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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000007.1:335641..338779+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_44310-T1 ID=ATCC64974_44310-T1|Name=ATCC64974_44310-T1|organism=Aspergillus niger N402|type=mRNA|length=3139bp|location=Sequence derived from alignment at OGUI01000007.1:335641..338779+ (Aspergillus niger N402)
ATGACCTTGGCTCTGGCTACAATGACTCCGCTGGGTTCGGGGCCTAAACG
CGATCATACATCGAGCACAGAGATTGACATGATGACGGAAGCTGATGCGC
TCCATGCGGCTATTAATGGACCCCCACGCAAAAGGAAAAGGACCCGAAAG
GTTCAGACAGATCGCAAGTTTGAATGCACATTTGAGGGGTGCGGCAAGAG
TTACTCACGAGCGGAGCATCTGTACCGCCACCAACTGAACCGTACGCATG
CAATCCTTCCAAGAGCTTGTGAGCAAGTACTAACTGGCTGCTGCTCTAGA
TACCCCCAAGCAGATTTATCGGTGCGACTTTCCTGATTGTTACCGCTCGT
TCGTGCGACAAGACCTATGTATCCGTCATAGAGAACGCCACACCACCCAG
GGATCGCAGCTACAGAAGCGCGATCACTTTGCGCAGGCTGCAGCAACCAG
CAACAACCTGAAAAAGCCGCAAGTCTCTCAAGTCATGTCACAAGTGAACG
CGAACCACGCACCTACACTCATTCCGCTACCCTCCAATTATTCGCCCGTT
CAAGCCCCATCCGAGGGTCAGACAATGACAGTGCCTGCGATGAGTGCATC
GAATCAACACGTACACATGCCCTCGCCCTCAGGATCTGTGGGCATTGGCC
AGGGATTTAATTATCAGACTATGGTGTCCCATCATGCAGTGGACCTGTCT
GACCCTACGTTTTCCCGATCGAACAGTTCCAGTAATCATACACTCAGCTC
CCCCCCAGGACAGTCAAGCACAACAACCTTTAGTCCTCCTGAGATACAGG
CGGTGCCTCATACGGCGCTCGGTGGTCACTCTGCTGGCAAATCGTCCCCC
AATTCAGGAGACTTGAGCCACGAAGTTCGATCTCACCACTCCCTGGCCGA
AACATCTTCAATAACACACGATATCGATGGCCCTTCATTGGCTCATCCCG
CATCCTATTCAGGCCTACAAATCCCTGTGGGGGGATACACAAATATATCG
ATGGCTCCAGCGACGTCGGCTTCGACGTCTCTGGACCGCGGAACACTAGA
GTCGATGTCAGAAATGATGACATCCGGCCCGTCAGTGGGAGATGCCGGCT
TCGACGCCTTGGCTTCTTGTGTCTACCCGGTGTTTGGTGGCGAAGCCCAC
AACCGGTCACCCTTCGCAATGGCGGATGATTTCACAGCATGGCTGTTTAA
CGATCCCGTTACAGGCTCTCCGTCTATGGGGTATCCTGCTCCCACTAACG
TTGTGCCAAATTACTTGGACGCTGTCCAACTACAGAACCAATTTTTCATG
AGTGATCCGGCGTATGGCAGCTTTCTCAGTGGTGTGATTCCGCATCATCC
CATGAGTGTTACAAGCATCCTGGATCCGGGATCACCGCGTGCCATCATGT
CAGAGGAGAAGAGACAAGAACTTCTTGCCCTCATGAGCTCGAGGTTTAAT
GAGGCCTTCTATGCAGTGTCTGCTAAGCGCAAGGATGCGCTGATGGACGG
TGACATTGACGACGATGACCATGTGCTAAGTCTACGCATGATGCAGATGT
ACATCGGCTCGTATTGGTACCATTTCCACTCTCAGTTGCCCATTCTACAC
CGTCCAACATTCGAGGCAGACAAAGCGCCTAATCTTCTTCTGCTCGCAGT
GATGGCTATTGGCGCATCCACGCTGGATAGAATTCACGGGTCAGAAGTAA
CCGAGGCAGCAGCGGAGTTGGCGAACTTTATCGCCTGGCATCTCCGAACG
GAGCTTTTCATGGATGCAGACTTTCGTCCACCAGCTAAGCTCTGGATTTT
CCAAGCGCTCCTGCTGCTGGAGGTATATGAAAAGATGTACTCCACTCGTG
CGCTCCATGAGCGGGCGCATATCCATCACGACACCACACTTACACTGATG
CGACGGGGCAGTTCATTGATTGGCCGCTCTGCATTAGACTCTCCTGCAAG
CTTGCGCGATGATCGGCAGGCCCGGTCAGCTTCTGGATCGACACTGGCGC
CAGACTTTGTGGCTGAAGAGTCATGGACACACTGGATCAAGGCTGAGGCC
ACGAGGCGAGTGGCTTTTGCGGCTTTCGTTCTGGACTCTACCCACGCCAC
TATGTTCGGACATTCGGCTAAGATGGTTGCTCACGAGCTTCGGTTACCGT
TGCCCTGTGATGAGGCGCTGTGGTCTGCGACTAGTGCCTCTGAGGTAGCT
CGAGTGCAATCGAGCCTGCATGCCAACGGAGTCAAGCCTGTCATGTTTTT
GGACGGCCTTAAGAAGACGCTTAACGGACAGCGGGTCCGGACAAATGCTT
TTGGACGAACCATTCTTATGGCTGGCTTGCTTAGCGTCAGTTGGCACATG
AATCAACGAGACCTACAGGTGAGCTCACTGGGTGGGCCACCGGCATTGGG
AGGCCGGGACAAATGGCGGTCAGCACTGTTGCGAGCCTATGATAATTGGC
GACGAGACTTTGATGAAGCGCTGGGCCAGTCACCATCGGGGCCATTTCAT
GGTGGATACCGTACCCGACATCCTCTAGACGACGATAATGTTTTTGAGTC
GCGCGACGTCCTCCATGGATTGGCGCATATGGCTTCTCACGTTGATATTG
TCGACTGTCAAATCTTCGCTGGAGCTGGTCGGCTCATGGGACGGTCTATC
ACCCCCAGAGACTACAAAGCGGCGCGCGAAAAGATGGTTGATCGCTGGGC
CACCAAGGCTACAGCCCGCGACGCCACGTTCTATGCTTTGAAGTTCTTAT
CGGAGTGCCTTCTGGATGAGAAACGAGCACTGAACGAGGATGGGGAACTG
TATTCGGGTCGAGACGATTACCTCTTGAACCGGCCCTGGGTGCTGTATGT
TGCGGCTCTAGTGGTCTGGTGCTATGGATATGCACTTGAAGGGCCCTTGA
AGACTCCTGTCAAGTTGAGCACCCCTGCTGCACAGCGGCAGGACATGCAG
GAGTTCCTGCGCCGGGTGGGCGGCGTTCGTGAGCCCAGCGACTTGGAAGG
GATGCAAGGATGCAACCGCTGTCTGGGCTTGTTATTGATCCTCCGGGACG
GGTTCGCCAACACGCGCTGGGAGTTATTGGCCGAAGCTGCCAATCTGCTC
ACCAGTTGTATCGACAAGCTGAATGGAGCAGCTTGCTGA back to topCoding sequence (CDS) from alignment at OGUI01000007.1:335641..338779+ >ATCC64974_44310-T1 ID=ATCC64974_44310-T1|Name=ATCC64974_44310-T1|organism=Aspergillus niger N402|type=CDS|length=6162bp|location=Sequence derived from alignment at OGUI01000007.1:335641..338779+ (Aspergillus niger N402)
ATGACCTTGGCTCTGGCTACAATGACTCCGCTGGGTTCGGGGCCTAAACG
CGATCATACATCGAGCACAGAGATTGACATGATGACGGAAGCTGATGCGC
TCCATGCGGCTATTAATGGACCCCCACGCAAAAGGAAAAGGACCCGAAAG
GTTCAGACAGATCGCAAGTTTGAATGCACATTTGAGGGGTGCGGCAAGAG
TTACTCACGAGCGGAGCATCTGTACCGCCACCAACTGAACCATACCCCCA
AGCAGATTTATCGGTGCGACTTTCCTGATTGTTACCGCTCGTTCGTGCGA
CAAGACCTATGTATCCGTCATAGAGAACGCCACACCACCCAGGGATCGCA
GCTACAGAAGCGCGATCACTTTGCGCAGGCTGCAGCAACCAGCAACAACC
TGAAAAAGCCGCAAGTCTCTCAAGTCATGTCACAAGTGAACGCGAACCAC
GCACCTACACTCATTCCGCTACCCTCCAATTATTCGCCCGTTCAAGCCCC
ATCCGAGGGTCAGACAATGACAGTGCCTGCGATGAGTGCATCGAATCAAC
ACGTACACATGCCCTCGCCCTCAGGATCTGTGGGCATTGGCCAGGGATTT
AATTATCAGACTATGGTGTCCCATCATGCAGTGGACCTGTCTGACCCTAC
GTTTTCCCGATCGAACAGTTCCAGTAATCATACACTCAGCTCCCCCCCAG
GACAGTCAAGCACAACAACCTTTAGTCCTCCTGAGATACAGGCGGTGCCT
CATACGGCGCTCGGTGGTCACTCTGCTGGCAAATCGTCCCCCAATTCAGG
AGACTTGAGCCACGAAGTTCGATCTCACCACTCCCTGGCCGAAACATCTT
CAATAACACACGATATCGATGGCCCTTCATTGGCTCATCCCGCATCCTAT
TCAGGCCTACAAATCCCTGTGGGGGGATACACAAATATATCGATGGCTCC
AGCGACGTCGGCTTCGACGTCTCTGGACCGCGGAACACTAGAGTCGATGT
CAGAAATGATGACATCCGGCCCGTCAGTGGGAGATGCCGGCTTCGACGCC
TTGGCTTCTTGTGTCTACCCGGTGTTTGGTGGCGAAGCCCACAACCGGTC
ACCCTTCGCAATGGCGGATGATTTCACAGCATGGCTGTTTAACGATCCCG
TTACAGGCTCTCCGTCTATGGGGTATCCTGCTCCCACTAACGTTGTGCCA
AATTACTTGGACGCTGTCCAACTACAGAACCAATTTTTCATGAGTGATCC
GGCGTATGGCAGCTTTCTCAGTGGTGTGATTCCGCATCATCCCATGAGTG
TTACAAGCATCCTGGATCCGGGATCACCGCGTGCCATCATGTCAGAGGAG
AAGAGACAAGAACTTCTTGCCCTCATGAGCTCGAGGTTTAATGAGGCCTT
CTATGCAGTGTCTGCTAAGCGCAAGGATGCGCTGATGGACGGTGACATTG
ACGACGATGACCATGTGCTAAGTCTACGCATGATGCAGATGTACATCGGC
TCGTATTGGTACCATTTCCACTCTCAGTTGCCCATTCTACACCGTCCAAC
ATTCGAGGCAGACAAAGCGCCTAATCTTCTTCTGCTCGCAGTGATGGCTA
TTGGCGCATCCACGCTGGATAGAATTCACGGGTCAGAAGTAACCGAGGCA
GCAGCGGAGTTGGCGAACTTTATCGCCTGGCATCTCCGAACGGAGCTTTT
CATGGATGCAGACTTTCGTCCACCAGCTAAGCTCTGGATTTTCCAAGCGC
TCCTGCTGCTGGAGGTATATGAAAAGATGTACTCCACTCGTGCGCTCCAT
GAGCGGGCGCATATCCATCACGACACCACACTTACACTGATGCGACGGGG
CAGTTCATTGATTGGCCGCTCTGCATTAGACTCTCCTGCAAGCTTGCGCG
ATGATCGGCAGGCCCGGTCAGCTTCTGGATCGACACTGGCGCCAGACTTT
GTGGCTGAAGAGTCATGGACACACTGGATCAAGGCTGAGGCCACGAGGCG
AGTGGCTTTTGCGGCTTTCGTTCTGGACTCTACCCACGCCACTATGTTCG
GACATTCGGCTAAGATGGTTGCTCACGAGCTTCGGTTACCGTTGCCCTGT
GATGAGGCGCTGTGGTCTGCGACTAGTGCCTCTGAGGTAGCTCGAGTGCA
ATCGAGCCTGCATGCCAACGGAGTCAAGCCTGTCATGTTTTTGGACGGCC
TTAAGAAGACGCTTAACGGACAGCGGGTCCGGACAAATGCTTTTGGACGA
ACCATTCTTATGGCTGGCTTGCTTAGCGTCAGTTGGCACATGAATCAACG
AGACCTACAGGTGAGCTCACTGGGTGGGCCACCGGCATTGGGAGGCCGGG
ACAAATGGCGGTCAGCACTGTTGCGAGCCTATGATAATTGGCGACGAGAC
TTTGATGAAGCGCTGGGCCAGTCACCATCGGGGCCATTTCATGGTGGATA
CCGTACCCGACATCCTCTAGACGACGATAATGTTTTTGAGTCGCGCGACG
TCCTCCATGGATTGGCGCATATGGCTTCTCACGTTGATATTGTCGACTGT
CAAATCTTCGCTGGAGCTGGTCGGCTCATGGGACGGTCTATCACCCCCAG
AGACTACAAAGCGGCGCGCGAAAAGATGGTTGATCGCTGGGCCACCAAGG
CTACAGCCCGCGACGCCACGTTCTATGCTTTGAAGTTCTTATCGGAGTGC
CTTCTGGATGAGAAACGAGCACTGAACGAGGATGGGGAACTGTATTCGGG
TCGAGACGATTACCTCTTGAACCGGCCCTGGGTGCTGTATGTTGCGGCTC
TAGTGGTCTGGTGCTATGGATATGCACTTGAAGGGCCCTTGAAGACTCCT
GTCAAGTTGAGCACCCCTGCTGCACAGCGGCAGGACATGCAGGAGTTCCT
GCGCCGGGTGGGCGGCGTTCGTGAGCCCAGCGACTTGGAAGGGATGCAAG
GATGCAACCGCTGTCTGGGCTTGTTATTGATCCTCCGGGACGGGTTCGCC
AACACGCGCTGGGAGTTATTGGCCGAAGCTGCCAATCTGCTCACCAGTTG
TATCGACAAGCTGAATGGAGCAGCTTGCTGAATGACCTTGGCTCTGGCTA
CAATGACTCCGCTGGGTTCGGGGCCTAAACGCGATCATACATCGAGCACA
GAGATTGACATGATGACGGAAGCTGATGCGCTCCATGCGGCTATTAATGG
ACCCCCACGCAAAAGGAAAAGGACCCGAAAGGTTCAGACAGATCGCAAGT
TTGAATGCACATTTGAGGGGTGCGGCAAGAGTTACTCACGAGCGGAGCAT
CTGTACCGCCACCAACTGAACCATACCCCCAAGCAGATTTATCGGTGCGA
CTTTCCTGATTGTTACCGCTCGTTCGTGCGACAAGACCTATGTATCCGTC
ATAGAGAACGCCACACCACCCAGGGATCGCAGCTACAGAAGCGCGATCAC
TTTGCGCAGGCTGCAGCAACCAGCAACAACCTGAAAAAGCCGCAAGTCTC
TCAAGTCATGTCACAAGTGAACGCGAACCACGCACCTACACTCATTCCGC
TACCCTCCAATTATTCGCCCGTTCAAGCCCCATCCGAGGGTCAGACAATG
ACAGTGCCTGCGATGAGTGCATCGAATCAACACGTACACATGCCCTCGCC
CTCAGGATCTGTGGGCATTGGCCAGGGATTTAATTATCAGACTATGGTGT
CCCATCATGCAGTGGACCTGTCTGACCCTACGTTTTCCCGATCGAACAGT
TCCAGTAATCATACACTCAGCTCCCCCCCAGGACAGTCAAGCACAACAAC
CTTTAGTCCTCCTGAGATACAGGCGGTGCCTCATACGGCGCTCGGTGGTC
ACTCTGCTGGCAAATCGTCCCCCAATTCAGGAGACTTGAGCCACGAAGTT
CGATCTCACCACTCCCTGGCCGAAACATCTTCAATAACACACGATATCGA
TGGCCCTTCATTGGCTCATCCCGCATCCTATTCAGGCCTACAAATCCCTG
TGGGGGGATACACAAATATATCGATGGCTCCAGCGACGTCGGCTTCGACG
TCTCTGGACCGCGGAACACTAGAGTCGATGTCAGAAATGATGACATCCGG
CCCGTCAGTGGGAGATGCCGGCTTCGACGCCTTGGCTTCTTGTGTCTACC
CGGTGTTTGGTGGCGAAGCCCACAACCGGTCACCCTTCGCAATGGCGGAT
GATTTCACAGCATGGCTGTTTAACGATCCCGTTACAGGCTCTCCGTCTAT
GGGGTATCCTGCTCCCACTAACGTTGTGCCAAATTACTTGGACGCTGTCC
AACTACAGAACCAATTTTTCATGAGTGATCCGGCGTATGGCAGCTTTCTC
AGTGGTGTGATTCCGCATCATCCCATGAGTGTTACAAGCATCCTGGATCC
GGGATCACCGCGTGCCATCATGTCAGAGGAGAAGAGACAAGAACTTCTTG
CCCTCATGAGCTCGAGGTTTAATGAGGCCTTCTATGCAGTGTCTGCTAAG
CGCAAGGATGCGCTGATGGACGGTGACATTGACGACGATGACCATGTGCT
AAGTCTACGCATGATGCAGATGTACATCGGCTCGTATTGGTACCATTTCC
ACTCTCAGTTGCCCATTCTACACCGTCCAACATTCGAGGCAGACAAAGCG
CCTAATCTTCTTCTGCTCGCAGTGATGGCTATTGGCGCATCCACGCTGGA
TAGAATTCACGGGTCAGAAGTAACCGAGGCAGCAGCGGAGTTGGCGAACT
TTATCGCCTGGCATCTCCGAACGGAGCTTTTCATGGATGCAGACTTTCGT
CCACCAGCTAAGCTCTGGATTTTCCAAGCGCTCCTGCTGCTGGAGGTATA
TGAAAAGATGTACTCCACTCGTGCGCTCCATGAGCGGGCGCATATCCATC
ACGACACCACACTTACACTGATGCGACGGGGCAGTTCATTGATTGGCCGC
TCTGCATTAGACTCTCCTGCAAGCTTGCGCGATGATCGGCAGGCCCGGTC
AGCTTCTGGATCGACACTGGCGCCAGACTTTGTGGCTGAAGAGTCATGGA
CACACTGGATCAAGGCTGAGGCCACGAGGCGAGTGGCTTTTGCGGCTTTC
GTTCTGGACTCTACCCACGCCACTATGTTCGGACATTCGGCTAAGATGGT
TGCTCACGAGCTTCGGTTACCGTTGCCCTGTGATGAGGCGCTGTGGTCTG
CGACTAGTGCCTCTGAGGTAGCTCGAGTGCAATCGAGCCTGCATGCCAAC
GGAGTCAAGCCTGTCATGTTTTTGGACGGCCTTAAGAAGACGCTTAACGG
ACAGCGGGTCCGGACAAATGCTTTTGGACGAACCATTCTTATGGCTGGCT
TGCTTAGCGTCAGTTGGCACATGAATCAACGAGACCTACAGGTGAGCTCA
CTGGGTGGGCCACCGGCATTGGGAGGCCGGGACAAATGGCGGTCAGCACT
GTTGCGAGCCTATGATAATTGGCGACGAGACTTTGATGAAGCGCTGGGCC
AGTCACCATCGGGGCCATTTCATGGTGGATACCGTACCCGACATCCTCTA
GACGACGATAATGTTTTTGAGTCGCGCGACGTCCTCCATGGATTGGCGCA
TATGGCTTCTCACGTTGATATTGTCGACTGTCAAATCTTCGCTGGAGCTG
GTCGGCTCATGGGACGGTCTATCACCCCCAGAGACTACAAAGCGGCGCGC
GAAAAGATGGTTGATCGCTGGGCCACCAAGGCTACAGCCCGCGACGCCAC
GTTCTATGCTTTGAAGTTCTTATCGGAGTGCCTTCTGGATGAGAAACGAG
CACTGAACGAGGATGGGGAACTGTATTCGGGTCGAGACGATTACCTCTTG
AACCGGCCCTGGGTGCTGTATGTTGCGGCTCTAGTGGTCTGGTGCTATGG
ATATGCACTTGAAGGGCCCTTGAAGACTCCTGTCAAGTTGAGCACCCCTG
CTGCACAGCGGCAGGACATGCAGGAGTTCCTGCGCCGGGTGGGCGGCGTT
CGTGAGCCCAGCGACTTGGAAGGGATGCAAGGATGCAACCGCTGTCTGGG
CTTGTTATTGATCCTCCGGGACGGGTTCGCCAACACGCGCTGGGAGTTAT
TGGCCGAAGCTGCCAATCTGCTCACCAGTTGTATCGACAAGCTGAATGGA
GCAGCTTGCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_44310-T1 | ATCC64974_44310-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR007219 |
| DBxref | InterPro:IPR013087 |
| DBxref | PFAM:PF00096 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000007.1 | supercontig | OGUI01000007.1:335641..338779 + |
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