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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000007.1:787620..788499+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_45720-T1 ID=ATCC64974_45720-T1|Name=ATCC64974_45720-T1|organism=Aspergillus niger N402|type=mRNA|length=880bp|location=Sequence derived from alignment at OGUI01000007.1:787620..788499+ (Aspergillus niger N402) ATGGCGTCTTCTTCCCCGATCCTGCAGCAGCTGGGCTGCTTCCGGTCCCT
CCTCCTGAAGCCCCAGTCCCTGTCGTCCACCGTCAACAACCAGATCGGTC
GCCGTGCGCTCAGCACCGTCTACTCCGCGAAGCCTGAGCCCAAGCCTCTC
CCTAAGAACCTGCCGGAGCAGTTCCTTCGTCAATTACCGCTTCGCATGCG
GCCGAATCCTGGTATGGACTGAACTAACTCATTTTTTGCTTGGACTTGCG
TCCGTCTCGAGTTACCGATGCTTGCTTTACCCGGATCATATATCTAACAT
GTTTAATGAATGATATGCAGAGCGCAAAGAACGCAAGATCCCTCCTCCGC
CGCCGGCCCCTCAGTGCAAGGACCCCGTGAACGCCGTGCAGGAGGCCCAA
TTGGCGCAGCTGGACCCTACAGGCGAGCGCCGCGCTCTTTTCGACTACAG
ACGGAGTCCTCGCAGTGTCAAGGTCGGAGATGTTTTGCGGGTGACGTTCA
AGAACGGAGATCCGTTCTCCGGAGTGTGTTTGAGCATTCGGTTGCGCGGC
ATTGATACGTCGTTCTTGTTGCGGAACCAGTTGACGAGAGTTGGAGTCGA
GATGTCCATCAAGGTGTTCAGTCCTAATGTTGAGAGTGTGGAGATTGTGC
AGAGGGCGGAGAAGAGAAAGAGACGCGCGAGGTTGTATTACATGAGGTGC
GTATTAATTTCTTTGTGGATAGTGGATTGTATTGGATGGGAAGGCTAACG
AGATCTCCTTCGGGTTTATAGGAAGCCCAAGCACGACATGGGCAGCGTCG
AGAACCTCGTTGCGAACTACCTCCGGCAGAAGAGATCGCTTACCGGCAAG
AGGGGCGGTGGCCAGACGAAGAGACGGTAG back to topCoding sequence (CDS) from alignment at OGUI01000007.1:787620..788499+ >ATCC64974_45720-T1 ID=ATCC64974_45720-T1|Name=ATCC64974_45720-T1|organism=Aspergillus niger N402|type=CDS|length=2088bp|location=Sequence derived from alignment at OGUI01000007.1:787620..788499+ (Aspergillus niger N402) ATGGCGTCTTCTTCCCCGATCCTGCAGCAGCTGGGCTGCTTCCGGTCCCT CCTCCTGAAGCCCCAGTCCCTGTCGTCCACCGTCAACAACCAGATCGGTC GCCGTGCGCTCAGCACCGTCTACTCCGCGAAGCCTGAGCCCAAGCCTCTC CCTAAGAACCTGCCGGAGCAGTTCCTTCGTCAATTACCGCTTCGCATGCG GCCGAATCCTGAGCGCAAAGAACGCAAGATCCCTCCTCCGCCGCCGGCCC CTCAGTGCAAGGACCCCGTGAACGCCGTGCAGGAGGCCCAATTGGCGCAG CTGGACCCTACAGGCGAGCGCCGCGCTCTTTTCGACTACAGACGGAGTCC TCGCAGTGTCAAGGTCGGAGATGTTTTGCGGGTGACGTTCAAGAACGGAG ATCCGTTCTCCGGAGTGTGTTTGAGCATTCGGTTGCGCGGCATTGATACG TCGTTCTTGTTGCGGAACCAGTTGACGAGAGTTGGAGTCGAGATGTCCAT CAAGGTGTTCAGTCCTAATGTTGAGAGTGTGGAGATTGTGCAGAGGGCGG AGAAGAGAAAGAGACGCGCGAGGTTGTATTACATGAGGAAGCCCAAGCAC GACATGGGCAGCGTCGAGAACCTCGTTGCGAACTACCTCCGGCAGAAGAG ATCGCTTACCGGCAAGAGGGGCGGTGGCCAGACGAAGAGACGGTAGATGG CGTCTTCTTCCCCGATCCTGCAGCAGCTGGGCTGCTTCCGGTCCCTCCTC CTGAAGCCCCAGTCCCTGTCGTCCACCGTCAACAACCAGATCGGTCGCCG TGCGCTCAGCACCGTCTACTCCGCGAAGCCTGAGCCCAAGCCTCTCCCTA AGAACCTGCCGGAGCAGTTCCTTCGTCAATTACCGCTTCGCATGCGGCCG AATCCTGAGCGCAAAGAACGCAAGATCCCTCCTCCGCCGCCGGCCCCTCA GTGCAAGGACCCCGTGAACGCCGTGCAGGAGGCCCAATTGGCGCAGCTGG ACCCTACAGGCGAGCGCCGCGCTCTTTTCGACTACAGACGGAGTCCTCGC AGTGTCAAGGTCGGAGATGTTTTGCGGGTGACGTTCAAGAACGGAGATCC GTTCTCCGGAGTGTGTTTGAGCATTCGGTTGCGCGGCATTGATACGTCGT TCTTGTTGCGGAACCAGTTGACGAGAGTTGGAGTCGAGATGTCCATCAAG GTGTTCAGTCCTAATGTTGAGAGTGTGGAGATTGTGCAGAGGGCGGAGAA GAGAAAGAGACGCGCGAGGTTGTATTACATGAGGAAGCCCAAGCACGACA TGGGCAGCGTCGAGAACCTCGTTGCGAACTACCTCCGGCAGAAGAGATCG CTTACCGGCAAGAGGGGCGGTGGCCAGACGAAGAGACGGTAGATGGCGTC TTCTTCCCCGATCCTGCAGCAGCTGGGCTGCTTCCGGTCCCTCCTCCTGA AGCCCCAGTCCCTGTCGTCCACCGTCAACAACCAGATCGGTCGCCGTGCG CTCAGCACCGTCTACTCCGCGAAGCCTGAGCCCAAGCCTCTCCCTAAGAA CCTGCCGGAGCAGTTCCTTCGTCAATTACCGCTTCGCATGCGGCCGAATC CTGAGCGCAAAGAACGCAAGATCCCTCCTCCGCCGCCGGCCCCTCAGTGC AAGGACCCCGTGAACGCCGTGCAGGAGGCCCAATTGGCGCAGCTGGACCC TACAGGCGAGCGCCGCGCTCTTTTCGACTACAGACGGAGTCCTCGCAGTG TCAAGGTCGGAGATGTTTTGCGGGTGACGTTCAAGAACGGAGATCCGTTC TCCGGAGTGTGTTTGAGCATTCGGTTGCGCGGCATTGATACGTCGTTCTT GTTGCGGAACCAGTTGACGAGAGTTGGAGTCGAGATGTCCATCAAGGTGT TCAGTCCTAATGTTGAGAGTGTGGAGATTGTGCAGAGGGCGGAGAAGAGA AAGAGACGCGCGAGGTTGTATTACATGAGGAAGCCCAAGCACGACATGGG CAGCGTCGAGAACCTCGTTGCGAACTACCTCCGGCAGAAGAGATCGCTTA CCGGCAAGAGGGGCGGTGGCCAGACGAAGAGACGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005840 | ribosome |
Vocabulary: Biological Process
Term | Definition |
GO:0006412 | translation |
Vocabulary: Molecular Function
Term | Definition |
GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
ATCC64974_45720-T1 | ATCC64974_45720-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
Property Name | Value |
Note | EggNog:ENOG41 |
Note | BUSCO:EOG09264I6B |
DBxref | InterPro:IPR008991 |
DBxref | InterPro:IPR038657 |
DBxref | InterPro:IPR001857 |
DBxref | PFAM:PF01245 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
OGUI01000007.1 | supercontig | OGUI01000007.1:787620..788499 + |
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