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ATCC64974_47890-T1, ATCC64974_47890-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_47890-T1
Unique NameATCC64974_47890-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:1474834..1475302+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_47890-T1 ID=ATCC64974_47890-T1|Name=ATCC64974_47890-T1|organism=Aspergillus niger N402|type=mRNA|length=469bp|location=Sequence derived from alignment at OGUI01000007.1:1474834..1475302+ (Aspergillus niger N402)
ATGTCGCAGTTCCGGTCCAAGATCCTCGACCTCGGCGGGTTCATCAACCC
CCGTGTTGTCCGCGACCACACCAAGCGGAAGGTTTTCGAGCAATTCGAGC
CGGAACGGTAATTTCAACCTACCTGCTGAAGGTCGAGCCGAACAGCTACT
AATAGATTTATTCTGATATATAGCCAAGCTCTTCGCTACGTGATCCACAA
CACTTCCCTCCCCCAGCGTGTGCGCGCCCAGGCCCAGCTCCAGCTCGCTT
CCATGCACGCCTACACTCGCTCGACGCAGATCAAGAACCGCTGTGTGGCG
GGTGGTGTTCCTCGCAGTGTTATCCGGGCGTTTAGACTTGGTAGAGTAAG
TTTATCCCTAGGGAGGGGTCTTTGGTTGGATAGACACTAATAGTTGGTTT
GTGCAGTACCAATTCCGTCAGCAGGCGCTGGCTGGTGAACTCCCCGGTGT
GAAGAAGGCCAGTTGGTAA
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Coding sequence (CDS) from alignment at OGUI01000007.1:1474834..1475302+

>ATCC64974_47890-T1 ID=ATCC64974_47890-T1|Name=ATCC64974_47890-T1|organism=Aspergillus niger N402|type=CDS|length=1026bp|location=Sequence derived from alignment at OGUI01000007.1:1474834..1475302+ (Aspergillus niger N402)
ATGTCGCAGTTCCGGTCCAAGATCCTCGACCTCGGCGGGTTCATCAACCC
CCGTGTTGTCCGCGACCACACCAAGCGGAAGGTTTTCGAGCAATTCGAGC
CGGAACGCCAAGCTCTTCGCTACGTGATCCACAACACTTCCCTCCCCCAG
CGTGTGCGCGCCCAGGCCCAGCTCCAGCTCGCTTCCATGCACGCCTACAC
TCGCTCGACGCAGATCAAGAACCGCTGTGTGGCGGGTGGTGTTCCTCGCA
GTGTTATCCGGGCGTTTAGACTTGGTAGATACCAATTCCGTCAGCAGGCG
CTGGCTGGTGAACTCCCCGGTGTGAAGAAGGCCAGTTGGTAAATGTCGCA
GTTCCGGTCCAAGATCCTCGACCTCGGCGGGTTCATCAACCCCCGTGTTG
TCCGCGACCACACCAAGCGGAAGGTTTTCGAGCAATTCGAGCCGGAACGC
CAAGCTCTTCGCTACGTGATCCACAACACTTCCCTCCCCCAGCGTGTGCG
CGCCCAGGCCCAGCTCCAGCTCGCTTCCATGCACGCCTACACTCGCTCGA
CGCAGATCAAGAACCGCTGTGTGGCGGGTGGTGTTCCTCGCAGTGTTATC
CGGGCGTTTAGACTTGGTAGATACCAATTCCGTCAGCAGGCGCTGGCTGG
TGAACTCCCCGGTGTGAAGAAGGCCAGTTGGTAAATGTCGCAGTTCCGGT
CCAAGATCCTCGACCTCGGCGGGTTCATCAACCCCCGTGTTGTCCGCGAC
CACACCAAGCGGAAGGTTTTCGAGCAATTCGAGCCGGAACGCCAAGCTCT
TCGCTACGTGATCCACAACACTTCCCTCCCCCAGCGTGTGCGCGCCCAGG
CCCAGCTCCAGCTCGCTTCCATGCACGCCTACACTCGCTCGACGCAGATC
AAGAACCGCTGTGTGGCGGGTGGTGTTCCTCGCAGTGTTATCCGGGCGTT
TAGACTTGGTAGATACCAATTCCGTCAGCAGGCGCTGGCTGGTGAACTCC
CCGGTGTGAAGAAGGCCAGTTGGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_47890ATCC64974_47890Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_47890-T1.exon1ATCC64974_47890-T1.exon1Aspergillus niger N402exon
ATCC64974_47890-T1.exon2ATCC64974_47890-T1.exon2Aspergillus niger N402exon
ATCC64974_47890-T1.exon3ATCC64974_47890-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_47890-T1.cdsATCC64974_47890-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_47890-T1ATCC64974_47890-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265D7J
DBxrefInterPro:IPR001209
DBxrefPFAM:PF00253
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:1474834..1475302 +
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