You are here

Home

ATCC64974_45950-T1, ATCC64974_45950-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_45950-T1
Unique NameATCC64974_45950-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:853243..854200-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_45950-T1 ID=ATCC64974_45950-T1|Name=ATCC64974_45950-T1|organism=Aspergillus niger N402|type=mRNA|length=958bp|location=Sequence derived from alignment at OGUI01000007.1:853243..854200- (Aspergillus niger N402)
ATGGTCAAGGCTGGTAGGTACCTGCACTTTTCTTCAGCCCTTTTGGTTTT
TCTATTCTGCTATTGGCCTTAACCCCCTCCACGGATCCACGATCGACCGT
GGCCGGGGGACCTTGAGTGAGCAGATTTGAGCACCTTGCGATCCCTCCTG
CACCTATCACGGTCTGGGGACCCTGTTTGCCAGCCGGACAAGCTCAGGGG
GATTCGGTGACATCTGCCAGCTCATTCGTCCCCCGTCAGCTGGAGCTTTG
TTTTATCTTTCGTATTAATAGTACCACGATTCAAGTCTGGTTGATGGCCG
GTGATCGTTGGATCTCGTGGTTCTGGAAGGTTTCCATCAATGCAAATCAT
GGGCTGACATCCATCTCTTAGTCGCTGTTATCCGTGGAGACTCTAAGGTC
TCCGGCACTGTCACTTTCGAGCAGGCCAACGAGAACACCCCCACCACCAT
CTCCTGGAACATCACTGGCCACGACGCCAACGCTGAGCGTGGCTTCCACG
TCCACCAGTTCGGTGACAACACCAACGGCTGCACCTCCGCTGGCCCTCAC
TTCAACCCCTTCGGCAAGACCCACGGTGCTCCCGAGGACGACGAGCGTCA
CGTCGGTGACCTTGGCAACTTCAAGACCGATGCCGAGGGTAACGCCGTTG
GTTCCAAGCAGGACAAGCTGGTGAAGCTCATCGGTGCTGAGAGCGTCCTG
GGCGTACGTTTTATCCCTCCCCTTCTTGCTCATAGTCTTTGTAAAGATGC
TAATGCAATGGATACAGCGGACCCTGGTCGTCCACGCTGGTACTGATGAC
CTTGGCCGTGGTGGCAACGAGGAGTCCAAGAAGACCGGTAACGCTGGTCC
TCGTCCCGCTTGCGGTAAGCTTATCCCTACCACGATACCCCATCTACTTT
ACTTGAACATTGTTTGCTGATTTCGTCTGTCACAGGTGTCATTGGCATTG
CTGCTTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:853243..854200-

>ATCC64974_45950-T1 ID=ATCC64974_45950-T1|Name=ATCC64974_45950-T1|organism=Aspergillus niger N402|type=CDS|length=1860bp|location=Sequence derived from alignment at OGUI01000007.1:853243..854200- (Aspergillus niger N402)
GTGTCATTGGCATTGCTGCTTAACGGACCCTGGTCGTCCACGCTGGTACT
GATGACCTTGGCCGTGGTGGCAACGAGGAGTCCAAGAAGACCGGTAACGC
TGGTCCTCGTCCCGCTTGCGTCGCTGTTATCCGTGGAGACTCTAAGGTCT
CCGGCACTGTCACTTTCGAGCAGGCCAACGAGAACACCCCCACCACCATC
TCCTGGAACATCACTGGCCACGACGCCAACGCTGAGCGTGGCTTCCACGT
CCACCAGTTCGGTGACAACACCAACGGCTGCACCTCCGCTGGCCCTCACT
TCAACCCCTTCGGCAAGACCCACGGTGCTCCCGAGGACGACGAGCGTCAC
GTCGGTGACCTTGGCAACTTCAAGACCGATGCCGAGGGTAACGCCGTTGG
TTCCAAGCAGGACAAGCTGGTGAAGCTCATCGGTGCTGAGAGCGTCCTGG
GCATGGTCAAGGCTGGTGTCATTGGCATTGCTGCTTAACGGACCCTGGTC
GTCCACGCTGGTACTGATGACCTTGGCCGTGGTGGCAACGAGGAGTCCAA
GAAGACCGGTAACGCTGGTCCTCGTCCCGCTTGCGTCGCTGTTATCCGTG
GAGACTCTAAGGTCTCCGGCACTGTCACTTTCGAGCAGGCCAACGAGAAC
ACCCCCACCACCATCTCCTGGAACATCACTGGCCACGACGCCAACGCTGA
GCGTGGCTTCCACGTCCACCAGTTCGGTGACAACACCAACGGCTGCACCT
CCGCTGGCCCTCACTTCAACCCCTTCGGCAAGACCCACGGTGCTCCCGAG
GACGACGAGCGTCACGTCGGTGACCTTGGCAACTTCAAGACCGATGCCGA
GGGTAACGCCGTTGGTTCCAAGCAGGACAAGCTGGTGAAGCTCATCGGTG
CTGAGAGCGTCCTGGGCATGGTCAAGGCTGGTGTCATTGGCATTGCTGCT
TAACGGACCCTGGTCGTCCACGCTGGTACTGATGACCTTGGCCGTGGTGG
CAACGAGGAGTCCAAGAAGACCGGTAACGCTGGTCCTCGTCCCGCTTGCG
TCGCTGTTATCCGTGGAGACTCTAAGGTCTCCGGCACTGTCACTTTCGAG
CAGGCCAACGAGAACACCCCCACCACCATCTCCTGGAACATCACTGGCCA
CGACGCCAACGCTGAGCGTGGCTTCCACGTCCACCAGTTCGGTGACAACA
CCAACGGCTGCACCTCCGCTGGCCCTCACTTCAACCCCTTCGGCAAGACC
CACGGTGCTCCCGAGGACGACGAGCGTCACGTCGGTGACCTTGGCAACTT
CAAGACCGATGCCGAGGGTAACGCCGTTGGTTCCAAGCAGGACAAGCTGG
TGAAGCTCATCGGTGCTGAGAGCGTCCTGGGCATGGTCAAGGCTGGTGTC
ATTGGCATTGCTGCTTAACGGACCCTGGTCGTCCACGCTGGTACTGATGA
CCTTGGCCGTGGTGGCAACGAGGAGTCCAAGAAGACCGGTAACGCTGGTC
CTCGTCCCGCTTGCGTCGCTGTTATCCGTGGAGACTCTAAGGTCTCCGGC
ACTGTCACTTTCGAGCAGGCCAACGAGAACACCCCCACCACCATCTCCTG
GAACATCACTGGCCACGACGCCAACGCTGAGCGTGGCTTCCACGTCCACC
AGTTCGGTGACAACACCAACGGCTGCACCTCCGCTGGCCCTCACTTCAAC
CCCTTCGGCAAGACCCACGGTGCTCCCGAGGACGACGAGCGTCACGTCGG
TGACCTTGGCAACTTCAAGACCGATGCCGAGGGTAACGCCGTTGGTTCCA
AGCAGGACAAGCTGGTGAAGCTCATCGGTGCTGAGAGCGTCCTGGGCATG
GTCAAGGCTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004784superoxide dismutase activity
GO:0046872metal ion binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006801superoxide metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_45950ATCC64974_45950Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_45950-T1ATCC64974_45950-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_45950-T1.cdsATCC64974_45950-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_45950-T1.exon4ATCC64974_45950-T1.exon4Aspergillus niger N402exon
ATCC64974_45950-T1.exon3ATCC64974_45950-T1.exon3Aspergillus niger N402exon
ATCC64974_45950-T1.exon2ATCC64974_45950-T1.exon2Aspergillus niger N402exon
ATCC64974_45950-T1.exon1ATCC64974_45950-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR018152
DBxrefInterPro:IPR036423
DBxrefInterPro:IPR001424
DBxrefPFAM:PF00080
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:853243..854200 -
Powered by Drupal