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ATCC64974_46860-T1, ATCC64974_46860-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_46860-T1
Unique NameATCC64974_46860-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:1185031..1185964-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_46860-T1 ID=ATCC64974_46860-T1|Name=ATCC64974_46860-T1|organism=Aspergillus niger N402|type=mRNA|length=934bp|location=Sequence derived from alignment at OGUI01000007.1:1185031..1185964- (Aspergillus niger N402)
ATGAATAATATTCGCCAGATCCAAGCGCTCAATAAACGCGAGCTCGAAAA
TGCCATGTATGTCATGCTTATCTTCAACCCGGCTTATTGGTTTCTCTGCT
AATCTTTGTGGACATCTCAGACCCCCGGAAGCTTCCTGGCACGCAGACTA
CAGAGATACCGCATACATCTACATCGGTGGACTACCATACGACTTGTCCG
AGGGTGATATTGTAACCATCTTTTCGCAGTACGGCGAGCCCGTGCACATC
AATCTCGTGCGCGATAAAGAGACTGGAAAGAGTCGGGGTTTCGCCTTTCT
GAAGTACGAAGATCAGCGCAGTACAGATCTCGCAGTCGACAATCTTGGTG
GGGCAACAGTTCTAGGGAGAGTGCTGCGTGTGGACCACGTGAGGTACAAG
CGGCGCGATGACGAGGAGGAAACAGACAATGTCGCAAAGCTCATGGGCGA
TACGACTAGCAAGGATCATGATGACAGAGATACAGATGACGAACGGAGAA
GACGGAGGAAGAGAAGGGGAAGTGAATCAAGGGAAGAGGAGCCCGCCAGA
CGGCCTCTGCTCAAGGAGGAGATCGAGCTACAGGAGCTGATCAAGAATCA
TGACGAGGAAGATCCGATGAAGGAATTCCTTATTGAAGAGAAGAAAGAGG
AGGTCGCACTCGCCTTGGAGAAAATGCGCAGCAGCGAGAAGTCATCTCGG
AGACGTGACAGCCGTGAGAGATCAAGCCGCCATCACCGTTCTCACCGTCG
GAGACACGACGACGATCGAGACTCAGAGAGAAGACGCAGAGATCGGTCGC
CCAGAAGGGAAGAGCGATCTCATAGAGCTAGATCTCCATCTAGAAGGGAG
AGATCCGACAGAGAGAGGACGCCGGTCGCGTCGCGATCGCCCGACTCCCG
ACGCTACAGAGATAGACATGATCGACACCGTTAA
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Coding sequence (CDS) from alignment at OGUI01000007.1:1185031..1185964-

>ATCC64974_46860-T1 ID=ATCC64974_46860-T1|Name=ATCC64974_46860-T1|organism=Aspergillus niger N402|type=CDS|length=1740bp|location=Sequence derived from alignment at OGUI01000007.1:1185031..1185964- (Aspergillus niger N402)
ACCCCCGGAAGCTTCCTGGCACGCAGACTACAGAGATACCGCATACATCT
ACATCGGTGGACTACCATACGACTTGTCCGAGGGTGATATTGTAACCATC
TTTTCGCAGTACGGCGAGCCCGTGCACATCAATCTCGTGCGCGATAAAGA
GACTGGAAAGAGTCGGGGTTTCGCCTTTCTGAAGTACGAAGATCAGCGCA
GTACAGATCTCGCAGTCGACAATCTTGGTGGGGCAACAGTTCTAGGGAGA
GTGCTGCGTGTGGACCACGTGAGGTACAAGCGGCGCGATGACGAGGAGGA
AACAGACAATGTCGCAAAGCTCATGGGCGATACGACTAGCAAGGATCATG
ATGACAGAGATACAGATGACGAACGGAGAAGACGGAGGAAGAGAAGGGGA
AGTGAATCAAGGGAAGAGGAGCCCGCCAGACGGCCTCTGCTCAAGGAGGA
GATCGAGCTACAGGAGCTGATCAAGAATCATGACGAGGAAGATCCGATGA
AGGAATTCCTTATTGAAGAGAAGAAAGAGGAGGTCGCACTCGCCTTGGAG
AAAATGCGCAGCAGCGAGAAGTCATCTCGGAGACGTGACAGCCGTGAGAG
ATCAAGCCGCCATCACCGTTCTCACCGTCGGAGACACGACGACGATCGAG
ACTCAGAGAGAAGACGCAGAGATCGGTCGCCCAGAAGGGAAGAGCGATCT
CATAGAGCTAGATCTCCATCTAGAAGGGAGAGATCCGACAGAGAGAGGAC
GCCGGTCGCGTCGCGATCGCCCGACTCCCGACGCTACAGAGATAGACATG
ATCGACACCGTTAAATGAATAATATTCGCCAGATCCAAGCGCTCAATAAA
CGCGAGCTCGAAAATGCCATACCCCCGGAAGCTTCCTGGCACGCAGACTA
CAGAGATACCGCATACATCTACATCGGTGGACTACCATACGACTTGTCCG
AGGGTGATATTGTAACCATCTTTTCGCAGTACGGCGAGCCCGTGCACATC
AATCTCGTGCGCGATAAAGAGACTGGAAAGAGTCGGGGTTTCGCCTTTCT
GAAGTACGAAGATCAGCGCAGTACAGATCTCGCAGTCGACAATCTTGGTG
GGGCAACAGTTCTAGGGAGAGTGCTGCGTGTGGACCACGTGAGGTACAAG
CGGCGCGATGACGAGGAGGAAACAGACAATGTCGCAAAGCTCATGGGCGA
TACGACTAGCAAGGATCATGATGACAGAGATACAGATGACGAACGGAGAA
GACGGAGGAAGAGAAGGGGAAGTGAATCAAGGGAAGAGGAGCCCGCCAGA
CGGCCTCTGCTCAAGGAGGAGATCGAGCTACAGGAGCTGATCAAGAATCA
TGACGAGGAAGATCCGATGAAGGAATTCCTTATTGAAGAGAAGAAAGAGG
AGGTCGCACTCGCCTTGGAGAAAATGCGCAGCAGCGAGAAGTCATCTCGG
AGACGTGACAGCCGTGAGAGATCAAGCCGCCATCACCGTTCTCACCGTCG
GAGACACGACGACGATCGAGACTCAGAGAGAAGACGCAGAGATCGGTCGC
CCAGAAGGGAAGAGCGATCTCATAGAGCTAGATCTCCATCTAGAAGGGAG
AGATCCGACAGAGAGAGGACGCCGGTCGCGTCGCGATCGCCCGACTCCCG
ACGCTACAGAGATAGACATGATCGACACCGTTAAATGAATAATATTCGCC
AGATCCAAGCGCTCAATAAACGCGAGCTCGAAAATGCCAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_46860ATCC64974_46860Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_46860-T1ATCC64974_46860-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_46860-T1.cdsATCC64974_46860-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_46860-T1.exon2ATCC64974_46860-T1.exon2Aspergillus niger N402exon
ATCC64974_46860-T1.exon1ATCC64974_46860-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:1185031..1185964 -
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