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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000007.1:326371..326786- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_44290-T1 ID=ATCC64974_44290-T1|Name=ATCC64974_44290-T1|organism=Aspergillus niger N402|type=mRNA|length=416bp|location=Sequence derived from alignment at OGUI01000007.1:326371..326786- (Aspergillus niger N402) ATGACCGGTCGTGGAGGCGGTGGAGCCGCTCGCAAGACCCTGCTTGCGCC
GATTCATTTCATCTTCAAGCTCCTTCAGCAACGGTCTACAGTCTCTATCT
GGCTTTACGAGCAGCTTGCTTTCCGCATAGAGGGAAAAATCAGGGTAAAT
GGATTTCTGGCGACTTGGTTGCGTGACATTTGACTAATCGACTCGTGTAG
GGTTTTGACGAGTTCATGAACCTTGTCATTGACGATGCAGTGGAGGTTCG
CATGGCTACAAAGTCCGAAGAAGAGAAGCGGAGACCTCTAGGTATGCGGC
AGTTCAAGCTCTTGTTCATTCCCCTGGGCGCTGCAATACTGATTATATTC
TTGAACAACCTAGGCCAAATACTGCTCAAGGGCGATAACGTGTCTCTTAT
TCAAGCCGTGCAGTGA back to topCoding sequence (CDS) from alignment at OGUI01000007.1:326371..326786- >ATCC64974_44290-T1 ID=ATCC64974_44290-T1|Name=ATCC64974_44290-T1|organism=Aspergillus niger N402|type=CDS|length=864bp|location=Sequence derived from alignment at OGUI01000007.1:326371..326786- (Aspergillus niger N402) GCCAAATACTGCTCAAGGGCGATAACGTGTCTCTTATTCAAGCCGTGCAG TGAGGTTTTGACGAGTTCATGAACCTTGTCATTGACGATGCAGTGGAGGT TCGCATGGCTACAAAGTCCGAAGAAGAGAAGCGGAGACCTCTAGATGACC GGTCGTGGAGGCGGTGGAGCCGCTCGCAAGACCCTGCTTGCGCCGATTCA TTTCATCTTCAAGCTCCTTCAGCAACGGTCTACAGTCTCTATCTGGCTTT ACGAGCAGCTTGCTTTCCGCATAGAGGGAAAAATCAGGGCCAAATACTGC TCAAGGGCGATAACGTGTCTCTTATTCAAGCCGTGCAGTGAGGTTTTGAC GAGTTCATGAACCTTGTCATTGACGATGCAGTGGAGGTTCGCATGGCTAC AAAGTCCGAAGAAGAGAAGCGGAGACCTCTAGATGACCGGTCGTGGAGGC GGTGGAGCCGCTCGCAAGACCCTGCTTGCGCCGATTCATTTCATCTTCAA GCTCCTTCAGCAACGGTCTACAGTCTCTATCTGGCTTTACGAGCAGCTTG CTTTCCGCATAGAGGGAAAAATCAGGGCCAAATACTGCTCAAGGGCGATA ACGTGTCTCTTATTCAAGCCGTGCAGTGAGGTTTTGACGAGTTCATGAAC CTTGTCATTGACGATGCAGTGGAGGTTCGCATGGCTACAAAGTCCGAAGA AGAGAAGCGGAGACCTCTAGATGACCGGTCGTGGAGGCGGTGGAGCCGCT CGCAAGACCCTGCTTGCGCCGATTCATTTCATCTTCAAGCTCCTTCAGCA ACGGTCTACAGTCTCTATCTGGCTTTACGAGCAGCTTGCTTTCCGCATAG AGGGAAAAATCAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005681 | spliceosomal complex |
Vocabulary: Biological Process
Term | Definition |
GO:0000398 | mRNA splicing, via spliceosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
ATCC64974_44290-T1 | ATCC64974_44290-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | BUSCO:EOG09265NHW |
DBxref | InterPro:IPR010920 |
DBxref | InterPro:IPR027078 |
DBxref | InterPro:IPR001163 |
DBxref | PFAM:PF01423 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
OGUI01000007.1 | supercontig | OGUI01000007.1:326371..326786 - |
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