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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000007.1:1095118..1096051+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_46550-T1 ID=ATCC64974_46550-T1|Name=ATCC64974_46550-T1|organism=Aspergillus niger N402|type=mRNA|length=934bp|location=Sequence derived from alignment at OGUI01000007.1:1095118..1096051+ (Aspergillus niger N402)
ATGGTAAGCCCTCATGATCAACTCAGCCCCCGAACAAATCACCCTTTTAA
ATCAAGCGACCGCGCCCTCGAATTTTGTCCAACTCGTCACCCAAATTTCC
TCCTCGCCTCTCCCTTCGCCTTCAACCACACCTAAACCTTAAGCTCAACC
AAAAAATCCCTACTAACAAAATGACCAGGCGCGTAACAGCGAAAAAGCCC
AATCGATGCTCTTCCGTTTCCGGGCCCAACAAGCCGCGGATCTCGGAATC
ATCGACATTGGGCGCACGCGCCGCCCGAAAGCCATCACCACCGTTGACTC
GATCCCGATGTGCGAGAAATGGCGCGGCCAAGTGCTGAAGGAAATCTCAC
GCAAGGTGTCTCGGATTCAGGAGCTCAGTCTAAGCGATTACCAGATCCGG
GATCTGAACGATGAGATCAACAAGCTTATGAAGGAGAAGTGGACGTGGGA
GATGCAGATTCGGAACCTGGGCGGGCCCAACTACATGCGAGGCTCAGGCC
GAGTGTTTGATGATGATGGGAGGGAGATACCGGGCGGTGGGAAGGGGTAT
CGGTATTTTGGACGAGCGAGGGAGTTACCGGGTGTGAAGGAGATGTTTGA
AGCGGCGGCGAGACGGGGGAGGAGGCCGGCTGAGGAGGAGGATGAAGAAG
GTGGGAAGGGGAGAGGAGGCGAGATTGCGACGAAGAAGGTCGATGCTAAT
TACTTTGGGTATGGATTGGATGAGGAGGATGGGGTGCTTTTGGCGTATGA
GAAGCAGAAAGAGAAGGAGGCTGTTGAGAGATTGCGCAGGAAGGATGAGG
ATGTGGAAGATGGGTGGGAGCCGTTGCCTGGTGATGCTGGGGATGGCGTC
GAGTGGAGGTTGCCTACACTTGACGAGGTCCAGGAGGAGTTGGTTGATCG
ACGGAGGAGGAGGTTGTTGGACAAGATTTCATGA back to topCoding sequence (CDS) from alignment at OGUI01000007.1:1095118..1096051+ >ATCC64974_46550-T1 ID=ATCC64974_46550-T1|Name=ATCC64974_46550-T1|organism=Aspergillus niger N402|type=CDS|length=1518bp|location=Sequence derived from alignment at OGUI01000007.1:1095118..1096051+ (Aspergillus niger N402)
ATGGCGCGTAACAGCGAAAAAGCCCAATCGATGCTCTTCCGTTTCCGGGC
CCAACAAGCCGCGGATCTCGGAATCATCGACATTGGGCGCACGCGCCGCC
CGAAAGCCATCACCACCGTTGACTCGATCCCGATGTGCGAGAAATGGCGC
GGCCAAGTGCTGAAGGAAATCTCACGCAAGGTGTCTCGGATTCAGGAGCT
CAGTCTAAGCGATTACCAGATCCGGGATCTGAACGATGAGATCAACAAGC
TTATGAAGGAGAAGTGGACGTGGGAGATGCAGATTCGGAACCTGGGCGGG
CCCAACTACATGCGAGGCTCAGGCCGAGTGTTTGATGATGATGGGAGGGA
GATACCGGGCGGTGGGAAGGGGTATCGGTATTTTGGACGAGCGAGGGAGT
TACCGGGTGTGAAGGAGATGTTTGAAGCGGCGGCGAGACGGGGGAGGAGG
CCGGCTGAGGAGGAGGATGAAGAAGGTGGGAAGGGGAGAGGAGGCGAGAT
TGCGACGAAGAAGGTCGATGCTAATTACTTTGGGTATGGATTGGATGAGG
AGGATGGGGTGCTTTTGGCGTATGAGAAGCAGAAAGAGAAGGAGGCTGTT
GAGAGATTGCGCAGGAAGGATGAGGATGTGGAAGATGGGTGGGAGCCGTT
GCCTGGTGATGCTGGGGATGGCGTCGAGTGGAGGTTGCCTACACTTGACG
AGGTCCAGGAGGAGTTGGTTGATCGACGGAGGAGGAGGTTGTTGGACAAG
ATTTCATGAATGGCGCGTAACAGCGAAAAAGCCCAATCGATGCTCTTCCG
TTTCCGGGCCCAACAAGCCGCGGATCTCGGAATCATCGACATTGGGCGCA
CGCGCCGCCCGAAAGCCATCACCACCGTTGACTCGATCCCGATGTGCGAG
AAATGGCGCGGCCAAGTGCTGAAGGAAATCTCACGCAAGGTGTCTCGGAT
TCAGGAGCTCAGTCTAAGCGATTACCAGATCCGGGATCTGAACGATGAGA
TCAACAAGCTTATGAAGGAGAAGTGGACGTGGGAGATGCAGATTCGGAAC
CTGGGCGGGCCCAACTACATGCGAGGCTCAGGCCGAGTGTTTGATGATGA
TGGGAGGGAGATACCGGGCGGTGGGAAGGGGTATCGGTATTTTGGACGAG
CGAGGGAGTTACCGGGTGTGAAGGAGATGTTTGAAGCGGCGGCGAGACGG
GGGAGGAGGCCGGCTGAGGAGGAGGATGAAGAAGGTGGGAAGGGGAGAGG
AGGCGAGATTGCGACGAAGAAGGTCGATGCTAATTACTTTGGGTATGGAT
TGGATGAGGAGGATGGGGTGCTTTTGGCGTATGAGAAGCAGAAAGAGAAG
GAGGCTGTTGAGAGATTGCGCAGGAAGGATGAGGATGTGGAAGATGGGTG
GGAGCCGTTGCCTGGTGATGCTGGGGATGGCGTCGAGTGGAGGTTGCCTA
CACTTGACGAGGTCCAGGAGGAGTTGGTTGATCGACGGAGGAGGAGGTTG
TTGGACAAGATTTCATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000350 | generation of catalytic spliceosome for second transesterification step |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_46550-T1 | ATCC64974_46550-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264IOS |
| DBxref | InterPro:IPR037200 |
| DBxref | InterPro:IPR029012 |
| DBxref | InterPro:IPR009360 |
| DBxref | PFAM:PF06246 |
| Product | NineTeen Complex (NTC) component |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000007.1 | supercontig | OGUI01000007.1:1095118..1096051 + |
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