCCACCAGT
GATTCATGTCAACAATGCAAGTCTGGACTTCCTCGACGATGTGACCTTGA
CACCGAGAGACCATCTTCCGTTGATCGACCCAATACAACACCAATTCATC
TTCGATGTCTACCCAACCACAGTGGATGGAAAGCCCGCCTACAGCATCAA
CAATATGACATATAACGCTCCCGACTCTCCCACGCTGTATACTGCCATTT
ATTCTGACCCTGAGGCTTGCATGGACCCGGACCTTTATGGGGATGTGAAC
CCTTTTGTTGTTAATTATGGTGATGTGGTGGAGATTGTTCTCAACAACCA
CCATGACAACCTCCACCCGTGGCATCTCCACGGTCATGATTTCCAGGTGC
TGCAGCGTACCTACCCGTACGGTGGCTTCTTTGATGGCTACCGTAACGTT
TCGGCGACTCCCATGCGCAGAGATACGCTCATGGTGGAGCCTCTGGGACA
TTTCGTGATTAGATTCCGTGCAATGAATCCTGATAAGTATTCCCTCGCTG
CAGATTAGATGATCCGAACCCTCATCACGCTCGGCCTGTACGGGTTCGTC
CAACAGGTATCGAGCAAAGATGTGTACCTGGATTGGAATATAACTTGGGT
GACTGCAGCACCGGATGGGTATGCGAGGCCTGTGATCGGCATCAATGGAC
ACTGGCCTTGTCCTCAGATCGACGTCGATGTTGGCGATAACCTCATCGTC
GACGTGTACAACGGGCTGGGTAACGAGTCCACCGGAATCCATTGGCATGG
TCTCCATCAGAACTACAATGGGTACATGGACGGTGTCCCAGGAGTCACTC
AATGCGAGCTCCACCCCAACCAGCGGATGCGCTACATTGTTCCGATCAAC
CAAACCGGCACATATTGGTACCACTCCCACGAGCCCGGTCAATATCCTGA
TGGGTTGCGCGGACCCATCATCGTGCACGATAATGTTCCTGCGCCGTATC
ACTATGACGAGGAAATGACTCTCACTCTATCAGACTGGTATCATGTACAA
ATACCTGTCTTGCTCGATGAATTCATTGTTCCATCGGACCATGCCCCCTA
TGGCGGTCAAGAGCCACTGCCTGATGCGGTTTTGTTCAATGACATGCATA
ACACCAAGATCAGCGTCAAGCCCGGCACGACCTACCTGATCCACGTTGTT
TGCATGGGAAACTTCCCCGGCCATGCACTCGTCATTGACGACCACGACAT
GACCATTGTTGGTATGGATGGCATTGCAGTGGAACCGCATTTTCTTCCAC
CCCAGTATCTGCGTGTGGCCGTTGGGCAACGAGTCGACATCCTCCTCACC
ACCAAAAACGATACTAGCAAGAACTATGCGATCTGGGACGGCCTCGATAT
TGACGAAATGTTTGTTCAAGAGGGAAGGAGCCCACCTCAAGGGTACAATC
CCAACGGCACCGCATGGCTCATGTACAATGAAGATGCTCCTTTGCCTCCT
CCACCAGTGATTCATGTCAACAATGCAAGTCTGGACTTCCTCGACGATGT
GACCTTGACACCGAGAGACCATCTTCCGTTGATCGACCCAATACAACACC
AATTCATCTTCGATGTCTACCCAACCACAGTGGATGGAAAGCCCGCCTAC
AGCATCAACAATATGACATATAACGCTCCCGACTCTCCCACGCTGTATAC
TGCCATTTATTCTGACCCTGAGGCTTGCATGGACCCGGACCTTTATGGGG
ATGTGAACCCTTTTGTTGTTAATTATGGTGATGTGGTGGAGATTGTTCTC
AACAACCACCATGACAACCTCCACCCGTGGCATCTCCACGGTCATGATTT
CCAGGTGCTGCAGCGTACCTACCCGTACGGTGGCTTCTTTGATGGCTACC
GTAACGTTTCGGCGACTCCCATGCGCAGAGATACGCTCATGGTGGAGCCT
CTGGGACATTTCGTGATTAGATTCCGTGCAATGAATCCTGATAAGTATTC
CCTCGCTGCAGATTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0005507copper ion binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_4400ATCC64974_4400Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_4400-T1.exon1ATCC64974_4400-T1.exon1Aspergillus niger N402exon
ATCC64974_4400-T1.exon2ATCC64974_4400-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_4400-T1.cdsATCC64974_4400-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_4400-T1ATCC64974_4400-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteCAZy:AA1_1
NoteCAZy:AA1_3
NoteCAZy:AA1_2
DBxrefInterPro:IPR033138
DBxrefInterPro:IPR011707
DBxrefInterPro:IPR001117
DBxrefInterPro:IPR011706
DBxrefInterPro:IPR008972
DBxrefPFAM:PF07732
DBxrefPFAM:PF07731
DBxrefPFAM:PF00394
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:1336774..1338292 +
Powered by Drupal