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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000007.1:1297049..1299719- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_47280-T1 ID=ATCC64974_47280-T1|Name=ATCC64974_47280-T1|organism=Aspergillus niger N402|type=mRNA|length=2671bp|location=Sequence derived from alignment at OGUI01000007.1:1297049..1299719- (Aspergillus niger N402) ATGCGACGTCCTAGACATAATACGACCTCCTTACCGAGGGACCTGCGCGC
CGAACTCGGGATTAGAGATACCTACGGCGAGAAGAAGAATAGGAACAACG
GACCGGCATCGCGGAAAGAACGCCGTCGGGAAGAACGCTCCGGGAAGAAG
CAGCCTCAGTTTCAGCGACAGCAGAGAGGACTGCCTCCGAAGAAGAGGGG
TCGGTATGATGATGACGAGGATGACGATGAGGATATGGGGGATTTTGACG
ATTTTGATTTAGATGAGGGTGATGATGATGAGGATGCGGGTGATGTTATG
GCGAAACTTGCTAAGGCGAAAGCGGCGAAGGGGAAGGGTGCTGCTCCTGC
TCCTGCTAAGGAGGAGAAGAAGCAGCCCAAGTCTATTCTGAAAAAGGCGA
AGGCTGTGGAGAGTTCTGAGGAGGAGGATGATGATATTGACCTTGATGAG
GATGAGGACAACAAAGTCACAATGCGACGCCCGATATCGAAGACAGTTCA
ATCGAAGCTCGAGGAGGACGATGCGGAAATCGCTGCGCTGGAGAAGAAGC
TCGGTCTGAAAAAGGGCAAGAAGCTCCCGAAGTCGTTCGAAGAGGATGGT
CTGGGTGATTTGCTGGGTGATTTGGATGAGGATTCTGCAGATGAGGGCCG
GAAGCGCAAGAGGGAAGCTGATGAGTGGCTACGGAGTAAGCGGAGAAAGG
CGCAGGGCCTGGAGGAGCCTGAGGAGGAGGATTCTGAGGAGGAAGATGAT
AGTGATATGGGAGATGGGCTTGAAGGCTTTGACGACGACGAGTCCATGGG
CGATTTCGATGAAGATGAAGAAGGTGATGAGGATGAGGATGAGGAAGAGG
AGCCGGCTCCTAAGAAGAAGGAAAACCCCTACGTCGCTCCAGTCAAAGAA
GCCGAAAGCCGTCCCCAGAAGTACATTCCTCCTTCGCTTCGCGCTGCTTC
CAATTCAGAAGATGAGTCTCTTGTTCGCCTGAGGAGACAGGCTCAGGGTC
ACTTGAACAAGCTGTCTGAAGCTAACATGGTCTCTATTCTCGCGGAGTTC
GAGAAGCTCTACCGGGATCATCCTCGTCAAAATGTCACTTCGACCTTGAT
CTCTCTGCTATTCGGATTGATCTGCGAGAGATCTGCTCTGTCGGATACTT
TCATCATTCTACATGCGGGTTTCATTGCTGCAGTGTATAAAATTGTGGGT
ACGGACTTTGGCGCGGAAATCGTGCAGAAGATCGTCGAGACCTTCGATGC
CCGCGGCGATGAACGGGGTAAGTTCGAAGGAAAGGAGACCATCAACCTGA
TCTCTCTTTTGTCTCAACTGTACAACTTCCACGTTATCGGAAGCACTCTT
GTCTTCGACTACATCCGGCTCTTCCTCGAAGAAATCACCGAGGAGAACAC
CGAACTGCTCCTCAAGATCATCCGAAGTACGTTATTCCCATCCCTTCCTT
CTTAAGCCCGTACTAACCACCCCAGACTCCGGACCCCAACTCCGACAAGA
TGATCCCTCCTCCCTCAAAGACATCGTCCTTCTCATCCAACCCGCCGTCG
CGAAAGCCGGCGAAGCCGCCCTCTCCGTCCGTACCAAGTTCATGATCGAC
ACCATCACCGACCTCAAGAACAACAAGCTGAAATCCAACGTGAACGCCAG
CATCAGCTCCGAACACATCACCAAGATGCGCAAGATTCTCGGCTCTCTCA
ACAACACACGAGTCATCCGGGCCTCCGAACCCATCAGCATCTCCCGCACC
GATATCCACAACTCCGAGAAGAAGGGCAAATGGTGGCTCGTCGGCGCCAG
CTGGCGCGAAGATCCCCTCGAGTCCGCCCGGAAGGAACTCAACGGCCTCC
CCACGAACAGCACCCACGCCGACGTCTCAGACAGCGACTCCGAGCCCGAC
CTCGTCAACATCGCCAAAGCGCACCGCATGAACACTGACGTCCGCCGCTC
CATCTTCGTCGCTATCATGTCCGCAACCGACTACCAGGACGCACACGTCC
GCCTCCTCAAACTCCGTCTCAAACGCGCCCAGGAATTCGAAATCCCCCGT
GTCCTCACCCACTGCGCCATGGAAGAAGAAGCCCACAACCCCTACTACAC
GCTCATCGCGAAGCGCCTCTGTGGCGAAATGGGCCGTCGCATCAAGGTAT
CCTTCATGTACACGCTATGGAACATCTTCAAACGCATGGGCGAGTCCGGC
GACATGGACGATAGCGATGACGACGACGCATTCGACGACGAAGACGATCA
AAACAAACTCGAGATGAAATCCGTCGTCAACCTAGCGAAGATGTACGGAT
CGCTTATCGCAGATGGGACGTTGAATCTGGGCGTGCTTAAGATCCTTAAC
TTCGCATATTTGCAGCCGAAGAGCAAGGCCTTTGTGGAGTTGCTCTTGAT
TAGTGTGATCCAGCAGTCGCAGAAGCAGAAGAAAAAGAAGAAGTCGAAGT
CGAAGGATGAGGATGAGCAGGATGAGAAGGCGCTTCTGGAGATCTTCCTG
CGCGCGAGAGAAACGCCCCAGATTGTCAAGGGCTTGATCTTCTTCTTGAG
GAAGGTGGTCGCGAAGACGGATATTGTGCCTTCTGGGAAGGAGTTGAAGG
TTGTTAAGTGGGGATGTAAGGTTGCGGTGGATGCGTTGAAGGTTGTGGTT
AAGGAAGGGGATGCTGAGTGA back to topCoding sequence (CDS) from alignment at OGUI01000007.1:1297049..1299719- >ATCC64974_47280-T1 ID=ATCC64974_47280-T1|Name=ATCC64974_47280-T1|organism=Aspergillus niger N402|type=CDS|length=5244bp|location=Sequence derived from alignment at OGUI01000007.1:1297049..1299719- (Aspergillus niger N402) ACTCCGGACCCCAACTCCGACAAGATGATCCCTCCTCCCTCAAAGACATC GTCCTTCTCATCCAACCCGCCGTCGCGAAAGCCGGCGAAGCCGCCCTCTC CGTCCGTACCAAGTTCATGATCGACACCATCACCGACCTCAAGAACAACA AGCTGAAATCCAACGTGAACGCCAGCATCAGCTCCGAACACATCACCAAG ATGCGCAAGATTCTCGGCTCTCTCAACAACACACGAGTCATCCGGGCCTC CGAACCCATCAGCATCTCCCGCACCGATATCCACAACTCCGAGAAGAAGG GCAAATGGTGGCTCGTCGGCGCCAGCTGGCGCGAAGATCCCCTCGAGTCC GCCCGGAAGGAACTCAACGGCCTCCCCACGAACAGCACCCACGCCGACGT CTCAGACAGCGACTCCGAGCCCGACCTCGTCAACATCGCCAAAGCGCACC GCATGAACACTGACGTCCGCCGCTCCATCTTCGTCGCTATCATGTCCGCA ACCGACTACCAGGACGCACACGTCCGCCTCCTCAAACTCCGTCTCAAACG CGCCCAGGAATTCGAAATCCCCCGTGTCCTCACCCACTGCGCCATGGAAG AAGAAGCCCACAACCCCTACTACACGCTCATCGCGAAGCGCCTCTGTGGC GAAATGGGCCGTCGCATCAAGGTATCCTTCATGTACACGCTATGGAACAT CTTCAAACGCATGGGCGAGTCCGGCGACATGGACGATAGCGATGACGACG ACGCATTCGACGACGAAGACGATCAAAACAAACTCGAGATGAAATCCGTC GTCAACCTAGCGAAGATGTACGGATCGCTTATCGCAGATGGGACGTTGAA TCTGGGCGTGCTTAAGATCCTTAACTTCGCATATTTGCAGCCGAAGAGCA AGGCCTTTGTGGAGTTGCTCTTGATTAGTGTGATCCAGCAGTCGCAGAAG CAGAAGAAAAAGAAGAAGTCGAAGTCGAAGGATGAGGATGAGCAGGATGA GAAGGCGCTTCTGGAGATCTTCCTGCGCGCGAGAGAAACGCCCCAGATTG TCAAGGGCTTGATCTTCTTCTTGAGGAAGGTGGTCGCGAAGACGGATATT GTGCCTTCTGGGAAGGAGTTGAAGGTTGTTAAGTGGGGATGTAAGGTTGC GGTGGATGCGTTGAAGGTTGTGGTTAAGGAAGGGGATGCTGAGTGAATGC GACGTCCTAGACATAATACGACCTCCTTACCGAGGGACCTGCGCGCCGAA CTCGGGATTAGAGATACCTACGGCGAGAAGAAGAATAGGAACAACGGACC GGCATCGCGGAAAGAACGCCGTCGGGAAGAACGCTCCGGGAAGAAGCAGC CTCAGTTTCAGCGACAGCAGAGAGGACTGCCTCCGAAGAAGAGGGGTCGG TATGATGATGACGAGGATGACGATGAGGATATGGGGGATTTTGACGATTT TGATTTAGATGAGGGTGATGATGATGAGGATGCGGGTGATGTTATGGCGA AACTTGCTAAGGCGAAAGCGGCGAAGGGGAAGGGTGCTGCTCCTGCTCCT GCTAAGGAGGAGAAGAAGCAGCCCAAGTCTATTCTGAAAAAGGCGAAGGC TGTGGAGAGTTCTGAGGAGGAGGATGATGATATTGACCTTGATGAGGATG AGGACAACAAAGTCACAATGCGACGCCCGATATCGAAGACAGTTCAATCG AAGCTCGAGGAGGACGATGCGGAAATCGCTGCGCTGGAGAAGAAGCTCGG TCTGAAAAAGGGCAAGAAGCTCCCGAAGTCGTTCGAAGAGGATGGTCTGG GTGATTTGCTGGGTGATTTGGATGAGGATTCTGCAGATGAGGGCCGGAAG CGCAAGAGGGAAGCTGATGAGTGGCTACGGAGTAAGCGGAGAAAGGCGCA GGGCCTGGAGGAGCCTGAGGAGGAGGATTCTGAGGAGGAAGATGATAGTG ATATGGGAGATGGGCTTGAAGGCTTTGACGACGACGAGTCCATGGGCGAT TTCGATGAAGATGAAGAAGGTGATGAGGATGAGGATGAGGAAGAGGAGCC GGCTCCTAAGAAGAAGGAAAACCCCTACGTCGCTCCAGTCAAAGAAGCCG AAAGCCGTCCCCAGAAGTACATTCCTCCTTCGCTTCGCGCTGCTTCCAAT TCAGAAGATGAGTCTCTTGTTCGCCTGAGGAGACAGGCTCAGGGTCACTT GAACAAGCTGTCTGAAGCTAACATGGTCTCTATTCTCGCGGAGTTCGAGA AGCTCTACCGGGATCATCCTCGTCAAAATGTCACTTCGACCTTGATCTCT CTGCTATTCGGATTGATCTGCGAGAGATCTGCTCTGTCGGATACTTTCAT CATTCTACATGCGGGTTTCATTGCTGCAGTGTATAAAATTGTGGGTACGG ACTTTGGCGCGGAAATCGTGCAGAAGATCGTCGAGACCTTCGATGCCCGC GGCGATGAACGGGGTAAGTTCGAAGGAAAGGAGACCATCAACCTGATCTC TCTTTTGTCTCAACTGTACAACTTCCACGTTATCGGAAGCACTCTTGTCT TCGACTACATCCGGCTCTTCCTCGAAGAAATCACCGAGGAGAACACCGAA CTGCTCCTCAAGATCATCCGAAACTCCGGACCCCAACTCCGACAAGATGA TCCCTCCTCCCTCAAAGACATCGTCCTTCTCATCCAACCCGCCGTCGCGA AAGCCGGCGAAGCCGCCCTCTCCGTCCGTACCAAGTTCATGATCGACACC ATCACCGACCTCAAGAACAACAAGCTGAAATCCAACGTGAACGCCAGCAT CAGCTCCGAACACATCACCAAGATGCGCAAGATTCTCGGCTCTCTCAACA ACACACGAGTCATCCGGGCCTCCGAACCCATCAGCATCTCCCGCACCGAT ATCCACAACTCCGAGAAGAAGGGCAAATGGTGGCTCGTCGGCGCCAGCTG GCGCGAAGATCCCCTCGAGTCCGCCCGGAAGGAACTCAACGGCCTCCCCA CGAACAGCACCCACGCCGACGTCTCAGACAGCGACTCCGAGCCCGACCTC GTCAACATCGCCAAAGCGCACCGCATGAACACTGACGTCCGCCGCTCCAT CTTCGTCGCTATCATGTCCGCAACCGACTACCAGGACGCACACGTCCGCC TCCTCAAACTCCGTCTCAAACGCGCCCAGGAATTCGAAATCCCCCGTGTC CTCACCCACTGCGCCATGGAAGAAGAAGCCCACAACCCCTACTACACGCT CATCGCGAAGCGCCTCTGTGGCGAAATGGGCCGTCGCATCAAGGTATCCT TCATGTACACGCTATGGAACATCTTCAAACGCATGGGCGAGTCCGGCGAC ATGGACGATAGCGATGACGACGACGCATTCGACGACGAAGACGATCAAAA CAAACTCGAGATGAAATCCGTCGTCAACCTAGCGAAGATGTACGGATCGC TTATCGCAGATGGGACGTTGAATCTGGGCGTGCTTAAGATCCTTAACTTC GCATATTTGCAGCCGAAGAGCAAGGCCTTTGTGGAGTTGCTCTTGATTAG TGTGATCCAGCAGTCGCAGAAGCAGAAGAAAAAGAAGAAGTCGAAGTCGA AGGATGAGGATGAGCAGGATGAGAAGGCGCTTCTGGAGATCTTCCTGCGC GCGAGAGAAACGCCCCAGATTGTCAAGGGCTTGATCTTCTTCTTGAGGAA GGTGGTCGCGAAGACGGATATTGTGCCTTCTGGGAAGGAGTTGAAGGTTG TTAAGTGGGGATGTAAGGTTGCGGTGGATGCGTTGAAGGTTGTGGTTAAG GAAGGGGATGCTGAGTGAATGCGACGTCCTAGACATAATACGACCTCCTT ACCGAGGGACCTGCGCGCCGAACTCGGGATTAGAGATACCTACGGCGAGA AGAAGAATAGGAACAACGGACCGGCATCGCGGAAAGAACGCCGTCGGGAA GAACGCTCCGGGAAGAAGCAGCCTCAGTTTCAGCGACAGCAGAGAGGACT GCCTCCGAAGAAGAGGGGTCGGTATGATGATGACGAGGATGACGATGAGG ATATGGGGGATTTTGACGATTTTGATTTAGATGAGGGTGATGATGATGAG GATGCGGGTGATGTTATGGCGAAACTTGCTAAGGCGAAAGCGGCGAAGGG GAAGGGTGCTGCTCCTGCTCCTGCTAAGGAGGAGAAGAAGCAGCCCAAGT CTATTCTGAAAAAGGCGAAGGCTGTGGAGAGTTCTGAGGAGGAGGATGAT GATATTGACCTTGATGAGGATGAGGACAACAAAGTCACAATGCGACGCCC GATATCGAAGACAGTTCAATCGAAGCTCGAGGAGGACGATGCGGAAATCG CTGCGCTGGAGAAGAAGCTCGGTCTGAAAAAGGGCAAGAAGCTCCCGAAG TCGTTCGAAGAGGATGGTCTGGGTGATTTGCTGGGTGATTTGGATGAGGA TTCTGCAGATGAGGGCCGGAAGCGCAAGAGGGAAGCTGATGAGTGGCTAC GGAGTAAGCGGAGAAAGGCGCAGGGCCTGGAGGAGCCTGAGGAGGAGGAT TCTGAGGAGGAAGATGATAGTGATATGGGAGATGGGCTTGAAGGCTTTGA CGACGACGAGTCCATGGGCGATTTCGATGAAGATGAAGAAGGTGATGAGG ATGAGGATGAGGAAGAGGAGCCGGCTCCTAAGAAGAAGGAAAACCCCTAC GTCGCTCCAGTCAAAGAAGCCGAAAGCCGTCCCCAGAAGTACATTCCTCC TTCGCTTCGCGCTGCTTCCAATTCAGAAGATGAGTCTCTTGTTCGCCTGA GGAGACAGGCTCAGGGTCACTTGAACAAGCTGTCTGAAGCTAACATGGTC TCTATTCTCGCGGAGTTCGAGAAGCTCTACCGGGATCATCCTCGTCAAAA TGTCACTTCGACCTTGATCTCTCTGCTATTCGGATTGATCTGCGAGAGAT CTGCTCTGTCGGATACTTTCATCATTCTACATGCGGGTTTCATTGCTGCA GTGTATAAAATTGTGGGTACGGACTTTGGCGCGGAAATCGTGCAGAAGAT CGTCGAGACCTTCGATGCCCGCGGCGATGAACGGGGTAAGTTCGAAGGAA AGGAGACCATCAACCTGATCTCTCTTTTGTCTCAACTGTACAACTTCCAC GTTATCGGAAGCACTCTTGTCTTCGACTACATCCGGCTCTTCCTCGAAGA AATCACCGAGGAGAACACCGAACTGCTCCTCAAGATCATCCGAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0003723 | RNA binding |
GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
ATCC64974_47280-T1 | ATCC64974_47280-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | BUSCO:EOG09261I1G |
DBxref | InterPro:IPR016024 |
DBxref | InterPro:IPR016021 |
DBxref | InterPro:IPR003890 |
DBxref | InterPro:IPR003891 |
DBxref | PFAM:PF02854 |
DBxref | PFAM:PF02847 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
OGUI01000007.1 | supercontig | OGUI01000007.1:1297049..1299719 - |
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