You are here

Home

ATCC64974_45080-T1, ATCC64974_45080-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_45080-T1
Unique NameATCC64974_45080-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:585575..588488+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_45080-T1 ID=ATCC64974_45080-T1|Name=ATCC64974_45080-T1|organism=Aspergillus niger N402|type=mRNA|length=2914bp|location=Sequence derived from alignment at OGUI01000007.1:585575..588488+ (Aspergillus niger N402)
ATGCCGCTCATTGCATCCCCCGCTCCCTTCCCGTCGAGCGCTCCGTCGCC
GGAGTCGCAGAAAAGAAAGAATGAAGAGCAATCGCAAACCGAAGAGCCCA
AGCGGCAGAAGATTATGGGAGGATTCTTGGATGAGGCAGACGACGATGAT
GATTGGGATGCCTTCAACGATGCGCAACTAAGAAGCGAGTTTCAGGTGCA
GGAGGACATTATTCAACAGCCACCTGTTGAACTCCCTGAAATCCCGAGGC
CTTCTCAACTGCCAACAGAATCGACTCCCAAGCCAGCGTCTACTGCGCCA
GACCTTGAGCCCACTCCCGTTCCGGAACAGAGCACAGTCACGTCACTTCC
CTCACGAAGACCATATCGATCAATCCAAATAAAGACCTGCTCGGGCAAGA
CGCACCATGTTTCGTTAAAGAAACCCGCACCGCGGGTCAGCTACGAAAGA
CTTGTTGCTGGTCGCTCCGTGACTGCCCCTGGGAGGGCTCAGAAGAGCTA
CTACGGTATTGATATCCACAGGCTTCTTGATGAAGCTGCGAATGAGCCGG
AAGCCCCCCCGGCCGCCGAATCACGACCTGCTCCGACGGTACAACCGTCT
ATCGAAGCCCCGATCCACGATCAGAAGAGCGCAAAGCTGGCTGCAGCCAT
GTGGACCGAGAAATACCGCGCACGGAAGTTTACTGAATTGATCGGAGACG
AGCGCACGCATCGATCTGTTCTGCGGTGGCTGAAGGCCTGGGAACCTATC
GTGTTTCCAAACATCGCTAGGTCGAAGGCGAAGAAGCCGTATGGCAAAGA
GGATGAGGAACGGACACATCGGAAGGTTCTATTGTTATGTGGCCCGCCGG
GTCTAGGCAAGACTACGTTGGCACATGTATGTGCACGACAGGCTGGCTAC
GAAGTGCTGGAAATCAACGCGAGTGATGATCGAAGCAAGGATGTGGTTAA
GGGCAGAATTCGGGATTCTCTGGGCACAGAGAACGTCAAGGGCATGAATG
TGGAGATCGGCGAGGAAAGGGTACGCAAAGCCGGACGGCCTGTTTGTGTT
GTCGTCGACGAAGTAGACGGCGTCGTCAGCGGATCTGGAGGCGGTGGTGA
GGGTGGTTTCATGAAAGCCTTGATCGACCTTGTCTTGCTGGACCAGAAGA
ATTCGTCAGGCGCCACTGAGCAGACCAAGGGCAGGAAAAAGAAGGGCGAC
AACTTCCGATTCCTGCGTCCGCTGATCATGGTCTGCAACGATGTCTACCA
TCCTAGTCTACGACCACTACGCGCGGCCTCGGTTGCAGAGATCATCCATG
TCCGTCAAGCGCCATTGGAGAACGTTGTCACACGCATGAAACGGATCTTC
ACCGTCGAAGGCATCCCATCTGACAACGATGGTGTCCGACGGCTCTGCGA
AGCCTCCTGGGGCCTTGCTCGCCGCAAACAAGGAGGCGTCAAGAGCAGCG
GAACGGCAGAAGGCGACATCCGCAGTGTTCTCGTGGCAGCAGAATGGGTG
GCGCATAAGCTAAGGAACGAATGCCCATCCACCCTACGGCTGACCCGAAG
CTGGCTGGAACAAAAGGTCCTCAGCGCCAACAGTAGTGGCAGTGCCTTCT
TCAAGGGCCTAAACCGCGGTGGTGTGCGCGATCTCATTGAACGAGTTTTC
ACGGAAGGAGCAGGCTTCACGGATGCACCTGTTGGCGTCGACTCCTTCCG
CGATCCCTTCTCCAACTCCGAGGACAAAGTACCAGTAGGCGTCGCCGACC
TCCGGAAACGCCATGCCATTGAGCGACTACGCGAAATGGTCGACGCCAGC
GGCGAGCACGACCGCGCCGTGGCAGAATGCTTTGCGTCCTACCCCCTGCA
GAGCTACCAAGACGACACCTTCCTCTCCAAACCCAACGCAGCCTACGACT
GGCTACACTTTCACGACACTATGTCCTCCAAGGTCTACACTGCACAAGAC
TGGGAGCTGAGCGCCTATCTCAGCCAATCTGTCGTAGCATTCCACCATCT
CTTCGCCACAGCCCAAGGCAAAGCCAAAGCACCAGAAGTCAACGATGAAG
AAGAGGAACATCCATTCTCAGGCCCCCGAGCAGACTTTGCAGCCTACGAA
GCGCAGAAACAGAACCGAGCCATCCTCACAGAATTCCAATCCGCATTCTC
AGCCCCCTTATCCCGCCTCTTCCGGTCCACCGACTCTCTAGTCATCGACC
TCATCCCGAACCTCGTCCGGATGCTCTCCCCGGACGTGAAACCAGTCGTC
GTCCGCGGCAGCGGCGAGCAGCGCAGCGTAGCCAGCGTGCGCAAAGAGAG
CGAACGCACCCTCATCCAAGCCGCCGTCCGCGTGATGGCCGGTCTAGGCG
TCCGATTCGAGAAAGTACGCATCGAGAACGCCGGAGCCCACGGAGGATGG
GCCTACCGGATGGAACCGTACGCTCCCTTTTCCTTCCCCTACACTCCACC
CCCTACAACCCTTATATAACCAAACTAACCCCGACAGGCCCCTCGACACC
TTCATCACATTCTCCAAAACCAAATCCGCCCCCACAGCCAGCGGCTCCGC
CCCCGTCCGCTACGCGATTCGCCAAGTCCTAGACCAAGAATACCGCAAAG
AGAACATCCGCAAGCAATCCGAACCCCTAACGACATCCAAGATCGGCAAG
AAGTCATCCGGCAAGTCCGCCGACGGACAGTCCAAGGACGACGGCGATGC
GAGGAAGCCCGCGCACGGGCCGAACGTGAAACGGGACTTCTTCGGCAGAG
TCATCAAGGAGCCGACGCCGCCGCCGTCAGATGAGTCGCCTGAGACGGCG
AAGCAGAATGAGACGTTGAAGGCAGGCAGACGCGTCTGGGTGACGTACCA
TGATGGGTTTTCGAATGCGGTCAGGAAACCTATTTCGATGGGAGAATTGT
TGGCGGAGTTGTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:585575..588488+

>ATCC64974_45080-T1 ID=ATCC64974_45080-T1|Name=ATCC64974_45080-T1|organism=Aspergillus niger N402|type=CDS|length=5688bp|location=Sequence derived from alignment at OGUI01000007.1:585575..588488+ (Aspergillus niger N402)
ATGCCGCTCATTGCATCCCCCGCTCCCTTCCCGTCGAGCGCTCCGTCGCC
GGAGTCGCAGAAAAGAAAGAATGAAGAGCAATCGCAAACCGAAGAGCCCA
AGCGGCAGAAGATTATGGGAGGATTCTTGGATGAGGCAGACGACGATGAT
GATTGGGATGCCTTCAACGATGCGCAACTAAGAAGCGAGTTTCAGGTGCA
GGAGGACATTATTCAACAGCCACCTGTTGAACTCCCTGAAATCCCGAGGC
CTTCTCAACTGCCAACAGAATCGACTCCCAAGCCAGCGTCTACTGCGCCA
GACCTTGAGCCCACTCCCGTTCCGGAACAGAGCACAGTCACGTCACTTCC
CTCACGAAGACCATATCGATCAATCCAAATAAAGACCTGCTCGGGCAAGA
CGCACCATGTTTCGTTAAAGAAACCCGCACCGCGGGTCAGCTACGAAAGA
CTTGTTGCTGGTCGCTCCGTGACTGCCCCTGGGAGGGCTCAGAAGAGCTA
CTACGGTATTGATATCCACAGGCTTCTTGATGAAGCTGCGAATGAGCCGG
AAGCCCCCCCGGCCGCCGAATCACGACCTGCTCCGACGGTACAACCGTCT
ATCGAAGCCCCGATCCACGATCAGAAGAGCGCAAAGCTGGCTGCAGCCAT
GTGGACCGAGAAATACCGCGCACGGAAGTTTACTGAATTGATCGGAGACG
AGCGCACGCATCGATCTGTTCTGCGGTGGCTGAAGGCCTGGGAACCTATC
GTGTTTCCAAACATCGCTAGGTCGAAGGCGAAGAAGCCGTATGGCAAAGA
GGATGAGGAACGGACACATCGGAAGGTTCTATTGTTATGTGGCCCGCCGG
GTCTAGGCAAGACTACGTTGGCACATGTATGTGCACGACAGGCTGGCTAC
GAAGTGCTGGAAATCAACGCGAGTGATGATCGAAGCAAGGATGTGGTTAA
GGGCAGAATTCGGGATTCTCTGGGCACAGAGAACGTCAAGGGCATGAATG
TGGAGATCGGCGAGGAAAGGGTACGCAAAGCCGGACGGCCTGTTTGTGTT
GTCGTCGACGAAGTAGACGGCGTCGTCAGCGGATCTGGAGGCGGTGGTGA
GGGTGGTTTCATGAAAGCCTTGATCGACCTTGTCTTGCTGGACCAGAAGA
ATTCGTCAGGCGCCACTGAGCAGACCAAGGGCAGGAAAAAGAAGGGCGAC
AACTTCCGATTCCTGCGTCCGCTGATCATGGTCTGCAACGATGTCTACCA
TCCTAGTCTACGACCACTACGCGCGGCCTCGGTTGCAGAGATCATCCATG
TCCGTCAAGCGCCATTGGAGAACGTTGTCACACGCATGAAACGGATCTTC
ACCGTCGAAGGCATCCCATCTGACAACGATGGTGTCCGACGGCTCTGCGA
AGCCTCCTGGGGCCTTGCTCGCCGCAAACAAGGAGGCGTCAAGAGCAGCG
GAACGGCAGAAGGCGACATCCGCAGTGTTCTCGTGGCAGCAGAATGGGTG
GCGCATAAGCTAAGGAACGAATGCCCATCCACCCTACGGCTGACCCGAAG
CTGGCTGGAACAAAAGGTCCTCAGCGCCAACAGTAGTGGCAGTGCCTTCT
TCAAGGGCCTAAACCGCGGTGGTGTGCGCGATCTCATTGAACGAGTTTTC
ACGGAAGGAGCAGGCTTCACGGATGCACCTGTTGGCGTCGACTCCTTCCG
CGATCCCTTCTCCAACTCCGAGGACAAAGTACCAGTAGGCGTCGCCGACC
TCCGGAAACGCCATGCCATTGAGCGACTACGCGAAATGGTCGACGCCAGC
GGCGAGCACGACCGCGCCGTGGCAGAATGCTTTGCGTCCTACCCCCTGCA
GAGCTACCAAGACGACACCTTCCTCTCCAAACCCAACGCAGCCTACGACT
GGCTACACTTTCACGACACTATGTCCTCCAAGGTCTACACTGCACAAGAC
TGGGAGCTGAGCGCCTATCTCAGCCAATCTGTCGTAGCATTCCACCATCT
CTTCGCCACAGCCCAAGGCAAAGCCAAAGCACCAGAAGTCAACGATGAAG
AAGAGGAACATCCATTCTCAGGCCCCCGAGCAGACTTTGCAGCCTACGAA
GCGCAGAAACAGAACCGAGCCATCCTCACAGAATTCCAATCCGCATTCTC
AGCCCCCTTATCCCGCCTCTTCCGGTCCACCGACTCTCTAGTCATCGACC
TCATCCCGAACCTCGTCCGGATGCTCTCCCCGGACGTGAAACCAGTCGTC
GTCCGCGGCAGCGGCGAGCAGCGCAGCGTAGCCAGCGTGCGCAAAGAGAG
CGAACGCACCCTCATCCAAGCCGCCGTCCGCGTGATGGCCGGTCTAGGCG
TCCGATTCGAGAAAGTACGCATCGAGAACGCCGGAGCCCACGGAGGATGG
GCCTACCGGATGGAACCGCCCCTCGACACCTTCATCACATTCTCCAAAAC
CAAATCCGCCCCCACAGCCAGCGGCTCCGCCCCCGTCCGCTACGCGATTC
GCCAAGTCCTAGACCAAGAATACCGCAAAGAGAACATCCGCAAGCAATCC
GAACCCCTAACGACATCCAAGATCGGCAAGAAGTCATCCGGCAAGTCCGC
CGACGGACAGTCCAAGGACGACGGCGATGCGAGGAAGCCCGCGCACGGGC
CGAACGTGAAACGGGACTTCTTCGGCAGAGTCATCAAGGAGCCGACGCCG
CCGCCGTCAGATGAGTCGCCTGAGACGGCGAAGCAGAATGAGACGTTGAA
GGCAGGCAGACGCGTCTGGGTGACGTACCATGATGGGTTTTCGAATGCGG
TCAGGAAACCTATTTCGATGGGAGAATTGTTGGCGGAGTTGTAGATGCCG
CTCATTGCATCCCCCGCTCCCTTCCCGTCGAGCGCTCCGTCGCCGGAGTC
GCAGAAAAGAAAGAATGAAGAGCAATCGCAAACCGAAGAGCCCAAGCGGC
AGAAGATTATGGGAGGATTCTTGGATGAGGCAGACGACGATGATGATTGG
GATGCCTTCAACGATGCGCAACTAAGAAGCGAGTTTCAGGTGCAGGAGGA
CATTATTCAACAGCCACCTGTTGAACTCCCTGAAATCCCGAGGCCTTCTC
AACTGCCAACAGAATCGACTCCCAAGCCAGCGTCTACTGCGCCAGACCTT
GAGCCCACTCCCGTTCCGGAACAGAGCACAGTCACGTCACTTCCCTCACG
AAGACCATATCGATCAATCCAAATAAAGACCTGCTCGGGCAAGACGCACC
ATGTTTCGTTAAAGAAACCCGCACCGCGGGTCAGCTACGAAAGACTTGTT
GCTGGTCGCTCCGTGACTGCCCCTGGGAGGGCTCAGAAGAGCTACTACGG
TATTGATATCCACAGGCTTCTTGATGAAGCTGCGAATGAGCCGGAAGCCC
CCCCGGCCGCCGAATCACGACCTGCTCCGACGGTACAACCGTCTATCGAA
GCCCCGATCCACGATCAGAAGAGCGCAAAGCTGGCTGCAGCCATGTGGAC
CGAGAAATACCGCGCACGGAAGTTTACTGAATTGATCGGAGACGAGCGCA
CGCATCGATCTGTTCTGCGGTGGCTGAAGGCCTGGGAACCTATCGTGTTT
CCAAACATCGCTAGGTCGAAGGCGAAGAAGCCGTATGGCAAAGAGGATGA
GGAACGGACACATCGGAAGGTTCTATTGTTATGTGGCCCGCCGGGTCTAG
GCAAGACTACGTTGGCACATGTATGTGCACGACAGGCTGGCTACGAAGTG
CTGGAAATCAACGCGAGTGATGATCGAAGCAAGGATGTGGTTAAGGGCAG
AATTCGGGATTCTCTGGGCACAGAGAACGTCAAGGGCATGAATGTGGAGA
TCGGCGAGGAAAGGGTACGCAAAGCCGGACGGCCTGTTTGTGTTGTCGTC
GACGAAGTAGACGGCGTCGTCAGCGGATCTGGAGGCGGTGGTGAGGGTGG
TTTCATGAAAGCCTTGATCGACCTTGTCTTGCTGGACCAGAAGAATTCGT
CAGGCGCCACTGAGCAGACCAAGGGCAGGAAAAAGAAGGGCGACAACTTC
CGATTCCTGCGTCCGCTGATCATGGTCTGCAACGATGTCTACCATCCTAG
TCTACGACCACTACGCGCGGCCTCGGTTGCAGAGATCATCCATGTCCGTC
AAGCGCCATTGGAGAACGTTGTCACACGCATGAAACGGATCTTCACCGTC
GAAGGCATCCCATCTGACAACGATGGTGTCCGACGGCTCTGCGAAGCCTC
CTGGGGCCTTGCTCGCCGCAAACAAGGAGGCGTCAAGAGCAGCGGAACGG
CAGAAGGCGACATCCGCAGTGTTCTCGTGGCAGCAGAATGGGTGGCGCAT
AAGCTAAGGAACGAATGCCCATCCACCCTACGGCTGACCCGAAGCTGGCT
GGAACAAAAGGTCCTCAGCGCCAACAGTAGTGGCAGTGCCTTCTTCAAGG
GCCTAAACCGCGGTGGTGTGCGCGATCTCATTGAACGAGTTTTCACGGAA
GGAGCAGGCTTCACGGATGCACCTGTTGGCGTCGACTCCTTCCGCGATCC
CTTCTCCAACTCCGAGGACAAAGTACCAGTAGGCGTCGCCGACCTCCGGA
AACGCCATGCCATTGAGCGACTACGCGAAATGGTCGACGCCAGCGGCGAG
CACGACCGCGCCGTGGCAGAATGCTTTGCGTCCTACCCCCTGCAGAGCTA
CCAAGACGACACCTTCCTCTCCAAACCCAACGCAGCCTACGACTGGCTAC
ACTTTCACGACACTATGTCCTCCAAGGTCTACACTGCACAAGACTGGGAG
CTGAGCGCCTATCTCAGCCAATCTGTCGTAGCATTCCACCATCTCTTCGC
CACAGCCCAAGGCAAAGCCAAAGCACCAGAAGTCAACGATGAAGAAGAGG
AACATCCATTCTCAGGCCCCCGAGCAGACTTTGCAGCCTACGAAGCGCAG
AAACAGAACCGAGCCATCCTCACAGAATTCCAATCCGCATTCTCAGCCCC
CTTATCCCGCCTCTTCCGGTCCACCGACTCTCTAGTCATCGACCTCATCC
CGAACCTCGTCCGGATGCTCTCCCCGGACGTGAAACCAGTCGTCGTCCGC
GGCAGCGGCGAGCAGCGCAGCGTAGCCAGCGTGCGCAAAGAGAGCGAACG
CACCCTCATCCAAGCCGCCGTCCGCGTGATGGCCGGTCTAGGCGTCCGAT
TCGAGAAAGTACGCATCGAGAACGCCGGAGCCCACGGAGGATGGGCCTAC
CGGATGGAACCGCCCCTCGACACCTTCATCACATTCTCCAAAACCAAATC
CGCCCCCACAGCCAGCGGCTCCGCCCCCGTCCGCTACGCGATTCGCCAAG
TCCTAGACCAAGAATACCGCAAAGAGAACATCCGCAAGCAATCCGAACCC
CTAACGACATCCAAGATCGGCAAGAAGTCATCCGGCAAGTCCGCCGACGG
ACAGTCCAAGGACGACGGCGATGCGAGGAAGCCCGCGCACGGGCCGAACG
TGAAACGGGACTTCTTCGGCAGAGTCATCAAGGAGCCGACGCCGCCGCCG
TCAGATGAGTCGCCTGAGACGGCGAAGCAGAATGAGACGTTGAAGGCAGG
CAGACGCGTCTGGGTGACGTACCATGATGGGTTTTCGAATGCGGTCAGGA
AACCTATTTCGATGGGAGAATTGTTGGCGGAGTTGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CTF18ATCC64974_45080Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_45080-T1.exon1ATCC64974_45080-T1.exon1Aspergillus niger N402exon
ATCC64974_45080-T1.exon2ATCC64974_45080-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_45080-T1.cdsATCC64974_45080-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_45080-T1ATCC64974_45080-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09260N2T
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR003593
DBxrefPFAM:PF07728
DBxrefPFAM:PF13401
DBxrefPFAM:PF00004
ProductSubunit of a complex with Ctf18p
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:585575..588488 +
Powered by Drupal