You are here

Home

ATCC64974_46590-T1, ATCC64974_46590-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_46590-T1
Unique NameATCC64974_46590-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:1103967..1105298+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_46590-T1 ID=ATCC64974_46590-T1|Name=ATCC64974_46590-T1|organism=Aspergillus niger N402|type=mRNA|length=1332bp|location=Sequence derived from alignment at OGUI01000007.1:1103967..1105298+ (Aspergillus niger N402)
ATGGCACATGCCCGTAGAGCTAAGCGAGCTCGACTATCAACAAGAGACTC
TAATGTGCAAGCCACTCAGTCTCAAGTAGCATCGCAGACGACACGGAATA
GTGCCAATCAGTTTTACGATCCGGATCAAGACCACCGAGAAAGGCGACAA
GTTCGTAAGGGCCTGAGAGATTTGACGCGGGACCTCAACGGTAAGGCCGA
CTCGAGCTCTTCAACTTGCCGCCGAGTCTGACATAATTTATGGTAGACTC
TAGAAATGAATATCTACAGTCCGGAAATCAGGGCCTGCGTGACACCATCA
AGAAAGCGAACGAGATCTTTGAGAATGTCAAGCAGACTTCTGACGCAACC
ATCGATTCACGGTTGCTTGTTCAAGCGGCAGATCTCTCATACAAAAAGAC
GGCACAGTTGGTGCTGGGAGACGCCAGTGCAGGAATAGATGTGGACGAGT
TTGTCTCGAAGTGTATCTCTTTTATGCGCCGGGCACCTGCGGATTCCCAA
GATTCGATGCCTTCCAGCACCCAACGGCGGCGGACGGGTATCGGAAGGAC
TCAAATGGACCCCAACGACAGCGACGAGGACCAAGGGGATGCGATGAACT
GGGACTGGCTCGGACGCGCTGCTTGTTTCTGTAGTAATGCCCGACCATCA
GTTCCTGGCTTCCTACTGGGACCGCTTTCGGTACAGAAGCGCGTCCGACA
GCAACCTGTACGAAGAGCCCGTGAACGAATTGACCCAGCACGGGCCGTTG
CACCGCAAGAGCTGCAGGAAAAGGACCTGGACAGGCAAGAAACATCGAAT
TTGACTACTATGTGTGCCAGCATCAATCGGCTTTTGGCAAGAACCCAAAA
CAACGGACAGGACGTGGTAGAGGCAGAATTGTCGCAGTTATCCGAGGAGC
CCGACGAAGATACGGTGCAAGAGGTGATGGCGAGGAACAATGTAGCCGAT
GATGGAGGTGTTCCTCTGTTCCAGTTCTGCATCAACCCAAATTCTTTCGG
ACAAAGTGTAGAGAATCTATTCTACGTTAGCTTTTTGGTCCGGGATGGCT
TGGTTGGAATCGCAGTGGATAGCCGGGGCCTGCCCACTTTGCGTAAGTCC
TATTCAGTACCCTCGATGATGTGGGCATCTAATTGACCATCCTCAACCAG
ATTCTGCAAAGCCTCATGCGCCTAGTGAAGCCCAGAGATTGGGCATCAAG
AAGCGTCAGGCCATTTTCACACTCGACTTTGAGACTTGGCAAGAATTGGT
CCAAGTCTATGACATCAAGGACCCCATCATTCCTCATCGGGAGGAAGAGA
CGCAAAATACAGCACAATCCTGGCAAGGATAA
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:1103967..1105298+

>ATCC64974_46590-T1 ID=ATCC64974_46590-T1|Name=ATCC64974_46590-T1|organism=Aspergillus niger N402|type=CDS|length=3654bp|location=Sequence derived from alignment at OGUI01000007.1:1103967..1105298+ (Aspergillus niger N402)
ATGGCACATGCCCGTAGAGCTAAGCGAGCTCGACTATCAACAAGAGACTC
TAATGTGCAAGCCACTCAGTCTCAAGTAGCATCGCAGACGACACGGAATA
GTGCCAATCAGTTTTACGATCCGGATCAAGACCACCGAGAAAGGCGACAA
GTTCGTAAGGGCCTGAGAGATTTGACGCGGGACCTCAACGACTCTAGAAA
TGAATATCTACAGTCCGGAAATCAGGGCCTGCGTGACACCATCAAGAAAG
CGAACGAGATCTTTGAGAATGTCAAGCAGACTTCTGACGCAACCATCGAT
TCACGGTTGCTTGTTCAAGCGGCAGATCTCTCATACAAAAAGACGGCACA
GTTGGTGCTGGGAGACGCCAGTGCAGGAATAGATGTGGACGAGTTTGTCT
CGAAGTGTATCTCTTTTATGCGCCGGGCACCTGCGGATTCCCAAGATTCG
ATGCCTTCCAGCACCCAACGGCGGCGGACGGGTATCGGAAGGACTCAAAT
GGACCCCAACGACAGCGACGAGGACCAAGGGGATGCGATGAACTGGGACT
GGCTCGGACGCGCTGCTTGTTTCTGTAGTAATGCCCGACCATCAGTTCCT
GGCTTCCTACTGGGACCGCTTTCGGTACAGAAGCGCGTCCGACAGCAACC
TGTACGAAGAGCCCGTGAACGAATTGACCCAGCACGGGCCGTTGCACCGC
AAGAGCTGCAGGAAAAGGACCTGGACAGGCAAGAAACATCGAATTTGACT
ACTATGTGTGCCAGCATCAATCGGCTTTTGGCAAGAACCCAAAACAACGG
ACAGGACGTGGTAGAGGCAGAATTGTCGCAGTTATCCGAGGAGCCCGACG
AAGATACGGTGCAAGAGGTGATGGCGAGGAACAATGTAGCCGATGATGGA
GGTGTTCCTCTGTTCCAGTTCTGCATCAACCCAAATTCTTTCGGACAAAG
TGTAGAGAATCTATTCTACGTTAGCTTTTTGGTCCGGGATGGCTTGGTTG
GAATCGCAGTGGATAGCCGGGGCCTGCCCACTTTGCATTCTGCAAAGCCT
CATGCGCCTAGTGAAGCCCAGAGATTGGGCATCAAGAAGCGTCAGGCCAT
TTTCACACTCGACTTTGAGACTTGGCAAGAATTGGTCCAAGTCTATGACA
TCAAGGACCCCATCATTCCTCATCGGGAGGAAGAGACGCAAAATACAGCA
CAATCCTGGCAAGGATAAATGGCACATGCCCGTAGAGCTAAGCGAGCTCG
ACTATCAACAAGAGACTCTAATGTGCAAGCCACTCAGTCTCAAGTAGCAT
CGCAGACGACACGGAATAGTGCCAATCAGTTTTACGATCCGGATCAAGAC
CACCGAGAAAGGCGACAAGTTCGTAAGGGCCTGAGAGATTTGACGCGGGA
CCTCAACGACTCTAGAAATGAATATCTACAGTCCGGAAATCAGGGCCTGC
GTGACACCATCAAGAAAGCGAACGAGATCTTTGAGAATGTCAAGCAGACT
TCTGACGCAACCATCGATTCACGGTTGCTTGTTCAAGCGGCAGATCTCTC
ATACAAAAAGACGGCACAGTTGGTGCTGGGAGACGCCAGTGCAGGAATAG
ATGTGGACGAGTTTGTCTCGAAGTGTATCTCTTTTATGCGCCGGGCACCT
GCGGATTCCCAAGATTCGATGCCTTCCAGCACCCAACGGCGGCGGACGGG
TATCGGAAGGACTCAAATGGACCCCAACGACAGCGACGAGGACCAAGGGG
ATGCGATGAACTGGGACTGGCTCGGACGCGCTGCTTGTTTCTGTAGTAAT
GCCCGACCATCAGTTCCTGGCTTCCTACTGGGACCGCTTTCGGTACAGAA
GCGCGTCCGACAGCAACCTGTACGAAGAGCCCGTGAACGAATTGACCCAG
CACGGGCCGTTGCACCGCAAGAGCTGCAGGAAAAGGACCTGGACAGGCAA
GAAACATCGAATTTGACTACTATGTGTGCCAGCATCAATCGGCTTTTGGC
AAGAACCCAAAACAACGGACAGGACGTGGTAGAGGCAGAATTGTCGCAGT
TATCCGAGGAGCCCGACGAAGATACGGTGCAAGAGGTGATGGCGAGGAAC
AATGTAGCCGATGATGGAGGTGTTCCTCTGTTCCAGTTCTGCATCAACCC
AAATTCTTTCGGACAAAGTGTAGAGAATCTATTCTACGTTAGCTTTTTGG
TCCGGGATGGCTTGGTTGGAATCGCAGTGGATAGCCGGGGCCTGCCCACT
TTGCATTCTGCAAAGCCTCATGCGCCTAGTGAAGCCCAGAGATTGGGCAT
CAAGAAGCGTCAGGCCATTTTCACACTCGACTTTGAGACTTGGCAAGAAT
TGGTCCAAGTCTATGACATCAAGGACCCCATCATTCCTCATCGGGAGGAA
GAGACGCAAAATACAGCACAATCCTGGCAAGGATAAATGGCACATGCCCG
TAGAGCTAAGCGAGCTCGACTATCAACAAGAGACTCTAATGTGCAAGCCA
CTCAGTCTCAAGTAGCATCGCAGACGACACGGAATAGTGCCAATCAGTTT
TACGATCCGGATCAAGACCACCGAGAAAGGCGACAAGTTCGTAAGGGCCT
GAGAGATTTGACGCGGGACCTCAACGACTCTAGAAATGAATATCTACAGT
CCGGAAATCAGGGCCTGCGTGACACCATCAAGAAAGCGAACGAGATCTTT
GAGAATGTCAAGCAGACTTCTGACGCAACCATCGATTCACGGTTGCTTGT
TCAAGCGGCAGATCTCTCATACAAAAAGACGGCACAGTTGGTGCTGGGAG
ACGCCAGTGCAGGAATAGATGTGGACGAGTTTGTCTCGAAGTGTATCTCT
TTTATGCGCCGGGCACCTGCGGATTCCCAAGATTCGATGCCTTCCAGCAC
CCAACGGCGGCGGACGGGTATCGGAAGGACTCAAATGGACCCCAACGACA
GCGACGAGGACCAAGGGGATGCGATGAACTGGGACTGGCTCGGACGCGCT
GCTTGTTTCTGTAGTAATGCCCGACCATCAGTTCCTGGCTTCCTACTGGG
ACCGCTTTCGGTACAGAAGCGCGTCCGACAGCAACCTGTACGAAGAGCCC
GTGAACGAATTGACCCAGCACGGGCCGTTGCACCGCAAGAGCTGCAGGAA
AAGGACCTGGACAGGCAAGAAACATCGAATTTGACTACTATGTGTGCCAG
CATCAATCGGCTTTTGGCAAGAACCCAAAACAACGGACAGGACGTGGTAG
AGGCAGAATTGTCGCAGTTATCCGAGGAGCCCGACGAAGATACGGTGCAA
GAGGTGATGGCGAGGAACAATGTAGCCGATGATGGAGGTGTTCCTCTGTT
CCAGTTCTGCATCAACCCAAATTCTTTCGGACAAAGTGTAGAGAATCTAT
TCTACGTTAGCTTTTTGGTCCGGGATGGCTTGGTTGGAATCGCAGTGGAT
AGCCGGGGCCTGCCCACTTTGCATTCTGCAAAGCCTCATGCGCCTAGTGA
AGCCCAGAGATTGGGCATCAAGAAGCGTCAGGCCATTTTCACACTCGACT
TTGAGACTTGGCAAGAATTGGTCCAAGTCTATGACATCAAGGACCCCATC
ATTCCTCATCGGGAGGAAGAGACGCAAAATACAGCACAATCCTGGCAAGG
ATAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_46590ATCC64974_46590Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_46590-T1.exon1ATCC64974_46590-T1.exon1Aspergillus niger N402exon
ATCC64974_46590-T1.exon2ATCC64974_46590-T1.exon2Aspergillus niger N402exon
ATCC64974_46590-T1.exon3ATCC64974_46590-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_46590-T1.cdsATCC64974_46590-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_46590-T1ATCC64974_46590-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG092634ZL
DBxrefInterPro:IPR014854
DBxrefInterPro:IPR029225
DBxrefPFAM:PF08743
DBxrefPFAM:PF15412
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:1103967..1105298 +
Powered by Drupal