ATCC64974_45030-T1, ATCC64974_45030-T1 (mRNA) Aspergillus niger N402

Overview


Name	ATCC64974_45030-T1
Unique Name	ATCC64974_45030-T1
Type	mRNA
Organism	Aspergillus niger N402

Sequences

The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:557726..559388+
coding sequence from alignment at OGUI01000007.1:557726..559388+

mRNA from alignment at OGUI01000007.1:557726..559388+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>ATCC64974_45030-T1 ID=ATCC64974_45030-T1|Name=ATCC64974_45030-T1|organism=Aspergillus niger N402|type=mRNA|length=1663bp|location=Sequence derived from alignment at OGUI01000007.1:557726..559388+ (Aspergillus niger N402)
ATGTCCCACTACTACGAAGGGGACAAGCCCTCCACAGGGGCGCCCGTTCC
CGTCCAGCTATCGGCTGCTGACGAGGATGAGCAGCCCACGATGAGTCCCA
TCAAGTATATGGCCACCCGTCTTACAACTCTGGTGCCTCCGATGAATCCA
GCCCCCAATCCCTTTAAGGCGCTCATGCTCCTCAATCGGAAGCAATGGCT
CTTTTTTGGGGTACGTTTCACGCCGATGTCGAACCCCGTTTTTGCGCCAT
GACTAACCGCGGTTGTAGGTTGCTTTTGCCGGCTGGACATGGGATGCCTT
CGACTTCTTCACCGTGTCCTTGACTGCCACCGATCTTGCAAAGACGTTCG
ACAAATCTGTCACTGACATCACCTGGGGAATCACCCTGGTGCTGATGCTT
CGGTCCGTGGGCGCCATTACATTTGGAGTCGCTGCCGATCGCTGGGGTCG
GAAGTGGCCCTTTATCGTGAATAATCTTCTGTTTGTTGTGTTGGAGCTGG
GCACGGGTTTCTGTCAGACCTACAAGCAATTTTTGGCTTGTCGCGCTCTC
TTTGGGATTGCCATGGGAGGGTTGTACGGCAATGCCGCGGCGACCGCGCT
CGAGGACTGTCCCATGGAGGCGCGCGGTATTGTGTCCGGCTTGCTGCAGC
AAGGCTATGCGTTTGGATACTTGCTGGCTACGGCATTTGCCCGCGGCCTG
GTTAATACTACCTCCCATGGCTGGCGACCGCTCTACTGGTTCGGTGCCTG
TCCGCCCGTGCTAATCATCATTTACCGGATGTTCCTGCCTGAGACCGATA
CCTTCCTCCAGCGCCAGGCCACTCGCGAGCATGTTCGGGGTGGAGTGACT
ACGACTTTCTTGTCAGAGGGTAACACAGCCTTGAAGAGACATTGGCTGCT
TCTGATCTATCTGGTCTTGCTCATGGCTGGCTTCAACTTCATGGTACGTT
TGGATTTATCCTTCTACTCAATCTATTCTATTATAAGGGCATCACTAACC
AAATCCCAGTCCCACGGCTCCCAAGATCTCTACCCAACCATGCTTGAAAA
TCAATTCAACTTCTCCGCCGATGCCGTCACCGTCACCCAGGTCGTCGCCA
ACCTTGGCGCCCTGACTGGTGGTACCACCTGCGGCTGGGCCAGTCAGATC
TTCGGTCGTCGCTTCTCCATCGTCTTCATTTGCATTATTGGCGGCGCACT
CCTCTACCCCTACACCTTTGTCACGAACCACAACGTCATGGCCGCCGCCT
TCTTTGAACAATTCTGCGTGCAAGGCGCATGGGGTGTCATCCCCATCCAC
TTGATGGAGCTGTCGCCGGGTGCTATTCGCACCTTCGCGGTGGGTACGGC
CTACCAGCTGGGCAACCTGGTCTCGTCGGCTAGTTCGACGATCGAGTCCA
CGATCGGGGAACGGTTCCCCTTGCCACCCACGGAGGATGGTACCAAGCGG
TACCAGTATGGCAAGGTCATTTGTATCTTCATGGGGTGTGTGTATGGATA
TACGATTCTGGTGACATTGATCGGCCCCGAGAGACTGGGACGTAAGTTTG
ATGTCGCGCATGATGGGGATATGGCGGTCGTGGCGGCACAACGGGGCACG
GATGGGGAGGTGGAGGTAGAGGGTGATCCGGAGAAGGGTACATCGAGGAT
GGTGGAGGGTTGA

Coding sequence (CDS) from alignment at OGUI01000007.1:557726..559388+

>ATCC64974_45030-T1 ID=ATCC64974_45030-T1|Name=ATCC64974_45030-T1|organism=Aspergillus niger N402|type=CDS|length=4617bp|location=Sequence derived from alignment at OGUI01000007.1:557726..559388+ (Aspergillus niger N402)
ATGTCCCACTACTACGAAGGGGACAAGCCCTCCACAGGGGCGCCCGTTCC
CGTCCAGCTATCGGCTGCTGACGAGGATGAGCAGCCCACGATGAGTCCCA
TCAAGTATATGGCCACCCGTCTTACAACTCTGGTGCCTCCGATGAATCCA
GCCCCCAATCCCTTTAAGGCGCTCATGCTCCTCAATCGGAAGCAATGGCT
CTTTTTTGGGGTTGCTTTTGCCGGCTGGACATGGGATGCCTTCGACTTCT
TCACCGTGTCCTTGACTGCCACCGATCTTGCAAAGACGTTCGACAAATCT
GTCACTGACATCACCTGGGGAATCACCCTGGTGCTGATGCTTCGGTCCGT
GGGCGCCATTACATTTGGAGTCGCTGCCGATCGCTGGGGTCGGAAGTGGC
CCTTTATCGTGAATAATCTTCTGTTTGTTGTGTTGGAGCTGGGCACGGGT
TTCTGTCAGACCTACAAGCAATTTTTGGCTTGTCGCGCTCTCTTTGGGAT
TGCCATGGGAGGGTTGTACGGCAATGCCGCGGCGACCGCGCTCGAGGACT
GTCCCATGGAGGCGCGCGGTATTGTGTCCGGCTTGCTGCAGCAAGGCTAT
GCGTTTGGATACTTGCTGGCTACGGCATTTGCCCGCGGCCTGGTTAATAC
TACCTCCCATGGCTGGCGACCGCTCTACTGGTTCGGTGCCTGTCCGCCCG
TGCTAATCATCATTTACCGGATGTTCCTGCCTGAGACCGATACCTTCCTC
CAGCGCCAGGCCACTCGCGAGCATGTTCGGGGTGGAGTGACTACGACTTT
CTTGTCAGAGGGTAACACAGCCTTGAAGAGACATTGGCTGCTTCTGATCT
ATCTGGTCTTGCTCATGGCTGGCTTCAACTTCATGTCCCACGGCTCCCAA
GATCTCTACCCAACCATGCTTGAAAATCAATTCAACTTCTCCGCCGATGC
CGTCACCGTCACCCAGGTCGTCGCCAACCTTGGCGCCCTGACTGGTGGTA
CCACCTGCGGCTGGGCCAGTCAGATCTTCGGTCGTCGCTTCTCCATCGTC
TTCATTTGCATTATTGGCGGCGCACTCCTCTACCCCTACACCTTTGTCAC
GAACCACAACGTCATGGCCGCCGCCTTCTTTGAACAATTCTGCGTGCAAG
GCGCATGGGGTGTCATCCCCATCCACTTGATGGAGCTGTCGCCGGGTGCT
ATTCGCACCTTCGCGGTGGGTACGGCCTACCAGCTGGGCAACCTGGTCTC
GTCGGCTAGTTCGACGATCGAGTCCACGATCGGGGAACGGTTCCCCTTGC
CACCCACGGAGGATGGTACCAAGCGGTACCAGTATGGCAAGGTCATTTGT
ATCTTCATGGGGTGTGTGTATGGATATACGATTCTGGTGACATTGATCGG
CCCCGAGAGACTGGGACGTAAGTTTGATGTCGCGCATGATGGGGATATGG
CGGTCGTGGCGGCACAACGGGGCACGGATGGGGAGGTGGAGGTAGAGGGT
GATCCGGAGAAGGGTACATCGAGGATGGTGGAGGGTTGAATGTCCCACTA
CTACGAAGGGGACAAGCCCTCCACAGGGGCGCCCGTTCCCGTCCAGCTAT
CGGCTGCTGACGAGGATGAGCAGCCCACGATGAGTCCCATCAAGTATATG
GCCACCCGTCTTACAACTCTGGTGCCTCCGATGAATCCAGCCCCCAATCC
CTTTAAGGCGCTCATGCTCCTCAATCGGAAGCAATGGCTCTTTTTTGGGG
TTGCTTTTGCCGGCTGGACATGGGATGCCTTCGACTTCTTCACCGTGTCC
TTGACTGCCACCGATCTTGCAAAGACGTTCGACAAATCTGTCACTGACAT
CACCTGGGGAATCACCCTGGTGCTGATGCTTCGGTCCGTGGGCGCCATTA
CATTTGGAGTCGCTGCCGATCGCTGGGGTCGGAAGTGGCCCTTTATCGTG
AATAATCTTCTGTTTGTTGTGTTGGAGCTGGGCACGGGTTTCTGTCAGAC
CTACAAGCAATTTTTGGCTTGTCGCGCTCTCTTTGGGATTGCCATGGGAG
GGTTGTACGGCAATGCCGCGGCGACCGCGCTCGAGGACTGTCCCATGGAG
GCGCGCGGTATTGTGTCCGGCTTGCTGCAGCAAGGCTATGCGTTTGGATA
CTTGCTGGCTACGGCATTTGCCCGCGGCCTGGTTAATACTACCTCCCATG
GCTGGCGACCGCTCTACTGGTTCGGTGCCTGTCCGCCCGTGCTAATCATC
ATTTACCGGATGTTCCTGCCTGAGACCGATACCTTCCTCCAGCGCCAGGC
CACTCGCGAGCATGTTCGGGGTGGAGTGACTACGACTTTCTTGTCAGAGG
GTAACACAGCCTTGAAGAGACATTGGCTGCTTCTGATCTATCTGGTCTTG
CTCATGGCTGGCTTCAACTTCATGTCCCACGGCTCCCAAGATCTCTACCC
AACCATGCTTGAAAATCAATTCAACTTCTCCGCCGATGCCGTCACCGTCA
CCCAGGTCGTCGCCAACCTTGGCGCCCTGACTGGTGGTACCACCTGCGGC
TGGGCCAGTCAGATCTTCGGTCGTCGCTTCTCCATCGTCTTCATTTGCAT
TATTGGCGGCGCACTCCTCTACCCCTACACCTTTGTCACGAACCACAACG
TCATGGCCGCCGCCTTCTTTGAACAATTCTGCGTGCAAGGCGCATGGGGT
GTCATCCCCATCCACTTGATGGAGCTGTCGCCGGGTGCTATTCGCACCTT
CGCGGTGGGTACGGCCTACCAGCTGGGCAACCTGGTCTCGTCGGCTAGTT
CGACGATCGAGTCCACGATCGGGGAACGGTTCCCCTTGCCACCCACGGAG
GATGGTACCAAGCGGTACCAGTATGGCAAGGTCATTTGTATCTTCATGGG
GTGTGTGTATGGATATACGATTCTGGTGACATTGATCGGCCCCGAGAGAC
TGGGACGTAAGTTTGATGTCGCGCATGATGGGGATATGGCGGTCGTGGCG
GCACAACGGGGCACGGATGGGGAGGTGGAGGTAGAGGGTGATCCGGAGAA
GGGTACATCGAGGATGGTGGAGGGTTGAATGTCCCACTACTACGAAGGGG
ACAAGCCCTCCACAGGGGCGCCCGTTCCCGTCCAGCTATCGGCTGCTGAC
GAGGATGAGCAGCCCACGATGAGTCCCATCAAGTATATGGCCACCCGTCT
TACAACTCTGGTGCCTCCGATGAATCCAGCCCCCAATCCCTTTAAGGCGC
TCATGCTCCTCAATCGGAAGCAATGGCTCTTTTTTGGGGTTGCTTTTGCC
GGCTGGACATGGGATGCCTTCGACTTCTTCACCGTGTCCTTGACTGCCAC
CGATCTTGCAAAGACGTTCGACAAATCTGTCACTGACATCACCTGGGGAA
TCACCCTGGTGCTGATGCTTCGGTCCGTGGGCGCCATTACATTTGGAGTC
GCTGCCGATCGCTGGGGTCGGAAGTGGCCCTTTATCGTGAATAATCTTCT
GTTTGTTGTGTTGGAGCTGGGCACGGGTTTCTGTCAGACCTACAAGCAAT
TTTTGGCTTGTCGCGCTCTCTTTGGGATTGCCATGGGAGGGTTGTACGGC
AATGCCGCGGCGACCGCGCTCGAGGACTGTCCCATGGAGGCGCGCGGTAT
TGTGTCCGGCTTGCTGCAGCAAGGCTATGCGTTTGGATACTTGCTGGCTA
CGGCATTTGCCCGCGGCCTGGTTAATACTACCTCCCATGGCTGGCGACCG
CTCTACTGGTTCGGTGCCTGTCCGCCCGTGCTAATCATCATTTACCGGAT
GTTCCTGCCTGAGACCGATACCTTCCTCCAGCGCCAGGCCACTCGCGAGC
ATGTTCGGGGTGGAGTGACTACGACTTTCTTGTCAGAGGGTAACACAGCC
TTGAAGAGACATTGGCTGCTTCTGATCTATCTGGTCTTGCTCATGGCTGG
CTTCAACTTCATGTCCCACGGCTCCCAAGATCTCTACCCAACCATGCTTG
AAAATCAATTCAACTTCTCCGCCGATGCCGTCACCGTCACCCAGGTCGTC
GCCAACCTTGGCGCCCTGACTGGTGGTACCACCTGCGGCTGGGCCAGTCA
GATCTTCGGTCGTCGCTTCTCCATCGTCTTCATTTGCATTATTGGCGGCG
CACTCCTCTACCCCTACACCTTTGTCACGAACCACAACGTCATGGCCGCC
GCCTTCTTTGAACAATTCTGCGTGCAAGGCGCATGGGGTGTCATCCCCAT
CCACTTGATGGAGCTGTCGCCGGGTGCTATTCGCACCTTCGCGGTGGGTA
CGGCCTACCAGCTGGGCAACCTGGTCTCGTCGGCTAGTTCGACGATCGAG
TCCACGATCGGGGAACGGTTCCCCTTGCCACCCACGGAGGATGGTACCAA
GCGGTACCAGTATGGCAAGGTCATTTGTATCTTCATGGGGTGTGTGTATG
GATATACGATTCTGGTGACATTGATCGGCCCCGAGAGACTGGGACGTAAG
TTTGATGTCGCGCATGATGGGGATATGGCGGTCGTGGCGGCACAACGGGG
CACGGATGGGGAGGTGGAGGTAGAGGGTGATCCGGAGAAGGGTACATCGA
GGATGGTGGAGGGTTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0022857	transmembrane transporter activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
ATCC64974_45030	ATCC64974_45030	Aspergillus niger N402	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
ATCC64974_45030-T1.exon1	ATCC64974_45030-T1.exon1	Aspergillus niger N402	exon
ATCC64974_45030-T1.exon2	ATCC64974_45030-T1.exon2	Aspergillus niger N402	exon
ATCC64974_45030-T1.exon3	ATCC64974_45030-T1.exon3	Aspergillus niger N402	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
ATCC64974_45030-T1.cds	ATCC64974_45030-T1.cds	Aspergillus niger N402	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
ATCC64974_45030-T1	ATCC64974_45030-T1-protein	Aspergillus niger N402	polypeptide

Properties


Property Name	Value
Note	antiSMASH:Cluster_10000071.4
Note	SMCOG1169:sugar transport protein
DBxref	InterPro:IPR036259
DBxref	InterPro:IPR020846
DBxref	InterPro:IPR005828
DBxref	PFAM:PF00083
DBxref	PFAM:PF07690
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger N402 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
OGUI01000007.1	supercontig	OGUI01000007.1:557726..559388 +

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ATCC64974_45030-T1, ATCC64974_45030-T1 (mRNA) Aspergillus niger N402

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ATCC64974_45030-T1, ATCC64974_45030-T1 (mRNA) Aspergillus niger N402