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ATCC64974_47390-T1, ATCC64974_47390-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_47390-T1
Unique NameATCC64974_47390-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:1321310..1323302+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_47390-T1 ID=ATCC64974_47390-T1|Name=ATCC64974_47390-T1|organism=Aspergillus niger N402|type=mRNA|length=1993bp|location=Sequence derived from alignment at OGUI01000007.1:1321310..1323302+ (Aspergillus niger N402)
ATGACGTCCCGGAAGACGCAGCAGGAGATTGACAAGACCTTCAAGAAGGT
CGCTGAAGGCATTCAAACATTCGAGGGTATCTATGAGAAGATCCGGTCAA
CATCAAATATCACGCAACGGGATAAGCTCGAGGAGAACCTGAAACGGGAG
ATCAAGAAGTTACAACGATATCGTGACCAAATCAAGTCATGGGCATCAGG
AAACGAGGTCAAGGATAAGGGGCCGCTGCTAGAGCAGCGCAGGGCCATTG
AGACTGTGGGCTTATCCGATCCCTGTTGAAGCGCTTACTCAATGAGGGGC
TGCTGCTAACTTGTGTTGTCTGATAGTGCATGGAACAGTTCAAGGCAGTA
GAGAAGGAGATGAAGACAAAGGCATATTCGAAAGAAGGGTTGTCGGCTGC
ATCGAGATTAGATCCTAAAGAGAAGGAGAAGGTCGAGACTTGCGACTTCC
TATCGAATATGGTGGACGAGCTGCAACAGAAGATCGAGGCCTTCGAAGCG
GAAGAGGAAACGCTTCACATGCAAATGAAGAAAGGCAAGAAGGACGTGGC
CAAGACGAATCGCCTATCAGACCTTTCACGCTTAACAGAACGCCATAAGT
GGCATGTCAATAAGTTGGAACTGTTGCTACGGTCGCTGCAGAACGGCAAC
CTCGAAGTTGCTCAGGTGCTGGATATCAAGGAAAGCATTAAGTACTATGT
GGAGGATGGGCACAACATTGACTACTCTGGTGAGGATGAAACCTTGTACG
ACGACCTGAACCTGGACAACGAGGCAGAGGTGCAGTTCGGCATGACAGGG
GACAACGATAAAGTATCCTCGCAAGACACCCAGTCGATCCAAGACGAGGA
GCCGGAAATCAAGCCCAAGGTCAACAAGGGTGAGAGCGCAGGATTACGAA
GGCCATCTGCACAGATGAAGTCCCCTCTACCTGTGTTAGCAACACTTCAT
CCGTCGACCTCCACGACTGCCGCCTCAGGCATGAAACCCGCACCACCGCC
TACCCGCCTCCCCGGGGAAACACTCAAGTACGCGTCCGCTGCCGCTGCCG
CTGCTGCAAGTGACAAGAACGGGGTGGGCATTGCACCACTTCCGCCACCT
CCAGGCGCAAGCCCCGCTTTCCCGCACGCTGTGCCTGCAAACAAAGCTTC
AGCCACTGCCTCGCCGAGCGTTGCATCGGTACAACCTACTACATCCAAGG
CCGCGCCGGTCCTCACGATAGCGGCGGAGGACATCACCGGTGCACGATCA
AAAACACCTTCTGTCAGCCCCAACGTGGCTGCTGCGAGCACATCGTCACA
TACAATGGATAAAGTTGAGGCCCCAGCAGCTGCCAAGGAGCAACCTGCGA
CGAACGGTGAGGCGACGAGTAAGCAAGAGGAGCAGGAGCAGGAGCAGGAG
AGCGAGGAATCGATCTTCCACCTCCCTCCCGGCCTGCAGGATCTTATTCA
GTCGTTCGAGGTCACGAGGTCCCGGGCGTCAGCAAGCGCAGCCAACGCCT
CCCCGTCAGTGCAGCGCATGCTTGCAACATCCCTCGCGAACTGCCCGGAG
CCTGCCGATGCGGAGAAGCCTCGTCATTACAAGCCTCAAAACCCTTACAA
TACGCCTTTATACTATCCTCAGGAACCGCTCTCCATCTTCGATGATCCGC
GCTTGTACGAAACCGGGCGCATCGACACGGATACACTGTTCTACCTGTTC
TACTACCGACAAGGCAGTTACCAACAGTATCTCGCGGCCAAGGCGTTGAA
GAACCAGAGTTGGCGCTTCCACAAACAGTATCAAACCTGGTTCCAACGTC
ACGAGGAGCCGAAGACGATCACGGAGGAGTTTGAGCAGGGCACATATCGC
TTCTTCGATTATGAGAGTACATGGTAAGTAACCCACTCGGAAATCCCGAA
GACCCGCAGAACCCAGCTAACAAACCTTGCAGGATGAACCGTCGCAAGGC
TGACTTCAAGTTCGTCTACAAATACTTGGAAGATGACCTGTAA
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Coding sequence (CDS) from alignment at OGUI01000007.1:1321310..1323302+

>ATCC64974_47390-T1 ID=ATCC64974_47390-T1|Name=ATCC64974_47390-T1|organism=Aspergillus niger N402|type=CDS|length=5589bp|location=Sequence derived from alignment at OGUI01000007.1:1321310..1323302+ (Aspergillus niger N402)
ATGACGTCCCGGAAGACGCAGCAGGAGATTGACAAGACCTTCAAGAAGGT
CGCTGAAGGCATTCAAACATTCGAGGGTATCTATGAGAAGATCCGGTCAA
CATCAAATATCACGCAACGGGATAAGCTCGAGGAGAACCTGAAACGGGAG
ATCAAGAAGTTACAACGATATCGTGACCAAATCAAGTCATGGGCATCAGG
AAACGAGGTCAAGGATAAGGGGCCGCTGCTAGAGCAGCGCAGGGCCATTG
AGACTTGCATGGAACAGTTCAAGGCAGTAGAGAAGGAGATGAAGACAAAG
GCATATTCGAAAGAAGGGTTGTCGGCTGCATCGAGATTAGATCCTAAAGA
GAAGGAGAAGGTCGAGACTTGCGACTTCCTATCGAATATGGTGGACGAGC
TGCAACAGAAGATCGAGGCCTTCGAAGCGGAAGAGGAAACGCTTCACATG
CAAATGAAGAAAGGCAAGAAGGACGTGGCCAAGACGAATCGCCTATCAGA
CCTTTCACGCTTAACAGAACGCCATAAGTGGCATGTCAATAAGTTGGAAC
TGTTGCTACGGTCGCTGCAGAACGGCAACCTCGAAGTTGCTCAGGTGCTG
GATATCAAGGAAAGCATTAAGTACTATGTGGAGGATGGGCACAACATTGA
CTACTCTGGTGAGGATGAAACCTTGTACGACGACCTGAACCTGGACAACG
AGGCAGAGGTGCAGTTCGGCATGACAGGGGACAACGATAAAGTATCCTCG
CAAGACACCCAGTCGATCCAAGACGAGGAGCCGGAAATCAAGCCCAAGGT
CAACAAGGGTGAGAGCGCAGGATTACGAAGGCCATCTGCACAGATGAAGT
CCCCTCTACCTGTGTTAGCAACACTTCATCCGTCGACCTCCACGACTGCC
GCCTCAGGCATGAAACCCGCACCACCGCCTACCCGCCTCCCCGGGGAAAC
ACTCAAGTACGCGTCCGCTGCCGCTGCCGCTGCTGCAAGTGACAAGAACG
GGGTGGGCATTGCACCACTTCCGCCACCTCCAGGCGCAAGCCCCGCTTTC
CCGCACGCTGTGCCTGCAAACAAAGCTTCAGCCACTGCCTCGCCGAGCGT
TGCATCGGTACAACCTACTACATCCAAGGCCGCGCCGGTCCTCACGATAG
CGGCGGAGGACATCACCGGTGCACGATCAAAAACACCTTCTGTCAGCCCC
AACGTGGCTGCTGCGAGCACATCGTCACATACAATGGATAAAGTTGAGGC
CCCAGCAGCTGCCAAGGAGCAACCTGCGACGAACGGTGAGGCGACGAGTA
AGCAAGAGGAGCAGGAGCAGGAGCAGGAGAGCGAGGAATCGATCTTCCAC
CTCCCTCCCGGCCTGCAGGATCTTATTCAGTCGTTCGAGGTCACGAGGTC
CCGGGCGTCAGCAAGCGCAGCCAACGCCTCCCCGTCAGTGCAGCGCATGC
TTGCAACATCCCTCGCGAACTGCCCGGAGCCTGCCGATGCGGAGAAGCCT
CGTCATTACAAGCCTCAAAACCCTTACAATACGCCTTTATACTATCCTCA
GGAACCGCTCTCCATCTTCGATGATCCGCGCTTGTACGAAACCGGGCGCA
TCGACACGGATACACTGTTCTACCTGTTCTACTACCGACAAGGCAGTTAC
CAACAGTATCTCGCGGCCAAGGCGTTGAAGAACCAGAGTTGGCGCTTCCA
CAAACAGTATCAAACCTGGTTCCAACGTCACGAGGAGCCGAAGACGATCA
CGGAGGAGTTTGAGCAGGGCACATATCGCTTCTTCGATTATGAGAGTACA
TGGATGAACCGTCGCAAGGCTGACTTCAAGTTCGTCTACAAATACTTGGA
AGATGACCTGTAAATGACGTCCCGGAAGACGCAGCAGGAGATTGACAAGA
CCTTCAAGAAGGTCGCTGAAGGCATTCAAACATTCGAGGGTATCTATGAG
AAGATCCGGTCAACATCAAATATCACGCAACGGGATAAGCTCGAGGAGAA
CCTGAAACGGGAGATCAAGAAGTTACAACGATATCGTGACCAAATCAAGT
CATGGGCATCAGGAAACGAGGTCAAGGATAAGGGGCCGCTGCTAGAGCAG
CGCAGGGCCATTGAGACTTGCATGGAACAGTTCAAGGCAGTAGAGAAGGA
GATGAAGACAAAGGCATATTCGAAAGAAGGGTTGTCGGCTGCATCGAGAT
TAGATCCTAAAGAGAAGGAGAAGGTCGAGACTTGCGACTTCCTATCGAAT
ATGGTGGACGAGCTGCAACAGAAGATCGAGGCCTTCGAAGCGGAAGAGGA
AACGCTTCACATGCAAATGAAGAAAGGCAAGAAGGACGTGGCCAAGACGA
ATCGCCTATCAGACCTTTCACGCTTAACAGAACGCCATAAGTGGCATGTC
AATAAGTTGGAACTGTTGCTACGGTCGCTGCAGAACGGCAACCTCGAAGT
TGCTCAGGTGCTGGATATCAAGGAAAGCATTAAGTACTATGTGGAGGATG
GGCACAACATTGACTACTCTGGTGAGGATGAAACCTTGTACGACGACCTG
AACCTGGACAACGAGGCAGAGGTGCAGTTCGGCATGACAGGGGACAACGA
TAAAGTATCCTCGCAAGACACCCAGTCGATCCAAGACGAGGAGCCGGAAA
TCAAGCCCAAGGTCAACAAGGGTGAGAGCGCAGGATTACGAAGGCCATCT
GCACAGATGAAGTCCCCTCTACCTGTGTTAGCAACACTTCATCCGTCGAC
CTCCACGACTGCCGCCTCAGGCATGAAACCCGCACCACCGCCTACCCGCC
TCCCCGGGGAAACACTCAAGTACGCGTCCGCTGCCGCTGCCGCTGCTGCA
AGTGACAAGAACGGGGTGGGCATTGCACCACTTCCGCCACCTCCAGGCGC
AAGCCCCGCTTTCCCGCACGCTGTGCCTGCAAACAAAGCTTCAGCCACTG
CCTCGCCGAGCGTTGCATCGGTACAACCTACTACATCCAAGGCCGCGCCG
GTCCTCACGATAGCGGCGGAGGACATCACCGGTGCACGATCAAAAACACC
TTCTGTCAGCCCCAACGTGGCTGCTGCGAGCACATCGTCACATACAATGG
ATAAAGTTGAGGCCCCAGCAGCTGCCAAGGAGCAACCTGCGACGAACGGT
GAGGCGACGAGTAAGCAAGAGGAGCAGGAGCAGGAGCAGGAGAGCGAGGA
ATCGATCTTCCACCTCCCTCCCGGCCTGCAGGATCTTATTCAGTCGTTCG
AGGTCACGAGGTCCCGGGCGTCAGCAAGCGCAGCCAACGCCTCCCCGTCA
GTGCAGCGCATGCTTGCAACATCCCTCGCGAACTGCCCGGAGCCTGCCGA
TGCGGAGAAGCCTCGTCATTACAAGCCTCAAAACCCTTACAATACGCCTT
TATACTATCCTCAGGAACCGCTCTCCATCTTCGATGATCCGCGCTTGTAC
GAAACCGGGCGCATCGACACGGATACACTGTTCTACCTGTTCTACTACCG
ACAAGGCAGTTACCAACAGTATCTCGCGGCCAAGGCGTTGAAGAACCAGA
GTTGGCGCTTCCACAAACAGTATCAAACCTGGTTCCAACGTCACGAGGAG
CCGAAGACGATCACGGAGGAGTTTGAGCAGGGCACATATCGCTTCTTCGA
TTATGAGAGTACATGGATGAACCGTCGCAAGGCTGACTTCAAGTTCGTCT
ACAAATACTTGGAAGATGACCTGTAAATGACGTCCCGGAAGACGCAGCAG
GAGATTGACAAGACCTTCAAGAAGGTCGCTGAAGGCATTCAAACATTCGA
GGGTATCTATGAGAAGATCCGGTCAACATCAAATATCACGCAACGGGATA
AGCTCGAGGAGAACCTGAAACGGGAGATCAAGAAGTTACAACGATATCGT
GACCAAATCAAGTCATGGGCATCAGGAAACGAGGTCAAGGATAAGGGGCC
GCTGCTAGAGCAGCGCAGGGCCATTGAGACTTGCATGGAACAGTTCAAGG
CAGTAGAGAAGGAGATGAAGACAAAGGCATATTCGAAAGAAGGGTTGTCG
GCTGCATCGAGATTAGATCCTAAAGAGAAGGAGAAGGTCGAGACTTGCGA
CTTCCTATCGAATATGGTGGACGAGCTGCAACAGAAGATCGAGGCCTTCG
AAGCGGAAGAGGAAACGCTTCACATGCAAATGAAGAAAGGCAAGAAGGAC
GTGGCCAAGACGAATCGCCTATCAGACCTTTCACGCTTAACAGAACGCCA
TAAGTGGCATGTCAATAAGTTGGAACTGTTGCTACGGTCGCTGCAGAACG
GCAACCTCGAAGTTGCTCAGGTGCTGGATATCAAGGAAAGCATTAAGTAC
TATGTGGAGGATGGGCACAACATTGACTACTCTGGTGAGGATGAAACCTT
GTACGACGACCTGAACCTGGACAACGAGGCAGAGGTGCAGTTCGGCATGA
CAGGGGACAACGATAAAGTATCCTCGCAAGACACCCAGTCGATCCAAGAC
GAGGAGCCGGAAATCAAGCCCAAGGTCAACAAGGGTGAGAGCGCAGGATT
ACGAAGGCCATCTGCACAGATGAAGTCCCCTCTACCTGTGTTAGCAACAC
TTCATCCGTCGACCTCCACGACTGCCGCCTCAGGCATGAAACCCGCACCA
CCGCCTACCCGCCTCCCCGGGGAAACACTCAAGTACGCGTCCGCTGCCGC
TGCCGCTGCTGCAAGTGACAAGAACGGGGTGGGCATTGCACCACTTCCGC
CACCTCCAGGCGCAAGCCCCGCTTTCCCGCACGCTGTGCCTGCAAACAAA
GCTTCAGCCACTGCCTCGCCGAGCGTTGCATCGGTACAACCTACTACATC
CAAGGCCGCGCCGGTCCTCACGATAGCGGCGGAGGACATCACCGGTGCAC
GATCAAAAACACCTTCTGTCAGCCCCAACGTGGCTGCTGCGAGCACATCG
TCACATACAATGGATAAAGTTGAGGCCCCAGCAGCTGCCAAGGAGCAACC
TGCGACGAACGGTGAGGCGACGAGTAAGCAAGAGGAGCAGGAGCAGGAGC
AGGAGAGCGAGGAATCGATCTTCCACCTCCCTCCCGGCCTGCAGGATCTT
ATTCAGTCGTTCGAGGTCACGAGGTCCCGGGCGTCAGCAAGCGCAGCCAA
CGCCTCCCCGTCAGTGCAGCGCATGCTTGCAACATCCCTCGCGAACTGCC
CGGAGCCTGCCGATGCGGAGAAGCCTCGTCATTACAAGCCTCAAAACCCT
TACAATACGCCTTTATACTATCCTCAGGAACCGCTCTCCATCTTCGATGA
TCCGCGCTTGTACGAAACCGGGCGCATCGACACGGATACACTGTTCTACC
TGTTCTACTACCGACAAGGCAGTTACCAACAGTATCTCGCGGCCAAGGCG
TTGAAGAACCAGAGTTGGCGCTTCCACAAACAGTATCAAACCTGGTTCCA
ACGTCACGAGGAGCCGAAGACGATCACGGAGGAGTTTGAGCAGGGCACAT
ATCGCTTCTTCGATTATGAGAGTACATGGATGAACCGTCGCAAGGCTGAC
TTCAAGTTCGTCTACAAATACTTGGAAGATGACCTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0030015CCR4-NOT core complex
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_47390ATCC64974_47390Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_47390-T1.exon1ATCC64974_47390-T1.exon1Aspergillus niger N402exon
ATCC64974_47390-T1.exon2ATCC64974_47390-T1.exon2Aspergillus niger N402exon
ATCC64974_47390-T1.exon3ATCC64974_47390-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_47390-T1.cdsATCC64974_47390-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_47390-T1ATCC64974_47390-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007282
DBxrefInterPro:IPR007207
DBxrefInterPro:IPR012270
DBxrefInterPro:IPR038635
DBxrefPFAM:PF04065
DBxrefPFAM:PF04153
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:1321310..1323302 +
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