You are here

Home

ATCC64974_47880-T1, ATCC64974_47880-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_47880-T1
Unique NameATCC64974_47880-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:1472591..1473151-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_47880-T1 ID=ATCC64974_47880-T1|Name=ATCC64974_47880-T1|organism=Aspergillus niger N402|type=mRNA|length=561bp|location=Sequence derived from alignment at OGUI01000007.1:1472591..1473151- (Aspergillus niger N402)
ATGGCAGATCACCTCCAAGCCTCCGTCTCATCCCTCGGATCCTCCCTCCA
ACTCCTCGATTCCTCTATCTCCACCCTCGACTCCGGCATTAGCGACTTTC
CCCGACTATGCAAGGTCTTGCAAACAACCCGAGTACGTACCCCTGCCTTC
AATATCAAACACTAAATCTAACCCCAATAGCATTTTGAACTTCTCCCCGA
ACCCACTCTGCGCGAAGCCCAACAATCCCTCCTAGATGAAATCACTCCCA
GCATCGCACATCTGCTCTCACTAGCATCGAATCATGTGGAGAAGCTCTCG
CGACGAGAACAAGGCCTGAGAGCTAAATGCGAGCTGCAAGAGGGAAGAAT
GTATTCGAATGAGAGCCGTCAGCCTTCGAGGATGCGTAGCGCTTTTGGCG
ATCGACTGCAGAGCGCGGGCGCTTCGGGGAAGGCTGCGAAGGCGGCGGAG
CTGAAGAGACTGATGCAGAAGAAGGAACGGTTGCAGTATGCGGTGGAGCG
GTTGGAGCTGCAGAGTACGCAGAGGGAGAGGCAGTTGAGGAAGAGTATGG
CGTTTCACTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:1472591..1473151-

>ATCC64974_47880-T1 ID=ATCC64974_47880-T1|Name=ATCC64974_47880-T1|organism=Aspergillus niger N402|type=CDS|length=1026bp|location=Sequence derived from alignment at OGUI01000007.1:1472591..1473151- (Aspergillus niger N402)
CATTTTGAACTTCTCCCCGAACCCACTCTGCGCGAAGCCCAACAATCCCT
CCTAGATGAAATCACTCCCAGCATCGCACATCTGCTCTCACTAGCATCGA
ATCATGTGGAGAAGCTCTCGCGACGAGAACAAGGCCTGAGAGCTAAATGC
GAGCTGCAAGAGGGAAGAATGTATTCGAATGAGAGCCGTCAGCCTTCGAG
GATGCGTAGCGCTTTTGGCGATCGACTGCAGAGCGCGGGCGCTTCGGGGA
AGGCTGCGAAGGCGGCGGAGCTGAAGAGACTGATGCAGAAGAAGGAACGG
TTGCAGTATGCGGTGGAGCGGTTGGAGCTGCAGAGTACGCAGAGGGAGAG
GCAGTTGAGGAAGAGTATGGCGTTTCACTAGATGGCAGATCACCTCCAAG
CCTCCGTCTCATCCCTCGGATCCTCCCTCCAACTCCTCGATTCCTCTATC
TCCACCCTCGACTCCGGCATTAGCGACTTTCCCCGACTATGCAAGGTCTT
GCAAACAACCCGACATTTTGAACTTCTCCCCGAACCCACTCTGCGCGAAG
CCCAACAATCCCTCCTAGATGAAATCACTCCCAGCATCGCACATCTGCTC
TCACTAGCATCGAATCATGTGGAGAAGCTCTCGCGACGAGAACAAGGCCT
GAGAGCTAAATGCGAGCTGCAAGAGGGAAGAATGTATTCGAATGAGAGCC
GTCAGCCTTCGAGGATGCGTAGCGCTTTTGGCGATCGACTGCAGAGCGCG
GGCGCTTCGGGGAAGGCTGCGAAGGCGGCGGAGCTGAAGAGACTGATGCA
GAAGAAGGAACGGTTGCAGTATGCGGTGGAGCGGTTGGAGCTGCAGAGTA
CGCAGAGGGAGAGGCAGTTGAGGAAGAGTATGGCGTTTCACTAGATGGCA
GATCACCTCCAAGCCTCCGTCTCATCCCTCGGATCCTCCCTCCAACTCCT
CGATTCCTCTATCTCCACCCTCGACTCCGGCATTAGCGACTTTCCCCGAC
TATGCAAGGTCTTGCAAACAACCCGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042729DASH complex
GO:0005876spindle microtubule
Vocabulary: Biological Process
TermDefinition
GO:0008608attachment of spindle microtubules to kinetochore
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_47880ATCC64974_47880Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_47880-T1ATCC64974_47880-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_47880-T1.cdsATCC64974_47880-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_47880-T1.exon2ATCC64974_47880-T1.exon2Aspergillus niger N402exon
ATCC64974_47880-T1.exon1ATCC64974_47880-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR013251
DBxrefPFAM:PF08287
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:1472591..1473151 -
Powered by Drupal