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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000007.1:348747..350411+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_44360-T1 ID=ATCC64974_44360-T1|Name=ATCC64974_44360-T1|organism=Aspergillus niger N402|type=mRNA|length=1665bp|location=Sequence derived from alignment at OGUI01000007.1:348747..350411+ (Aspergillus niger N402)
ATGGGTGTCGCACATGTCGGTAAGTTACTACCATCCAGGTCTCACATGAC
TGCGGTTGCCGCTAATCCTCCGTCGCATACATACAGCGCCCGCCGCATCA
AATGCGATGAAACCCCCAACCAATGCAAAAACTGCACATCAACCGGGCGC
TCTTGTACCTATGACATCCACCGCCTCCCTCGCGCCGCAAATAATACGTA
CCGTCTTCCTCACGACCTACTCACTCAAGTAACGGACGGCTTCCGCTGGA
CGATAACATCCGACGAGCGGCGCTGCTTCTCACACTTCCAACACTTTACA
ATCCCAGGATTACTGGAATTATTCGACTCGGAACTATGGAAACAGCTCGT
CCTTCAAATCAGTTACTCCGAGCCGGCAGTCTACCACGCTGCGGTGGCCT
TGAGCGCCGTACACCAGGACGTCGAGGTATCGGGGATGCCATTGCCAGGA
CAGACTCGACAGAATATCTGGCAGAAGTTTGCACTCGAACAGTCCGCACG
CTCATTCGGGATATTGAGTCGACGGCATGCGAGTGATCCCCACTTGAGAG
AGGTCATGTTGCTCTGTTGTCTTCTATACTCGCTCCTAGAGCTCCTACAG
GGCCAATACGAGCGAGCATGCCACCATCTCCAAGGCGGCCTACGCATACT
CCGAGAGCTCAAAGTCCAGAAGCCTCTAGCAGACGAAACCGAGTCACCCG
TGGAGAAATGTTTAGTGGCAGCCTTCGTACAGCTAGATATCCAATCGACG
TACTACGGCGTCGACGGACCAGTTCTATGCGTGGACAACGAACTAGGCAA
ATACCAATGGCAACTGAAAAATACCGAGTCATTCGCAAGCCTCATCGAGG
CCCGTCAAGCCATCGAGCCCCTAGTCAGTGGAGTATTCCGATTCACATCA
CAATCCTGGCCACTATCTCCCGCCGACGTGGCGAGAGATTACAACGCCCT
GCTTCCGCGTCAATACCAACTCCTCTCCCAATTAACCCACTACGCCGAAC
TCTTCACCCCATTCTACACCCACGCATACCCCACCCTCACGCGAAAAGAG
CAACGCGGCTCCGACATCATCTACATCCTCCACCGGACCCTCACACTGTC
CGTCAAAACCTGCCTCCTAGCCAAGAACCCCGCCGTGCTCGACATCTACA
CCCCGGAATACCAAGAAGCATTATACCTTGTCGAAGCACTATTACACAAG
TACCCTGAACGGCCAGCGTTCACACTAGACGTGGGCATTCTACCTAGCTT
GTATCTGATCTCGTTCGGATGCTACGATATCCGAGTACGGCTGCGCGCCA
TCGAAGTGCTGCAGCAGTGGCCGCATCGGGAGGGACTGTTCGAGTCGAAA
TGGGCGTCGTTTCTCTTGCTGGAGTTTGTGAAAGCGGATATCAAGAAGGA
TGCGGAGAATGTGCCGGAATTGACGGTGAGTGAGGGTTCCGCGTCCGGGT
CTGGCTCAAGTTCGGCTGCGAGTTCGCCCTCTGCTACGGTGGATCAGTAT
ATGTCTACTGTTGGGCATATTGAGCGCGTTCAGCAGCAGATTATGAGTGG
TCAGGACTTTCTGTTGCAGGATGCGCTGCAGAGCGCGGATTATTTGACTT
CGTGGTCGTGCGTTAAGGCGATAGCGCCGAAGAGAGGGCGCATGGCTAAA
GGATCATCTACTTAA back to topCoding sequence (CDS) from alignment at OGUI01000007.1:348747..350411+ >ATCC64974_44360-T1 ID=ATCC64974_44360-T1|Name=ATCC64974_44360-T1|organism=Aspergillus niger N402|type=CDS|length=1665bp|location=Sequence derived from alignment at OGUI01000007.1:348747..350411+ (Aspergillus niger N402)
ATGGGTGTCGCACATGTCGGTAAGTTACTACCATCCAGGTCTCACATGAC
TGCGGTTGCCGCTAATCCTCCGTCGCATACATACAGCGCCCGCCGCATCA
AATGCGATGAAACCCCCAACCAATGCAAAAACTGCACATCAACCGGGCGC
TCTTGTACCTATGACATCCACCGCCTCCCTCGCGCCGCAAATAATACGTA
CCGTCTTCCTCACGACCTACTCACTCAAGTAACGGACGGCTTCCGCTGGA
CGATAACATCCGACGAGCGGCGCTGCTTCTCACACTTCCAACACTTTACA
ATCCCAGGATTACTGGAATTATTCGACTCGGAACTATGGAAACAGCTCGT
CCTTCAAATCAGTTACTCCGAGCCGGCAGTCTACCACGCTGCGGTGGCCT
TGAGCGCCGTACACCAGGACGTCGAGGTATCGGGGATGCCATTGCCAGGA
CAGACTCGACAGAATATCTGGCAGAAGTTTGCACTCGAACAGTCCGCACG
CTCATTCGGGATATTGAGTCGACGGCATGCGAGTGATCCCCACTTGAGAG
AGGTCATGTTGCTCTGTTGTCTTCTATACTCGCTCCTAGAGCTCCTACAG
GGCCAATACGAGCGAGCATGCCACCATCTCCAAGGCGGCCTACGCATACT
CCGAGAGCTCAAAGTCCAGAAGCCTCTAGCAGACGAAACCGAGTCACCCG
TGGAGAAATGTTTAGTGGCAGCCTTCGTACAGCTAGATATCCAATCGACG
TACTACGGCGTCGACGGACCAGTTCTATGCGTGGACAACGAACTAGGCAA
ATACCAATGGCAACTGAAAAATACCGAGTCATTCGCAAGCCTCATCGAGG
CCCGTCAAGCCATCGAGCCCCTAGTCAGTGGAGTATTCCGATTCACATCA
CAATCCTGGCCACTATCTCCCGCCGACGTGGCGAGAGATTACAACGCCCT
GCTTCCGCGTCAATACCAACTCCTCTCCCAATTAACCCACTACGCCGAAC
TCTTCACCCCATTCTACACCCACGCATACCCCACCCTCACGCGAAAAGAG
CAACGCGGCTCCGACATCATCTACATCCTCCACCGGACCCTCACACTGTC
CGTCAAAACCTGCCTCCTAGCCAAGAACCCCGCCGTGCTCGACATCTACA
CCCCGGAATACCAAGAAGCATTATACCTTGTCGAAGCACTATTACACAAG
TACCCTGAACGGCCAGCGTTCACACTAGACGTGGGCATTCTACCTAGCTT
GTATCTGATCTCGTTCGGATGCTACGATATCCGAGTACGGCTGCGCGCCA
TCGAAGTGCTGCAGCAGTGGCCGCATCGGGAGGGACTGTTCGAGTCGAAA
TGGGCGTCGTTTCTCTTGCTGGAGTTTGTGAAAGCGGATATCAAGAAGGA
TGCGGAGAATGTGCCGGAATTGACGGTGAGTGAGGGTTCCGCGTCCGGGT
CTGGCTCAAGTTCGGCTGCGAGTTCGCCCTCTGCTACGGTGGATCAGTAT
ATGTCTACTGTTGGGCATATTGAGCGCGTTCAGCAGCAGATTATGAGTGG
TCAGGACTTTCTGTTGCAGGATGCGCTGCAGAGCGCGGATTATTTGACTT
CGTGGTCGTGCGTTAAGGCGATAGCGCCGAAGAGAGGGCGCATGGCTAAA
GGATCATCTACTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_44360-T1 | ATCC64974_44360-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR001138 |
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR036864 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000007.1 | supercontig | OGUI01000007.1:348747..350411 + |
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