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ATCC64974_45470-T1, ATCC64974_45470-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_45470-T1
Unique NameATCC64974_45470-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:719292..720053+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_45470-T1 ID=ATCC64974_45470-T1|Name=ATCC64974_45470-T1|organism=Aspergillus niger N402|type=mRNA|length=762bp|location=Sequence derived from alignment at OGUI01000007.1:719292..720053+ (Aspergillus niger N402)
ATGCTCTCTCAGAAGGTTGCTCAGCAATCGTTGCGGCGGCGTACGTACTC
ACATCATCCTCTTCAGCTAATCGCGCGACACTGACTTCAATGTTGCAGTT
GCCGTCCAGCAGCCCTACGCTCTGCGTTGGTCTTTGATGAACTCGGTTTC
TCCGGCTGCCGTTGCTCTTGGAAGAACCGTTCAGACTAGGTAAGCTACTA
CGCGTGATTGGGATTCTTATTTGCGACTATTTCGACTTGGGAGGGGTTCG
CGATATCGAACTCGACGTCATGAAGCGAATGTCGCTAAGTGGAGGCGGAA
CACGAATTGCTAACGTTGTCATGCAGACATGCTGCTACCTCCTCCAACTC
CTCCGACCCTACCAAGCTCCTCGCCCAGCAGCGTCTCAACCGCCCCGTCT
CTCCCCACCTTAGCATCTACCGTCCCCAGATCACATGGATCGGCAGTAGT
ATCCACCGTATCACCGGTATTGCGCTGTCCGGAAGTCTCTACCTCTATGC
CAGTGCCTACCTCGCCTCTCCCATGCTCGGCTGGGATCTGGGCTCTGCCT
CCGCCGCCGCCGCTTTCGCCGCTCTCCCTGTTGTCGCCAAGGTTGCCCTG
AAGACTACCATGGCCCTGCCTTTCACCTACCACTGCATGAACGGCGTGCG
CCACCTCATTTGGGATACTGGTGCTGGTCTTACCAACCCCCAGGTCATCA
AGTCCGGCTGGACTGTGGTGGGTTTGAGTACTCTTAGCGCTCTTATTCTT
GCTTTCCTGTGA
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Coding sequence (CDS) from alignment at OGUI01000007.1:719292..720053+

>ATCC64974_45470-T1 ID=ATCC64974_45470-T1|Name=ATCC64974_45470-T1|organism=Aspergillus niger N402|type=CDS|length=1701bp|location=Sequence derived from alignment at OGUI01000007.1:719292..720053+ (Aspergillus niger N402)
ATGCTCTCTCAGAAGGTTGCTCAGCAATCGTTGCGGCGGCTTGCCGTCCA
GCAGCCCTACGCTCTGCGTTGGTCTTTGATGAACTCGGTTTCTCCGGCTG
CCGTTGCTCTTGGAAGAACCGTTCAGACTAGACATGCTGCTACCTCCTCC
AACTCCTCCGACCCTACCAAGCTCCTCGCCCAGCAGCGTCTCAACCGCCC
CGTCTCTCCCCACCTTAGCATCTACCGTCCCCAGATCACATGGATCGGCA
GTAGTATCCACCGTATCACCGGTATTGCGCTGTCCGGAAGTCTCTACCTC
TATGCCAGTGCCTACCTCGCCTCTCCCATGCTCGGCTGGGATCTGGGCTC
TGCCTCCGCCGCCGCCGCTTTCGCCGCTCTCCCTGTTGTCGCCAAGGTTG
CCCTGAAGACTACCATGGCCCTGCCTTTCACCTACCACTGCATGAACGGC
GTGCGCCACCTCATTTGGGATACTGGTGCTGGTCTTACCAACCCCCAGGT
CATCAAGTCCGGCTGGACTGTGGTGGGTTTGAGTACTCTTAGCGCTCTTA
TTCTTGCTTTCCTGTGAATGCTCTCTCAGAAGGTTGCTCAGCAATCGTTG
CGGCGGCTTGCCGTCCAGCAGCCCTACGCTCTGCGTTGGTCTTTGATGAA
CTCGGTTTCTCCGGCTGCCGTTGCTCTTGGAAGAACCGTTCAGACTAGAC
ATGCTGCTACCTCCTCCAACTCCTCCGACCCTACCAAGCTCCTCGCCCAG
CAGCGTCTCAACCGCCCCGTCTCTCCCCACCTTAGCATCTACCGTCCCCA
GATCACATGGATCGGCAGTAGTATCCACCGTATCACCGGTATTGCGCTGT
CCGGAAGTCTCTACCTCTATGCCAGTGCCTACCTCGCCTCTCCCATGCTC
GGCTGGGATCTGGGCTCTGCCTCCGCCGCCGCCGCTTTCGCCGCTCTCCC
TGTTGTCGCCAAGGTTGCCCTGAAGACTACCATGGCCCTGCCTTTCACCT
ACCACTGCATGAACGGCGTGCGCCACCTCATTTGGGATACTGGTGCTGGT
CTTACCAACCCCCAGGTCATCAAGTCCGGCTGGACTGTGGTGGGTTTGAG
TACTCTTAGCGCTCTTATTCTTGCTTTCCTGTGAATGCTCTCTCAGAAGG
TTGCTCAGCAATCGTTGCGGCGGCTTGCCGTCCAGCAGCCCTACGCTCTG
CGTTGGTCTTTGATGAACTCGGTTTCTCCGGCTGCCGTTGCTCTTGGAAG
AACCGTTCAGACTAGACATGCTGCTACCTCCTCCAACTCCTCCGACCCTA
CCAAGCTCCTCGCCCAGCAGCGTCTCAACCGCCCCGTCTCTCCCCACCTT
AGCATCTACCGTCCCCAGATCACATGGATCGGCAGTAGTATCCACCGTAT
CACCGGTATTGCGCTGTCCGGAAGTCTCTACCTCTATGCCAGTGCCTACC
TCGCCTCTCCCATGCTCGGCTGGGATCTGGGCTCTGCCTCCGCCGCCGCC
GCTTTCGCCGCTCTCCCTGTTGTCGCCAAGGTTGCCCTGAAGACTACCAT
GGCCCTGCCTTTCACCTACCACTGCATGAACGGCGTGCGCCACCTCATTT
GGGATACTGGTGCTGGTCTTACCAACCCCCAGGTCATCAAGTCCGGCTGG
ACTGTGGTGGGTTTGAGTACTCTTAGCGCTCTTATTCTTGCTTTCCTGTG
A
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0045281succinate dehydrogenase complex
Vocabulary: Biological Process
TermDefinition
GO:0006099tricarboxylic acid cycle
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron transfer activity
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
GO:0000104succinate dehydrogenase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_45470ATCC64974_45470Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_45470-T1.exon1ATCC64974_45470-T1.exon1Aspergillus niger N402exon
ATCC64974_45470-T1.exon2ATCC64974_45470-T1.exon2Aspergillus niger N402exon
ATCC64974_45470-T1.exon3ATCC64974_45470-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_45470-T1.cdsATCC64974_45470-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_45470-T1ATCC64974_45470-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR018495
DBxrefInterPro:IPR034804
DBxrefInterPro:IPR000701
DBxrefInterPro:IPR014314
DBxrefPFAM:PF01127
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:719292..720053 +
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