You are here

Home

ATCC64974_44070-T1, ATCC64974_44070-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_44070-T1
Unique NameATCC64974_44070-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:276670..277894-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_44070-T1 ID=ATCC64974_44070-T1|Name=ATCC64974_44070-T1|organism=Aspergillus niger N402|type=mRNA|length=1225bp|location=Sequence derived from alignment at OGUI01000007.1:276670..277894- (Aspergillus niger N402)
ATGGCTCCTTCAGGAATCAATCAGGTCCGTTTCTTTATTATATCTGCACA
TAGACTCGCTTACTGACGTCCTCGGTCGGTGTCTGTACAGGCTTTCGTTT
TACACCCCGGGGGCAGATTCGATTATGAAGAGCGTGTTATACCTAATCTT
CAGACGGACCGCGACGTCATCGTCCAGGTTATCGTGACTGGCCTTTGTGG
CTCCGATGTAAGGCTTTACTTCCATTCATCGTTTTCCTTTCAGCTTGGGC
CACAGCTTACCATCGACCTAGATCCACTATTGGCAGCATGGCCGCATAGG
GCGGTATGTGGTCGAAGCCCCCATTGTCCTTGGCCATGAATCCGCCGGCA
TTGTGGTGGAATGCGCGAGTAAATCGGGTTTCGCTATCGGTGATCGCGTA
GCCCTGGAGCCAGGCATTGCCTGCAATACCTGCCATCATTGCCGCGCGGG
GAGATATAACCTCTGTAGCGCGATGCGTTTTGCTGCCACACCACCCTATG
ATGGGACACTGGCGACCTACTACCGTCTTCCTGCAGAATGCTGCTACAAG
CTGCCAGCACATGTATCCCTGCAACACGGAGCACTGGTCGAACCGCTCAG
TGTGGCAGTGCACAGCTGTCGACTGGCAGGAGATATGCAGCAAAAGTCGG
TCGTCGTCTTTGGCGCTGGCCCAGTCGGTTTGCTCTGCGCATCCGTTTCC
CGCGCATTCGGTGCATCGACAGTTGTGGTTGTTGACATTAACTCCGACCG
ACTTAGCGTGGCACAAAAGTACGGAGCCACGCACACGTATAAAATGAGCA
ACGAATCCCCGGAACACAATGCTGCCAGAATTTTGGAAGAAATGGAGCTG
GACAATGGGGCCCACATTGTTTTGGATGCCACCGGCGCCGAGCCTTGTAT
GAACTGTGGCATTTCAGTTCTTGCGTCGGGTGGAACATTTGTGCAAGTCG
GCTTGGGCAATCCGAATCCCTCACTGCCGGTCGGTCAAATCTGTGATAAA
GAGGCCATTTTCAGGGGGAGTTTTCGGTATGGTCCAGGAGATTATCGAAC
AGCAATTGGGCTGCTGTCGTCGGGTCGCGTTGTTTTAGAGGGTTTAGTTA
CCCACGAGTTCCCTTTCACGCAGGCGGAAGAGGCATTCAAGAACGTCGGC
AACCGACAGGGTATCAAGACTGTCATCTATGGACCTGGGGCAGATGAAAA
CGCAGCGAAAGCAACCTTGACCTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:276670..277894-

>ATCC64974_44070-T1 ID=ATCC64974_44070-T1|Name=ATCC64974_44070-T1|organism=Aspergillus niger N402|type=CDS|length=3285bp|location=Sequence derived from alignment at OGUI01000007.1:276670..277894- (Aspergillus niger N402)
ATCCACTATTGGCAGCATGGCCGCATAGGGCGGTATGTGGTCGAAGCCCC
CATTGTCCTTGGCCATGAATCCGCCGGCATTGTGGTGGAATGCGCGAGTA
AATCGGGTTTCGCTATCGGTGATCGCGTAGCCCTGGAGCCAGGCATTGCC
TGCAATACCTGCCATCATTGCCGCGCGGGGAGATATAACCTCTGTAGCGC
GATGCGTTTTGCTGCCACACCACCCTATGATGGGACACTGGCGACCTACT
ACCGTCTTCCTGCAGAATGCTGCTACAAGCTGCCAGCACATGTATCCCTG
CAACACGGAGCACTGGTCGAACCGCTCAGTGTGGCAGTGCACAGCTGTCG
ACTGGCAGGAGATATGCAGCAAAAGTCGGTCGTCGTCTTTGGCGCTGGCC
CAGTCGGTTTGCTCTGCGCATCCGTTTCCCGCGCATTCGGTGCATCGACA
GTTGTGGTTGTTGACATTAACTCCGACCGACTTAGCGTGGCACAAAAGTA
CGGAGCCACGCACACGTATAAAATGAGCAACGAATCCCCGGAACACAATG
CTGCCAGAATTTTGGAAGAAATGGAGCTGGACAATGGGGCCCACATTGTT
TTGGATGCCACCGGCGCCGAGCCTTGTATGAACTGTGGCATTTCAGTTCT
TGCGTCGGGTGGAACATTTGTGCAAGTCGGCTTGGGCAATCCGAATCCCT
CACTGCCGGTCGGTCAAATCTGTGATAAAGAGGCCATTTTCAGGGGGAGT
TTTCGGTATGGTCCAGGAGATTATCGAACAGCAATTGGGCTGCTGTCGTC
GGGTCGCGTTGTTTTAGAGGGTTTAGTTACCCACGAGTTCCCTTTCACGC
AGGCGGAAGAGGCATTCAAGAACGTCGGCAACCGACAGGGTATCAAGACT
GTCATCTATGGACCTGGGGCAGATGAAAACGCAGCGAAAGCAACCTTGAC
CTAAGCTTTCGTTTTACACCCCGGGGGCAGATTCGATTATGAAGAGCGTG
TTATACCTAATCTTCAGACGGACCGCGACGTCATCGTCCAGGTTATCGTG
ACTGGCCTTTGTGGCTCCGATATGGCTCCTTCAGGAATCAATCAGATCCA
CTATTGGCAGCATGGCCGCATAGGGCGGTATGTGGTCGAAGCCCCCATTG
TCCTTGGCCATGAATCCGCCGGCATTGTGGTGGAATGCGCGAGTAAATCG
GGTTTCGCTATCGGTGATCGCGTAGCCCTGGAGCCAGGCATTGCCTGCAA
TACCTGCCATCATTGCCGCGCGGGGAGATATAACCTCTGTAGCGCGATGC
GTTTTGCTGCCACACCACCCTATGATGGGACACTGGCGACCTACTACCGT
CTTCCTGCAGAATGCTGCTACAAGCTGCCAGCACATGTATCCCTGCAACA
CGGAGCACTGGTCGAACCGCTCAGTGTGGCAGTGCACAGCTGTCGACTGG
CAGGAGATATGCAGCAAAAGTCGGTCGTCGTCTTTGGCGCTGGCCCAGTC
GGTTTGCTCTGCGCATCCGTTTCCCGCGCATTCGGTGCATCGACAGTTGT
GGTTGTTGACATTAACTCCGACCGACTTAGCGTGGCACAAAAGTACGGAG
CCACGCACACGTATAAAATGAGCAACGAATCCCCGGAACACAATGCTGCC
AGAATTTTGGAAGAAATGGAGCTGGACAATGGGGCCCACATTGTTTTGGA
TGCCACCGGCGCCGAGCCTTGTATGAACTGTGGCATTTCAGTTCTTGCGT
CGGGTGGAACATTTGTGCAAGTCGGCTTGGGCAATCCGAATCCCTCACTG
CCGGTCGGTCAAATCTGTGATAAAGAGGCCATTTTCAGGGGGAGTTTTCG
GTATGGTCCAGGAGATTATCGAACAGCAATTGGGCTGCTGTCGTCGGGTC
GCGTTGTTTTAGAGGGTTTAGTTACCCACGAGTTCCCTTTCACGCAGGCG
GAAGAGGCATTCAAGAACGTCGGCAACCGACAGGGTATCAAGACTGTCAT
CTATGGACCTGGGGCAGATGAAAACGCAGCGAAAGCAACCTTGACCTAAG
CTTTCGTTTTACACCCCGGGGGCAGATTCGATTATGAAGAGCGTGTTATA
CCTAATCTTCAGACGGACCGCGACGTCATCGTCCAGGTTATCGTGACTGG
CCTTTGTGGCTCCGATATGGCTCCTTCAGGAATCAATCAGATCCACTATT
GGCAGCATGGCCGCATAGGGCGGTATGTGGTCGAAGCCCCCATTGTCCTT
GGCCATGAATCCGCCGGCATTGTGGTGGAATGCGCGAGTAAATCGGGTTT
CGCTATCGGTGATCGCGTAGCCCTGGAGCCAGGCATTGCCTGCAATACCT
GCCATCATTGCCGCGCGGGGAGATATAACCTCTGTAGCGCGATGCGTTTT
GCTGCCACACCACCCTATGATGGGACACTGGCGACCTACTACCGTCTTCC
TGCAGAATGCTGCTACAAGCTGCCAGCACATGTATCCCTGCAACACGGAG
CACTGGTCGAACCGCTCAGTGTGGCAGTGCACAGCTGTCGACTGGCAGGA
GATATGCAGCAAAAGTCGGTCGTCGTCTTTGGCGCTGGCCCAGTCGGTTT
GCTCTGCGCATCCGTTTCCCGCGCATTCGGTGCATCGACAGTTGTGGTTG
TTGACATTAACTCCGACCGACTTAGCGTGGCACAAAAGTACGGAGCCACG
CACACGTATAAAATGAGCAACGAATCCCCGGAACACAATGCTGCCAGAAT
TTTGGAAGAAATGGAGCTGGACAATGGGGCCCACATTGTTTTGGATGCCA
CCGGCGCCGAGCCTTGTATGAACTGTGGCATTTCAGTTCTTGCGTCGGGT
GGAACATTTGTGCAAGTCGGCTTGGGCAATCCGAATCCCTCACTGCCGGT
CGGTCAAATCTGTGATAAAGAGGCCATTTTCAGGGGGAGTTTTCGGTATG
GTCCAGGAGATTATCGAACAGCAATTGGGCTGCTGTCGTCGGGTCGCGTT
GTTTTAGAGGGTTTAGTTACCCACGAGTTCCCTTTCACGCAGGCGGAAGA
GGCATTCAAGAACGTCGGCAACCGACAGGGTATCAAGACTGTCATCTATG
GACCTGGGGCAGATGAAAACGCAGCGAAAGCAACCTTGACCTAAGCTTTC
GTTTTACACCCCGGGGGCAGATTCGATTATGAAGAGCGTGTTATACCTAA
TCTTCAGACGGACCGCGACGTCATCGTCCAGGTTATCGTGACTGGCCTTT
GTGGCTCCGATATGGCTCCTTCAGGAATCAATCAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_44070ATCC64974_44070Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_44070-T1ATCC64974_44070-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_44070-T1.cdsATCC64974_44070-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_44070-T1.exon3ATCC64974_44070-T1.exon3Aspergillus niger N402exon
ATCC64974_44070-T1.exon2ATCC64974_44070-T1.exon2Aspergillus niger N402exon
ATCC64974_44070-T1.exon1ATCC64974_44070-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR011032
DBxrefInterPro:IPR002328
DBxrefInterPro:IPR013154
DBxrefInterPro:IPR013149
DBxrefInterPro:IPR020843
DBxrefPFAM:PF16912
DBxrefPFAM:PF00107
DBxrefPFAM:PF08240
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:276670..277894 -
Powered by Drupal