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ATCC64974_45240-T1, ATCC64974_45240-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_45240-T1
Unique NameATCC64974_45240-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:644273..645610-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_45240-T1 ID=ATCC64974_45240-T1|Name=ATCC64974_45240-T1|organism=Aspergillus niger N402|type=mRNA|length=1338bp|location=Sequence derived from alignment at OGUI01000007.1:644273..645610- (Aspergillus niger N402)
ATGAGCTCTGCATCAACACCACCCTCCGCTGTGGTCAATCTTTTCGGTAA
CAATAACCGCAAGTACCCTCCTCGTCTTCCCCGGACATGCAATCTAACCA
AGCTCCCTATCATCTACAGATGGCACAATGTCCCCGACACAGACGAATGG
CGCTGCGTTCTCCACGGCCGTCTCCTCTCTCTAAAACAAGACCCAACTCA
CCTCTACTACCGAACCTACCGCACCACCCAATCCCCCAAACCCAAAATAA
ATGACGACGATACCACCCTCTCCCTCCTAACCCACTACTTCAACCTCTCC
GCCAACCTCACCTCCCTCTACACCGAATGGTCCGCCCAAGACCCCAATTT
CCGCAAGAAGGCCCCTCAATTCACCGGCATCCGCATCCTGCGCCAAGATG
CCTGGGAAGCCCTGATCTCCTTCATCTGCAGCAGCAACAACAACATCGCG
CGCATCTCGCAGATGGTCGAGAAGCTCTGCCTAAACTACGGTCCCTTCAT
TGCGTCCATCAATGGCCGCGCCTATCACGGTTTCCCGGCTCCGAATGCCC
TCACCGCTCACGACGTGGAGGGTAAGCTGCGCGGGTTGGGGTTCGGGTAC
CGTGCCAAATATATCTATCAGACGGCGGTGATGGTGGCCAAGGAGCGAGA
GAGCGGGTGGTTGGATTCGTTATGTAACCCAGAGTGTCCGGCTTGGGGGG
TGGAAGCTGCACCGGCGGGTGAAATGAAGCCCGAGGGGAGGGAAGGGTAT
CGGGAGGCGCATGAGAAGTTGCTTGAGTTGCAGGGGGTTGGGCCGAAGGT
CGCTGATTGCGTGTGCTTGATGGGGCTGGGATGGGGGGAGGCAGTTCCGG
TTGATACGCATGGTTTGTTACCTCGGTTGATCCCTTTGTCACGTCACATT
TGATTGCTAATGGTCTTTGGTTTAGTCTGGCAAATCGCGCAGAGAGACTA
CAAGTTTGGAAAGGGCGGTAATAAGTCCCTGACGAAGGTTACTTATGATG
CCGTGGGAAACCATTTCCGCAAGCTCTGGGGCAAAGAAGCGGGGTGGGCG
CATAGTGTGCTGTTCACGGCTGATCTGAGGACCTTTTCGGATCGATTGGC
TGCTACTACGTCGAAGAAGGTGGATGTGAAGGTAGAGAAGGATGACAAGG
AGGGTGTCGAGGTGGAGACAAAGGTCACCACGGCGATTGCGGTGCCTACC
AAGAGACCTATAGATGAGGAGGGGGTGAAGGCTGAAGAAGAAGATGAAAC
TAAAGAGAAGGAGAAGCTGAACACCATCGTACAAGCTTCACAGACAACGA
CGGCAAGGAGGATGTCGAAGCGACTTCGCAAGAAATGA
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Coding sequence (CDS) from alignment at OGUI01000007.1:644273..645610-

>ATCC64974_45240-T1 ID=ATCC64974_45240-T1|Name=ATCC64974_45240-T1|organism=Aspergillus niger N402|type=CDS|length=2550bp|location=Sequence derived from alignment at OGUI01000007.1:644273..645610- (Aspergillus niger N402)
TCTGGCAAATCGCGCAGAGAGACTACAAGTTTGGAAAGGGCGGTAATAAG
TCCCTGACGAAGGTTACTTATGATGCCGTGGGAAACCATTTCCGCAAGCT
CTGGGGCAAAGAAGCGGGGTGGGCGCATAGTGTGCTGTTCACGGCTGATC
TGAGGACCTTTTCGGATCGATTGGCTGCTACTACGTCGAAGAAGGTGGAT
GTGAAGGTAGAGAAGGATGACAAGGAGGGTGTCGAGGTGGAGACAAAGGT
CACCACGGCGATTGCGGTGCCTACCAAGAGACCTATAGATGAGGAGGGGG
TGAAGGCTGAAGAAGAAGATGAAACTAAAGAGAAGGAGAAGCTGAACACC
ATCGTACAAGCTTCACAGACAACGACGGCAAGGAGGATGTCGAAGCGACT
TCGCAAGAAATGAATGAGCTCTGCATCAACACCACCCTCCGCTGTGGTCA
ATCTTTTCGGTAACAATAACCGCAAGTACCCTCCTCGTCTTCCCCGGACA
TGCAATCTAACCAAGCTCCCTATCATCTACAGATGGCACAATGTCCCCGA
CACAGACGAATGGCGCTGCGTTCTCCACGGCCGTCTCCTCTCTCTAAAAC
AAGACCCAACTCACCTCTACTACCGAACCTACCGCACCACCCAATCCCCC
AAACCCAAAATAAATGACGACGATACCACCCTCTCCCTCCTAACCCACTA
CTTCAACCTCTCCGCCAACCTCACCTCCCTCTACACCGAATGGTCCGCCC
AAGACCCCAATTTCCGCAAGAAGGCCCCTCAATTCACCGGCATCCGCATC
CTGCGCCAAGATGCCTGGGAAGCCCTGATCTCCTTCATCTGCAGCAGCAA
CAACAACATCGCGCGCATCTCGCAGATGGTCGAGAAGCTCTGCCTAAACT
ACGGTCCCTTCATTGCGTCCATCAATGGCCGCGCCTATCACGGTTTCCCG
GCTCCGAATGCCCTCACCGCTCACGACGTGGAGGGTAAGCTGCGCGGGTT
GGGGTTCGGGTACCGTGCCAAATATATCTATCAGACGGCGGTGATGGTGG
CCAAGGAGCGAGAGAGCGGGTGGTTGGATTCGTTATGTAACCCAGAGTGT
CCGGCTTGGGGGGTGGAAGCTGCACCGGCGGGTGAAATGAAGCCCGAGGG
GAGGGAAGGGTATCGGGAGGCGCATGAGAAGTTGCTTGAGTTGCAGGGGG
TTGGGCCGAAGGTCGCTGATTGCGTGTGCTTGATGGGGCTGGGATGGGGG
GAGGCAGTTCCGGTTGATACGCATGTCTGGCAAATCGCGCAGAGAGACTA
CAAGTTTGGAAAGGGCGGTAATAAGTCCCTGACGAAGGTTACTTATGATG
CCGTGGGAAACCATTTCCGCAAGCTCTGGGGCAAAGAAGCGGGGTGGGCG
CATAGTGTGCTGTTCACGGCTGATCTGAGGACCTTTTCGGATCGATTGGC
TGCTACTACGTCGAAGAAGGTGGATGTGAAGGTAGAGAAGGATGACAAGG
AGGGTGTCGAGGTGGAGACAAAGGTCACCACGGCGATTGCGGTGCCTACC
AAGAGACCTATAGATGAGGAGGGGGTGAAGGCTGAAGAAGAAGATGAAAC
TAAAGAGAAGGAGAAGCTGAACACCATCGTACAAGCTTCACAGACAACGA
CGGCAAGGAGGATGTCGAAGCGACTTCGCAAGAAATGAATGAGCTCTGCA
TCAACACCACCCTCCGCTGTGGTCAATCTTTTCGGTAACAATAACCGCAA
GTACCCTCCTCGTCTTCCCCGGACATGCAATCTAACCAAGCTCCCTATCA
TCTACAGATGGCACAATGTCCCCGACACAGACGAATGGCGCTGCGTTCTC
CACGGCCGTCTCCTCTCTCTAAAACAAGACCCAACTCACCTCTACTACCG
AACCTACCGCACCACCCAATCCCCCAAACCCAAAATAAATGACGACGATA
CCACCCTCTCCCTCCTAACCCACTACTTCAACCTCTCCGCCAACCTCACC
TCCCTCTACACCGAATGGTCCGCCCAAGACCCCAATTTCCGCAAGAAGGC
CCCTCAATTCACCGGCATCCGCATCCTGCGCCAAGATGCCTGGGAAGCCC
TGATCTCCTTCATCTGCAGCAGCAACAACAACATCGCGCGCATCTCGCAG
ATGGTCGAGAAGCTCTGCCTAAACTACGGTCCCTTCATTGCGTCCATCAA
TGGCCGCGCCTATCACGGTTTCCCGGCTCCGAATGCCCTCACCGCTCACG
ACGTGGAGGGTAAGCTGCGCGGGTTGGGGTTCGGGTACCGTGCCAAATAT
ATCTATCAGACGGCGGTGATGGTGGCCAAGGAGCGAGAGAGCGGGTGGTT
GGATTCGTTATGTAACCCAGAGTGTCCGGCTTGGGGGGTGGAAGCTGCAC
CGGCGGGTGAAATGAAGCCCGAGGGGAGGGAAGGGTATCGGGAGGCGCAT
GAGAAGTTGCTTGAGTTGCAGGGGGTTGGGCCGAAGGTCGCTGATTGCGT
GTGCTTGATGGGGCTGGGATGGGGGGAGGCAGTTCCGGTTGATACGCATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0008534oxidized purine nucleobase lesion DNA N-glycosylase activity
GO:0003684damaged DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006289nucleotide-excision repair
GO:0006284base-excision repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_45240ATCC64974_45240Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_45240-T1ATCC64974_45240-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_45240-T1.cdsATCC64974_45240-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_45240-T1.exon2ATCC64974_45240-T1.exon2Aspergillus niger N402exon
ATCC64974_45240-T1.exon1ATCC64974_45240-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG092628HC
DBxrefInterPro:IPR011257
DBxrefInterPro:IPR012904
DBxrefInterPro:IPR023170
DBxrefInterPro:IPR003265
DBxrefPFAM:PF07934
DBxrefPFAM:PF00730
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:644273..645610 -
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