You are here

Home

ATCC64974_45110-T1, ATCC64974_45110-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_45110-T1
Unique NameATCC64974_45110-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:599588..600988+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_45110-T1 ID=ATCC64974_45110-T1|Name=ATCC64974_45110-T1|organism=Aspergillus niger N402|type=mRNA|length=1401bp|location=Sequence derived from alignment at OGUI01000007.1:599588..600988+ (Aspergillus niger N402)
ATGAAGTTCAATACTGTCGCCCTCACCCTGGCTACCGCCGGCATGGTGTC
TGCTCAGCACCACCACCAGCACCGCCATCACCACAAGCGCTCCCCCGACA
CCGAGGTCGTCACGGTGCCCGGCCCTACCGTCACCACCTTCGTTCTCGAC
GGCAAGGTCATTACCTTCGAGGAGGCCTGCGATGGTGTCGCCAAGGGTAC
TTTGAAGTTCTCTGGCAACGTGCCTGCGAATGTTTGCCAGTCCTCCTCTT
CGACTGTGTCTTCGAGCACCACCAGCCCGACTCCCACGGCTTCCGTCCAG
GCTGCTGCTGAGTTCATCGAGGTCGCCGTCAACAAGCACTCGAGCAGCTC
CAGCTCCAGCTCCAGCAGCACCAAGACCAGCAGCTCGTACGCCGCTGCCT
CCTCCAGCTCCTCCGCCAGCAGCTCTAGCAGCAGCTCCTCCTCTGCCACC
GGCGTGGACAAGGAGTTCCCCGATGGCGAGCTTGACTGCGACACCTTCCC
CTCTGAATATGGTGCCGTTGCCCTCGACTACCTTGGCCTTGGTGGTTGGT
CCGGTATCCAGTACGTGACCATCGTCGACGAGATTGTCGATACCATCGTT
ACCGGTGTTACCGGCGACTCCTGCATTTCCGGAGCCATGTGCTCCTATGC
CTGCCCTGCCGGATACCAGAAGTCCCAGTGGCCCAGCACCCAGGGTTCTA
CCGGCCAGTCCGTTGGTGGTATTGAGTGCAAGAACGGCAAGCTCCACCTT
ACCAACAAGTCTCTGTCCAAGAAGCTTTGCATTGAGGGTGTTGGAGGTGT
CCACGTCCAGAACACCATGAGCGAGGAGGTCGCTGTTTGCCGTACCGACT
ACCCTGGTAAGCATTGAACTTCTCTTCCGACAGGTGGGTCCAAACAAAGA
TATTAACTCTGTCTGCAGGTACCGAATCCGAGACCATCCCTCTCGCTGTC
GCTGCCAACAGCGAACTTCACCCCCTGACTTGCCCCAACGGCGCCACCTA
CTACAAGTGGGAGAACCAGACCACTTCCGCTCAGTACTATGTTAACCCCA
AGGGTGTTTCCACCGAGACTGGTTGCCAGTGGGGTAACGGCAGCTCTCCT
ATCGGTAACTGGGCCCCTATCAACCTTGGTGTCGGTTACAACGATGGCAA
GTGGCTTTCTCTGTTCCAGAACAGCCCTACCACCACCACCAAGCTTGACT
TCAACGTGAAGATCGAGGGTGACAACCTCAGCGGTTCTTGCAAGTACGAG
GACGGTACCTTCTACTCCGAGTCTGGCTCCAACGACTCCGGTTGCACTGT
AAGTGCCCTTGCGTTTGTTTTTGGCTGGGACTTTTCGCTGATCATCATCT
CCTCTCCAGGTTGAGGTTCTCTCCGGTTCCGCCACCTATGTCTTCTACTA
A
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:599588..600988+

>ATCC64974_45110-T1 ID=ATCC64974_45110-T1|Name=ATCC64974_45110-T1|organism=Aspergillus niger N402|type=CDS|length=3834bp|location=Sequence derived from alignment at OGUI01000007.1:599588..600988+ (Aspergillus niger N402)
ATGAAGTTCAATACTGTCGCCCTCACCCTGGCTACCGCCGGCATGGTGTC
TGCTCAGCACCACCACCAGCACCGCCATCACCACAAGCGCTCCCCCGACA
CCGAGGTCGTCACGGTGCCCGGCCCTACCGTCACCACCTTCGTTCTCGAC
GGCAAGGTCATTACCTTCGAGGAGGCCTGCGATGGTGTCGCCAAGGGTAC
TTTGAAGTTCTCTGGCAACGTGCCTGCGAATGTTTGCCAGTCCTCCTCTT
CGACTGTGTCTTCGAGCACCACCAGCCCGACTCCCACGGCTTCCGTCCAG
GCTGCTGCTGAGTTCATCGAGGTCGCCGTCAACAAGCACTCGAGCAGCTC
CAGCTCCAGCTCCAGCAGCACCAAGACCAGCAGCTCGTACGCCGCTGCCT
CCTCCAGCTCCTCCGCCAGCAGCTCTAGCAGCAGCTCCTCCTCTGCCACC
GGCGTGGACAAGGAGTTCCCCGATGGCGAGCTTGACTGCGACACCTTCCC
CTCTGAATATGGTGCCGTTGCCCTCGACTACCTTGGCCTTGGTGGTTGGT
CCGGTATCCAGTACGTGACCATCGTCGACGAGATTGTCGATACCATCGTT
ACCGGTGTTACCGGCGACTCCTGCATTTCCGGAGCCATGTGCTCCTATGC
CTGCCCTGCCGGATACCAGAAGTCCCAGTGGCCCAGCACCCAGGGTTCTA
CCGGCCAGTCCGTTGGTGGTATTGAGTGCAAGAACGGCAAGCTCCACCTT
ACCAACAAGTCTCTGTCCAAGAAGCTTTGCATTGAGGGTGTTGGAGGTGT
CCACGTCCAGAACACCATGAGCGAGGAGGTCGCTGTTTGCCGTACCGACT
ACCCTGGTACCGAATCCGAGACCATCCCTCTCGCTGTCGCTGCCAACAGC
GAACTTCACCCCCTGACTTGCCCCAACGGCGCCACCTACTACAAGTGGGA
GAACCAGACCACTTCCGCTCAGTACTATGTTAACCCCAAGGGTGTTTCCA
CCGAGACTGGTTGCCAGTGGGGTAACGGCAGCTCTCCTATCGGTAACTGG
GCCCCTATCAACCTTGGTGTCGGTTACAACGATGGCAAGTGGCTTTCTCT
GTTCCAGAACAGCCCTACCACCACCACCAAGCTTGACTTCAACGTGAAGA
TCGAGGGTGACAACCTCAGCGGTTCTTGCAAGTACGAGGACGGTACCTTC
TACTCCGAGTCTGGCTCCAACGACTCCGGTTGCACTGTTGAGGTTCTCTC
CGGTTCCGCCACCTATGTCTTCTACTAAATGAAGTTCAATACTGTCGCCC
TCACCCTGGCTACCGCCGGCATGGTGTCTGCTCAGCACCACCACCAGCAC
CGCCATCACCACAAGCGCTCCCCCGACACCGAGGTCGTCACGGTGCCCGG
CCCTACCGTCACCACCTTCGTTCTCGACGGCAAGGTCATTACCTTCGAGG
AGGCCTGCGATGGTGTCGCCAAGGGTACTTTGAAGTTCTCTGGCAACGTG
CCTGCGAATGTTTGCCAGTCCTCCTCTTCGACTGTGTCTTCGAGCACCAC
CAGCCCGACTCCCACGGCTTCCGTCCAGGCTGCTGCTGAGTTCATCGAGG
TCGCCGTCAACAAGCACTCGAGCAGCTCCAGCTCCAGCTCCAGCAGCACC
AAGACCAGCAGCTCGTACGCCGCTGCCTCCTCCAGCTCCTCCGCCAGCAG
CTCTAGCAGCAGCTCCTCCTCTGCCACCGGCGTGGACAAGGAGTTCCCCG
ATGGCGAGCTTGACTGCGACACCTTCCCCTCTGAATATGGTGCCGTTGCC
CTCGACTACCTTGGCCTTGGTGGTTGGTCCGGTATCCAGTACGTGACCAT
CGTCGACGAGATTGTCGATACCATCGTTACCGGTGTTACCGGCGACTCCT
GCATTTCCGGAGCCATGTGCTCCTATGCCTGCCCTGCCGGATACCAGAAG
TCCCAGTGGCCCAGCACCCAGGGTTCTACCGGCCAGTCCGTTGGTGGTAT
TGAGTGCAAGAACGGCAAGCTCCACCTTACCAACAAGTCTCTGTCCAAGA
AGCTTTGCATTGAGGGTGTTGGAGGTGTCCACGTCCAGAACACCATGAGC
GAGGAGGTCGCTGTTTGCCGTACCGACTACCCTGGTACCGAATCCGAGAC
CATCCCTCTCGCTGTCGCTGCCAACAGCGAACTTCACCCCCTGACTTGCC
CCAACGGCGCCACCTACTACAAGTGGGAGAACCAGACCACTTCCGCTCAG
TACTATGTTAACCCCAAGGGTGTTTCCACCGAGACTGGTTGCCAGTGGGG
TAACGGCAGCTCTCCTATCGGTAACTGGGCCCCTATCAACCTTGGTGTCG
GTTACAACGATGGCAAGTGGCTTTCTCTGTTCCAGAACAGCCCTACCACC
ACCACCAAGCTTGACTTCAACGTGAAGATCGAGGGTGACAACCTCAGCGG
TTCTTGCAAGTACGAGGACGGTACCTTCTACTCCGAGTCTGGCTCCAACG
ACTCCGGTTGCACTGTTGAGGTTCTCTCCGGTTCCGCCACCTATGTCTTC
TACTAAATGAAGTTCAATACTGTCGCCCTCACCCTGGCTACCGCCGGCAT
GGTGTCTGCTCAGCACCACCACCAGCACCGCCATCACCACAAGCGCTCCC
CCGACACCGAGGTCGTCACGGTGCCCGGCCCTACCGTCACCACCTTCGTT
CTCGACGGCAAGGTCATTACCTTCGAGGAGGCCTGCGATGGTGTCGCCAA
GGGTACTTTGAAGTTCTCTGGCAACGTGCCTGCGAATGTTTGCCAGTCCT
CCTCTTCGACTGTGTCTTCGAGCACCACCAGCCCGACTCCCACGGCTTCC
GTCCAGGCTGCTGCTGAGTTCATCGAGGTCGCCGTCAACAAGCACTCGAG
CAGCTCCAGCTCCAGCTCCAGCAGCACCAAGACCAGCAGCTCGTACGCCG
CTGCCTCCTCCAGCTCCTCCGCCAGCAGCTCTAGCAGCAGCTCCTCCTCT
GCCACCGGCGTGGACAAGGAGTTCCCCGATGGCGAGCTTGACTGCGACAC
CTTCCCCTCTGAATATGGTGCCGTTGCCCTCGACTACCTTGGCCTTGGTG
GTTGGTCCGGTATCCAGTACGTGACCATCGTCGACGAGATTGTCGATACC
ATCGTTACCGGTGTTACCGGCGACTCCTGCATTTCCGGAGCCATGTGCTC
CTATGCCTGCCCTGCCGGATACCAGAAGTCCCAGTGGCCCAGCACCCAGG
GTTCTACCGGCCAGTCCGTTGGTGGTATTGAGTGCAAGAACGGCAAGCTC
CACCTTACCAACAAGTCTCTGTCCAAGAAGCTTTGCATTGAGGGTGTTGG
AGGTGTCCACGTCCAGAACACCATGAGCGAGGAGGTCGCTGTTTGCCGTA
CCGACTACCCTGGTACCGAATCCGAGACCATCCCTCTCGCTGTCGCTGCC
AACAGCGAACTTCACCCCCTGACTTGCCCCAACGGCGCCACCTACTACAA
GTGGGAGAACCAGACCACTTCCGCTCAGTACTATGTTAACCCCAAGGGTG
TTTCCACCGAGACTGGTTGCCAGTGGGGTAACGGCAGCTCTCCTATCGGT
AACTGGGCCCCTATCAACCTTGGTGTCGGTTACAACGATGGCAAGTGGCT
TTCTCTGTTCCAGAACAGCCCTACCACCACCACCAAGCTTGACTTCAACG
TGAAGATCGAGGGTGACAACCTCAGCGGTTCTTGCAAGTACGAGGACGGT
ACCTTCTACTCCGAGTCTGGCTCCAACGACTCCGGTTGCACTGTTGAGGT
TCTCTCCGGTTCCGCCACCTATGTCTTCTACTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SUN1ATCC64974_45110Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_45110-T1.exon1ATCC64974_45110-T1.exon1Aspergillus niger N402exon
ATCC64974_45110-T1.exon2ATCC64974_45110-T1.exon2Aspergillus niger N402exon
ATCC64974_45110-T1.exon3ATCC64974_45110-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_45110-T1.cdsATCC64974_45110-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_45110-T1ATCC64974_45110-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:GH132
DBxrefInterPro:IPR005556
DBxrefPFAM:PF03856
ProductSecreted beta-glucosidase sun1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:599588..600988 +
Powered by Drupal