You are here

Home

ATCC64974_47680-T1, ATCC64974_47680-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_47680-T1
Unique NameATCC64974_47680-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:1414796..1415699+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_47680-T1 ID=ATCC64974_47680-T1|Name=ATCC64974_47680-T1|organism=Aspergillus niger N402|type=mRNA|length=904bp|location=Sequence derived from alignment at OGUI01000007.1:1414796..1415699+ (Aspergillus niger N402)
ATGTCAGAGCCCTTTCATCCCGCGAAATCACCGGCCCTCCCGGTCGTGGA
ATCCTCCACCAACACCAAATCCCCTCACTCTCAAGAGACGAAAGTGCGCC
GGTTAAGAGAAACTGTCGATAGCAATTATGCCGACATCATCTGTATCATT
CTCTGCTTCGTCACGGGGCTTTGCGACAGCTCCGCATTCAATGCGTGGTC
ATGCTTCTTAGCTATGCAAACCGGTACGTCTATCTTATCCCCTTATCCTA
CTACACCACTTCCCTCCTATTACTCACATACTGATAATATCCTTGAATTA
AACAGGAAACACCGTCGTCCTCGGCCTCGGCGCCGCCTCCCTCCCCAGAG
ATGACAGCGACAGCTGGCTAAAATCCCTCGTCTCGATCGCCAGCTTCGTC
ACGGGTTCATTCACATTCAGCTTCGTCGGACGACACCTCGGTCCCGCCCG
TCGCGGCACACTTTTCGCCTCATTCATGGTGCAAGTGATTCTCATCGTGA
TCGCCGTCTCCCTGATACAGTCCGGACTTATCGCGGAATCCGAAGATGTC
GTCACCTCCAAACACCATGGCGGCAAGCTCCTAGAGCTGATTCCTATTGG
CTTGCTGGCCTTCCAGTCCTCCGGGTCTATCAATAGTACGCGCTCGTTAG
GTTTCAATGAGATTCCGAGTGTTGTTATCACGAGCGTGTATTTTGATATT
GCTTCCGATAAGAATATCCTCGCTGTGCAGAATGTTAAAAGGAATAGGAG
GGTTGCTGGGGTGGTGGCGCTGTTGATTGGGGCGATTGTGGGTGGGTGGT
TGAATAGGAGTGCTGGGGGTATGGCGTCGACTTTTTGGTTGGCGGCGGGG
ATTAAGTTCGCGATTGGGTTGGGGTGGTTGTTTTGGATGCCTGTTAGGGG
GTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:1414796..1415699+

>ATCC64974_47680-T1 ID=ATCC64974_47680-T1|Name=ATCC64974_47680-T1|organism=Aspergillus niger N402|type=CDS|length=1644bp|location=Sequence derived from alignment at OGUI01000007.1:1414796..1415699+ (Aspergillus niger N402)
ATGTCAGAGCCCTTTCATCCCGCGAAATCACCGGCCCTCCCGGTCGTGGA
ATCCTCCACCAACACCAAATCCCCTCACTCTCAAGAGACGAAAGTGCGCC
GGTTAAGAGAAACTGTCGATAGCAATTATGCCGACATCATCTGTATCATT
CTCTGCTTCGTCACGGGGCTTTGCGACAGCTCCGCATTCAATGCGTGGTC
ATGCTTCTTAGCTATGCAAACCGGAAACACCGTCGTCCTCGGCCTCGGCG
CCGCCTCCCTCCCCAGAGATGACAGCGACAGCTGGCTAAAATCCCTCGTC
TCGATCGCCAGCTTCGTCACGGGTTCATTCACATTCAGCTTCGTCGGACG
ACACCTCGGTCCCGCCCGTCGCGGCACACTTTTCGCCTCATTCATGGTGC
AAGTGATTCTCATCGTGATCGCCGTCTCCCTGATACAGTCCGGACTTATC
GCGGAATCCGAAGATGTCGTCACCTCCAAACACCATGGCGGCAAGCTCCT
AGAGCTGATTCCTATTGGCTTGCTGGCCTTCCAGTCCTCCGGGTCTATCA
ATAGTACGCGCTCGTTAGGTTTCAATGAGATTCCGAGTGTTGTTATCACG
AGCGTGTATTTTGATATTGCTTCCGATAAGAATATCCTCGCTGTGCAGAA
TGTTAAAAGGAATAGGAGGGTTGCTGGGGTGGTGGCGCTGTTGATTGGGG
CGATTGTGGGTGGGTGGTTGAATAGGAGTGCTGGGGGTATGGCGTCGACT
TTTTGGTTGGCGGCGGGGATTAAGTTCGCGATTGGGTTGGGGTGGTTGTT
TTGGATGCCTGTTAGGGGGTAGATGTCAGAGCCCTTTCATCCCGCGAAAT
CACCGGCCCTCCCGGTCGTGGAATCCTCCACCAACACCAAATCCCCTCAC
TCTCAAGAGACGAAAGTGCGCCGGTTAAGAGAAACTGTCGATAGCAATTA
TGCCGACATCATCTGTATCATTCTCTGCTTCGTCACGGGGCTTTGCGACA
GCTCCGCATTCAATGCGTGGTCATGCTTCTTAGCTATGCAAACCGGAAAC
ACCGTCGTCCTCGGCCTCGGCGCCGCCTCCCTCCCCAGAGATGACAGCGA
CAGCTGGCTAAAATCCCTCGTCTCGATCGCCAGCTTCGTCACGGGTTCAT
TCACATTCAGCTTCGTCGGACGACACCTCGGTCCCGCCCGTCGCGGCACA
CTTTTCGCCTCATTCATGGTGCAAGTGATTCTCATCGTGATCGCCGTCTC
CCTGATACAGTCCGGACTTATCGCGGAATCCGAAGATGTCGTCACCTCCA
AACACCATGGCGGCAAGCTCCTAGAGCTGATTCCTATTGGCTTGCTGGCC
TTCCAGTCCTCCGGGTCTATCAATAGTACGCGCTCGTTAGGTTTCAATGA
GATTCCGAGTGTTGTTATCACGAGCGTGTATTTTGATATTGCTTCCGATA
AGAATATCCTCGCTGTGCAGAATGTTAAAAGGAATAGGAGGGTTGCTGGG
GTGGTGGCGCTGTTGATTGGGGCGATTGTGGGTGGGTGGTTGAATAGGAG
TGCTGGGGGTATGGCGTCGACTTTTTGGTTGGCGGCGGGGATTAAGTTCG
CGATTGGGTTGGGGTGGTTGTTTTGGATGCCTGTTAGGGGGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_47680ATCC64974_47680Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_47680-T1.exon1ATCC64974_47680-T1.exon1Aspergillus niger N402exon
ATCC64974_47680-T1.exon2ATCC64974_47680-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_47680-T1.cdsATCC64974_47680-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_47680-T1ATCC64974_47680-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR010699
DBxrefPFAM:PF06912
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:1414796..1415699 +
Powered by Drupal