You are here

Home

ATCC64974_44650-T1, ATCC64974_44650-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_44650-T1
Unique NameATCC64974_44650-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:430518..431610-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_44650-T1 ID=ATCC64974_44650-T1|Name=ATCC64974_44650-T1|organism=Aspergillus niger N402|type=mRNA|length=1093bp|location=Sequence derived from alignment at OGUI01000007.1:430518..431610- (Aspergillus niger N402)
ATGCTTGGTAAAATCGCTCTCGAAGAAGCCTTCGCGCTTCCCCGCTTCGA
AGAGAAGACGCGCTGGTGGGCCAGTCTATTCTCCGTCGACCCCGAAACCC
ACGTCAAGGAGATCACCGACATCAACAAGCTGCGCATCGAACATGCCGAC
AAATACGGTGTGGGGTACCAGATCCTCTCCTACACAGCCCCCGGTGTCCA
AGACATCTGGGATCCCGTTGAAGCCCAAGCCCTAGCCGTTGAAATCAACG
ACTACATCGCAGAGCAGATCCGCGACAAGCCCGATCGCTTTGGCGCATTT
GCGTAAACCTCCCTCTCCCATCCCCACACCCTACCTTACCTCACTTACTC
TAACTCCCAAATGAAGAACCCTCTCCATGCACAACCCCCAAGAAGCCGCC
TCTGAGCTCCGCCGCTGCGTCCAAACCTACGGCTTCAAAGGCGCCCTAGT
AAATGACACCCAACGCGCCGGCCCTGACGGCGACGACATGATCTTCTACG
ACAACGCCTCCTGGGATATCTTCTGGCAAACATGCACGGAACTCGACGTC
CCTCTGTACTTGCACCCTCGCAACCCCACCGGCACCATCTACGAGAAGCT
CTGGGCAGACCGGAAATGGCTCGTGGGTCCGCCGCTCAGCTTCGCGCAGG
GCGTCAGTCTGCATGTTCTGGGGATGGTCACGAACGGCGTGTTTGATCGT
CACCCCAACCTACAGCTCATCATGGGTCATCTAGGTGAACATGTGCCGTT
TGATATGTGGCGCATTAATCATTGGTTCGAGGACCGCAAGAAGTTGTTGG
GATTGGCGGAGACGTGTAAAAAGACGATTCGGGAGTACTTTGCTCAGAAT
ATCTGGATTACGACTTCTGGGCACTTTTCGACGACCACGTTGAACTTCTG
CATGGCGGAGGTCGGGGTCGATCGCATTTTGTTCTCGATTGATTATCCGT
TCGAGACGTTTGAGGATGCGTGTGTTTGGTTTGATGGCGCGGAGTTGAAT
CTTTCCGATAAGGCTAAGATCGGGAGGGATAATGCGGCGAGGCTATTCAA
GTTGGGGGCGTTTAGGGATTATGATGCGAAGGTTAAGGCTTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:430518..431610-

>ATCC64974_44650-T1 ID=ATCC64974_44650-T1|Name=ATCC64974_44650-T1|organism=Aspergillus niger N402|type=CDS|length=2058bp|location=Sequence derived from alignment at OGUI01000007.1:430518..431610- (Aspergillus niger N402)
AACCCTCTCCATGCACAACCCCCAAGAAGCCGCCTCTGAGCTCCGCCGCT
GCGTCCAAACCTACGGCTTCAAAGGCGCCCTAGTAAATGACACCCAACGC
GCCGGCCCTGACGGCGACGACATGATCTTCTACGACAACGCCTCCTGGGA
TATCTTCTGGCAAACATGCACGGAACTCGACGTCCCTCTGTACTTGCACC
CTCGCAACCCCACCGGCACCATCTACGAGAAGCTCTGGGCAGACCGGAAA
TGGCTCGTGGGTCCGCCGCTCAGCTTCGCGCAGGGCGTCAGTCTGCATGT
TCTGGGGATGGTCACGAACGGCGTGTTTGATCGTCACCCCAACCTACAGC
TCATCATGGGTCATCTAGGTGAACATGTGCCGTTTGATATGTGGCGCATT
AATCATTGGTTCGAGGACCGCAAGAAGTTGTTGGGATTGGCGGAGACGTG
TAAAAAGACGATTCGGGAGTACTTTGCTCAGAATATCTGGATTACGACTT
CTGGGCACTTTTCGACGACCACGTTGAACTTCTGCATGGCGGAGGTCGGG
GTCGATCGCATTTTGTTCTCGATTGATTATCCGTTCGAGACGTTTGAGGA
TGCGTGTGTTTGGTTTGATGGCGCGGAGTTGAATCTTTCCGATAAGGCTA
AGATCGGGAGGGATAATGCGGCGAGGCTATTCAAGTTGGGGGCGTTTAGG
GATTATGATGCGAAGGTTAAGGCTTAGATGCTTGGTAAAATCGCTCTCGA
AGAAGCCTTCGCGCTTCCCCGCTTCGAAGAGAAGACGCGCTGGTGGGCCA
GTCTATTCTCCGTCGACCCCGAAACCCACGTCAAGGAGATCACCGACATC
AACAAGCTGCGCATCGAACATGCCGACAAATACGGTGTGGGGTACCAGAT
CCTCTCCTACACAGCCCCCGGTGTCCAAGACATCTGGGATCCCGTTGAAG
CCCAAGCCCTAGCCGTTGAAATCAACGACTACATCGCAGAGCAGATCCGC
GACAAGCCCGATCGCTTTGGCGCATTTGCAACCCTCTCCATGCACAACCC
CCAAGAAGCCGCCTCTGAGCTCCGCCGCTGCGTCCAAACCTACGGCTTCA
AAGGCGCCCTAGTAAATGACACCCAACGCGCCGGCCCTGACGGCGACGAC
ATGATCTTCTACGACAACGCCTCCTGGGATATCTTCTGGCAAACATGCAC
GGAACTCGACGTCCCTCTGTACTTGCACCCTCGCAACCCCACCGGCACCA
TCTACGAGAAGCTCTGGGCAGACCGGAAATGGCTCGTGGGTCCGCCGCTC
AGCTTCGCGCAGGGCGTCAGTCTGCATGTTCTGGGGATGGTCACGAACGG
CGTGTTTGATCGTCACCCCAACCTACAGCTCATCATGGGTCATCTAGGTG
AACATGTGCCGTTTGATATGTGGCGCATTAATCATTGGTTCGAGGACCGC
AAGAAGTTGTTGGGATTGGCGGAGACGTGTAAAAAGACGATTCGGGAGTA
CTTTGCTCAGAATATCTGGATTACGACTTCTGGGCACTTTTCGACGACCA
CGTTGAACTTCTGCATGGCGGAGGTCGGGGTCGATCGCATTTTGTTCTCG
ATTGATTATCCGTTCGAGACGTTTGAGGATGCGTGTGTTTGGTTTGATGG
CGCGGAGTTGAATCTTTCCGATAAGGCTAAGATCGGGAGGGATAATGCGG
CGAGGCTATTCAAGTTGGGGGCGTTTAGGGATTATGATGCGAAGGTTAAG
GCTTAGATGCTTGGTAAAATCGCTCTCGAAGAAGCCTTCGCGCTTCCCCG
CTTCGAAGAGAAGACGCGCTGGTGGGCCAGTCTATTCTCCGTCGACCCCG
AAACCCACGTCAAGGAGATCACCGACATCAACAAGCTGCGCATCGAACAT
GCCGACAAATACGGTGTGGGGTACCAGATCCTCTCCTACACAGCCCCCGG
TGTCCAAGACATCTGGGATCCCGTTGAAGCCCAAGCCCTAGCCGTTGAAA
TCAACGACTACATCGCAGAGCAGATCCGCGACAAGCCCGATCGCTTTGGC
GCATTTGC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_44650ATCC64974_44650Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_44650-T1ATCC64974_44650-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_44650-T1.cdsATCC64974_44650-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_44650-T1.exon2ATCC64974_44650-T1.exon2Aspergillus niger N402exon
ATCC64974_44650-T1.exon1ATCC64974_44650-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR032466
DBxrefInterPro:IPR006680
DBxrefPFAM:PF04909
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:430518..431610 -
Powered by Drupal