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ATCC64974_47290-T1, ATCC64974_47290-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_47290-T1
Unique NameATCC64974_47290-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:1300029..1300484+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_47290-T1 ID=ATCC64974_47290-T1|Name=ATCC64974_47290-T1|organism=Aspergillus niger N402|type=mRNA|length=456bp|location=Sequence derived from alignment at OGUI01000007.1:1300029..1300484+ (Aspergillus niger N402)
ATGCCCGCACACCTGGGCCACGAGGAGGTACTTCACCTCCACAACCACAA
CAACACCCCCAAAACCAATACTGACCAAACGAACTAGTTCTTCACCTCCC
TCACCACCCTCCTAAGCACCACATCCCAAAAAACCCGCGGATCCGTGTAC
CTCACCCAGAAGCCTCTCCTCGACTCTACCAACACCCAGTCCCAACCATC
CATTCTCATCCGCGCGACAGACGGCAACACCAACGCCCCGAACCCCAAGA
CGGCAGAGGCCAAGAAGAAGGTGTCGAAGGCGACAGCAGCATCGAAAGTG
AAGATCTCGACGGTCGTGAGCCCTGATGACCTGGAGGCGTTCTATGCGCG
GTATGCGGAGGTGTGTAAGGCTGGGATGACGGGGTTGAAGAAGAGGGATC
GGAAGAAGGGCAAGGCGAAGGGGAAGAAGGAGGGTGGGAAGGTTGTTAAG
GGGTGA
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Coding sequence (CDS) from alignment at OGUI01000007.1:1300029..1300484+

>ATCC64974_47290-T1 ID=ATCC64974_47290-T1|Name=ATCC64974_47290-T1|organism=Aspergillus niger N402|type=CDS|length=792bp|location=Sequence derived from alignment at OGUI01000007.1:1300029..1300484+ (Aspergillus niger N402)
ATGCCCGCACACCTGGGCCACGAGGAGTTCTTCACCTCCCTCACCACCCT
CCTAAGCACCACATCCCAAAAAACCCGCGGATCCGTGTACCTCACCCAGA
AGCCTCTCCTCGACTCTACCAACACCCAGTCCCAACCATCCATTCTCATC
CGCGCGACAGACGGCAACACCAACGCCCCGAACCCCAAGACGGCAGAGGC
CAAGAAGAAGGTGTCGAAGGCGACAGCAGCATCGAAAGTGAAGATCTCGA
CGGTCGTGAGCCCTGATGACCTGGAGGCGTTCTATGCGCGGTATGCGGAG
GTGTGTAAGGCTGGGATGACGGGGTTGAAGAAGAGGGATCGGAAGAAGGG
CAAGGCGAAGGGGAAGAAGGAGGGTGGGAAGGTTGTTAAGGGGTGAATGC
CCGCACACCTGGGCCACGAGGAGTTCTTCACCTCCCTCACCACCCTCCTA
AGCACCACATCCCAAAAAACCCGCGGATCCGTGTACCTCACCCAGAAGCC
TCTCCTCGACTCTACCAACACCCAGTCCCAACCATCCATTCTCATCCGCG
CGACAGACGGCAACACCAACGCCCCGAACCCCAAGACGGCAGAGGCCAAG
AAGAAGGTGTCGAAGGCGACAGCAGCATCGAAAGTGAAGATCTCGACGGT
CGTGAGCCCTGATGACCTGGAGGCGTTCTATGCGCGGTATGCGGAGGTGT
GTAAGGCTGGGATGACGGGGTTGAAGAAGAGGGATCGGAAGAAGGGCAAG
GCGAAGGGGAAGAAGGAGGGTGGGAAGGTTGTTAAGGGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005786signal recognition particle, endoplasmic reticulum targeting
GO:0048500signal recognition particle
Vocabulary: Biological Process
TermDefinition
GO:0006614SRP-dependent cotranslational protein targeting to membrane
Vocabulary: Molecular Function
TermDefinition
GO:0030942endoplasmic reticulum signal peptide binding
GO:00083127S RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_47290ATCC64974_47290Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_47290-T1.exon1ATCC64974_47290-T1.exon1Aspergillus niger N402exon
ATCC64974_47290-T1.exon2ATCC64974_47290-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_47290-T1.cdsATCC64974_47290-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_47290-T1ATCC64974_47290-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR003210
DBxrefInterPro:IPR009018
DBxrefPFAM:PF02290
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:1300029..1300484 +
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