You are here

Home

ATCC64974_46950-T1, ATCC64974_46950-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_46950-T1
Unique NameATCC64974_46950-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:1207941..1209123+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_46950-T1 ID=ATCC64974_46950-T1|Name=ATCC64974_46950-T1|organism=Aspergillus niger N402|type=mRNA|length=1183bp|location=Sequence derived from alignment at OGUI01000007.1:1207941..1209123+ (Aspergillus niger N402)
ATGACCCCCTCCACCCCCACCGAATCGCACTGGCGATTCTCCACGGTAAC
AGGCTACTTCTACCAAAGCGAGCCCTCCACCGACCCCAACACCTTCAACT
ACGTACGTCCACTCCCAAATCCCCCTAAATTAACCCAAAAACTAATATCA
TACACCCAGGCATCCTCCGACTTCGGCCTCATCCCCCGCGCCTACCCCAC
AGACGCGGACCTAGGCCCTGACCCAAAAACCACCTGGGAGCGCTTCGCCC
ACCACGTCCGCACCCTGAACGCCCAATCTGCGGACCCTAATGTCCGCTAT
AAGGTGCTCTTCCTCGGCCGCCATGGAGAGGGGTACCATAATGTAGCGGA
GCGGGAGTACGGCACCGAAGAGTGGGATGTAAGCTGACCCCTCTCTCTCC
TGTTACCATTTTTGCAACCCAGACCCCTTTTTCCAAAAGTAAAATTCCAT
GAATGATTGACATTGAAATCGAAAGAAACATTACTCCCTCCTCCCCGGCA
ATGCAACAAGCAACTGGGTTGACGCCCGTCTCACAGACGTAGGCAAATCA
CAAGCCCAAACCGCGCACAATACCTGGAAACAGCAACTCAAGGAACATAT
CCCCACTCCGGAGAAATTCTACGTCAGTCCGTTGAATAGGTGTCTTCAGA
CGGCGTGGATTACTTTCGTTGGAACGGGGATTGAGGGGACGGAGCCGTTT
AGGCCGGTTGTTAAGGAGGTATATCTATCTAACCATCCATCCCCTATCTA
TACCTTCCTTCTTGTCATGACGGACTAATTAATAACTGGGTGCCAGCTCC
TCCGCGAAACCATCGGCCAACACACTTGCGACAGCCGGTCCAGCAAGACA
GCCATCATGACCGAATACCCAACGTACATCATCGAAGAAGGGTTCGCCGA
GAACGACGAGATGTATGATGCCGAGCTCCGGGAATCTGATTCGGCGCGGG
ACAAGCGCTTCCGCGATCTGATGCAGGATATCTTTTCCACGGATGAGGAT
AAGATCTTCTTGTCGTTGACGGCGCATTCGGGCGCCATTACGAGTCTTTT
GAATGTCTTTGGACATCGGAGGTTTTCGCCTCTTGAGACCGGGGGCGTGA
TCCCGGTTTTTGTACGTGGGGAGAGGGTGATGGGGCCGTTGCCGGTCATG
GAGGTGGAGCCGTGGTTTGGGGTTCCTAAGTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:1207941..1209123+

>ATCC64974_46950-T1 ID=ATCC64974_46950-T1|Name=ATCC64974_46950-T1|organism=Aspergillus niger N402|type=CDS|length=3804bp|location=Sequence derived from alignment at OGUI01000007.1:1207941..1209123+ (Aspergillus niger N402)
ATGACCCCCTCCACCCCCACCGAATCGCACTGGCGATTCTCCACGGTAAC
AGGCTACTTCTACCAAAGCGAGCCCTCCACCGACCCCAACACCTTCAACT
ACGCATCCTCCGACTTCGGCCTCATCCCCCGCGCCTACCCCACAGACGCG
GACCTAGGCCCTGACCCAAAAACCACCTGGGAGCGCTTCGCCCACCACGT
CCGCACCCTGAACGCCCAATCTGCGGACCCTAATGTCCGCTATAAGGTGC
TCTTCCTCGGCCGCCATGGAGAGGGGTACCATAATGTAGCGGAGCGGGAG
TACGGCACCGAAGAGTGGGATAAACATTACTCCCTCCTCCCCGGCAATGC
AACAAGCAACTGGGTTGACGCCCGTCTCACAGACGTAGGCAAATCACAAG
CCCAAACCGCGCACAATACCTGGAAACAGCAACTCAAGGAACATATCCCC
ACTCCGGAGAAATTCTACGTCAGTCCGTTGAATAGGTGTCTTCAGACGGC
GTGGATTACTTTCGTTGGAACGGGGATTGAGGGGACGGAGCCGTTTAGGC
CGGTTGTTAAGGAGCTCCTCCGCGAAACCATCGGCCAACACACTTGCGAC
AGCCGGTCCAGCAAGACAGCCATCATGACCGAATACCCAACGTACATCAT
CGAAGAAGGGTTCGCCGAGAACGACGAGATGTATGATGCCGAGCTCCGGG
AATCTGATTCGGCGCGGGACAAGCGCTTCCGCGATCTGATGCAGGATATC
TTTTCCACGGATGAGGATAAGATCTTCTTGTCGTTGACGGCGCATTCGGG
CGCCATTACGAGTCTTTTGAATGTCTTTGGACATCGGAGGTTTTCGCCTC
TTGAGACCGGGGGCGTGATCCCGGTTTTTGTACGTGGGGAGAGGGTGATG
GGGCCGTTGCCGGTCATGGAGGTGGAGCCGTGGTTTGGGGTTCCTAAGTA
AATGACCCCCTCCACCCCCACCGAATCGCACTGGCGATTCTCCACGGTAA
CAGGCTACTTCTACCAAAGCGAGCCCTCCACCGACCCCAACACCTTCAAC
TACGCATCCTCCGACTTCGGCCTCATCCCCCGCGCCTACCCCACAGACGC
GGACCTAGGCCCTGACCCAAAAACCACCTGGGAGCGCTTCGCCCACCACG
TCCGCACCCTGAACGCCCAATCTGCGGACCCTAATGTCCGCTATAAGGTG
CTCTTCCTCGGCCGCCATGGAGAGGGGTACCATAATGTAGCGGAGCGGGA
GTACGGCACCGAAGAGTGGGATAAACATTACTCCCTCCTCCCCGGCAATG
CAACAAGCAACTGGGTTGACGCCCGTCTCACAGACGTAGGCAAATCACAA
GCCCAAACCGCGCACAATACCTGGAAACAGCAACTCAAGGAACATATCCC
CACTCCGGAGAAATTCTACGTCAGTCCGTTGAATAGGTGTCTTCAGACGG
CGTGGATTACTTTCGTTGGAACGGGGATTGAGGGGACGGAGCCGTTTAGG
CCGGTTGTTAAGGAGCTCCTCCGCGAAACCATCGGCCAACACACTTGCGA
CAGCCGGTCCAGCAAGACAGCCATCATGACCGAATACCCAACGTACATCA
TCGAAGAAGGGTTCGCCGAGAACGACGAGATGTATGATGCCGAGCTCCGG
GAATCTGATTCGGCGCGGGACAAGCGCTTCCGCGATCTGATGCAGGATAT
CTTTTCCACGGATGAGGATAAGATCTTCTTGTCGTTGACGGCGCATTCGG
GCGCCATTACGAGTCTTTTGAATGTCTTTGGACATCGGAGGTTTTCGCCT
CTTGAGACCGGGGGCGTGATCCCGGTTTTTGTACGTGGGGAGAGGGTGAT
GGGGCCGTTGCCGGTCATGGAGGTGGAGCCGTGGTTTGGGGTTCCTAAGT
AAATGACCCCCTCCACCCCCACCGAATCGCACTGGCGATTCTCCACGGTA
ACAGGCTACTTCTACCAAAGCGAGCCCTCCACCGACCCCAACACCTTCAA
CTACGCATCCTCCGACTTCGGCCTCATCCCCCGCGCCTACCCCACAGACG
CGGACCTAGGCCCTGACCCAAAAACCACCTGGGAGCGCTTCGCCCACCAC
GTCCGCACCCTGAACGCCCAATCTGCGGACCCTAATGTCCGCTATAAGGT
GCTCTTCCTCGGCCGCCATGGAGAGGGGTACCATAATGTAGCGGAGCGGG
AGTACGGCACCGAAGAGTGGGATAAACATTACTCCCTCCTCCCCGGCAAT
GCAACAAGCAACTGGGTTGACGCCCGTCTCACAGACGTAGGCAAATCACA
AGCCCAAACCGCGCACAATACCTGGAAACAGCAACTCAAGGAACATATCC
CCACTCCGGAGAAATTCTACGTCAGTCCGTTGAATAGGTGTCTTCAGACG
GCGTGGATTACTTTCGTTGGAACGGGGATTGAGGGGACGGAGCCGTTTAG
GCCGGTTGTTAAGGAGCTCCTCCGCGAAACCATCGGCCAACACACTTGCG
ACAGCCGGTCCAGCAAGACAGCCATCATGACCGAATACCCAACGTACATC
ATCGAAGAAGGGTTCGCCGAGAACGACGAGATGTATGATGCCGAGCTCCG
GGAATCTGATTCGGCGCGGGACAAGCGCTTCCGCGATCTGATGCAGGATA
TCTTTTCCACGGATGAGGATAAGATCTTCTTGTCGTTGACGGCGCATTCG
GGCGCCATTACGAGTCTTTTGAATGTCTTTGGACATCGGAGGTTTTCGCC
TCTTGAGACCGGGGGCGTGATCCCGGTTTTTGTACGTGGGGAGAGGGTGA
TGGGGCCGTTGCCGGTCATGGAGGTGGAGCCGTGGTTTGGGGTTCCTAAG
TAAATGACCCCCTCCACCCCCACCGAATCGCACTGGCGATTCTCCACGGT
AACAGGCTACTTCTACCAAAGCGAGCCCTCCACCGACCCCAACACCTTCA
ACTACGCATCCTCCGACTTCGGCCTCATCCCCCGCGCCTACCCCACAGAC
GCGGACCTAGGCCCTGACCCAAAAACCACCTGGGAGCGCTTCGCCCACCA
CGTCCGCACCCTGAACGCCCAATCTGCGGACCCTAATGTCCGCTATAAGG
TGCTCTTCCTCGGCCGCCATGGAGAGGGGTACCATAATGTAGCGGAGCGG
GAGTACGGCACCGAAGAGTGGGATAAACATTACTCCCTCCTCCCCGGCAA
TGCAACAAGCAACTGGGTTGACGCCCGTCTCACAGACGTAGGCAAATCAC
AAGCCCAAACCGCGCACAATACCTGGAAACAGCAACTCAAGGAACATATC
CCCACTCCGGAGAAATTCTACGTCAGTCCGTTGAATAGGTGTCTTCAGAC
GGCGTGGATTACTTTCGTTGGAACGGGGATTGAGGGGACGGAGCCGTTTA
GGCCGGTTGTTAAGGAGCTCCTCCGCGAAACCATCGGCCAACACACTTGC
GACAGCCGGTCCAGCAAGACAGCCATCATGACCGAATACCCAACGTACAT
CATCGAAGAAGGGTTCGCCGAGAACGACGAGATGTATGATGCCGAGCTCC
GGGAATCTGATTCGGCGCGGGACAAGCGCTTCCGCGATCTGATGCAGGAT
ATCTTTTCCACGGATGAGGATAAGATCTTCTTGTCGTTGACGGCGCATTC
GGGCGCCATTACGAGTCTTTTGAATGTCTTTGGACATCGGAGGTTTTCGC
CTCTTGAGACCGGGGGCGTGATCCCGGTTTTTGTACGTGGGGAGAGGGTG
ATGGGGCCGTTGCCGGTCATGGAGGTGGAGCCGTGGTTTGGGGTTCCTAA
GTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_46950ATCC64974_46950Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_46950-T1.exon1ATCC64974_46950-T1.exon1Aspergillus niger N402exon
ATCC64974_46950-T1.exon2ATCC64974_46950-T1.exon2Aspergillus niger N402exon
ATCC64974_46950-T1.exon3ATCC64974_46950-T1.exon3Aspergillus niger N402exon
ATCC64974_46950-T1.exon4ATCC64974_46950-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_46950-T1.cdsATCC64974_46950-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_46950-T1ATCC64974_46950-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR029033
DBxrefInterPro:IPR013078
DBxrefPFAM:PF00300
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:1207941..1209123 +
Powered by Drupal